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Author |
Van Oijen, M.; Höglind, M. |
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Title  |
Toward a Bayesian procedure for using process-based models in plant breeding, with application to ideotype design |
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Journal Article |
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Year |
2016 |
Publication |
Euphytica |
Abbreviated Journal |
Euphytica |
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Volume |
207 |
Issue |
3 |
Pages |
627-643 |
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Keywords |
BASGRA; cold tolerance; genotype-environment interaction; plant breeding; process-based modelling; yield stability; grassland productivity; timothy regrowth; climate-change; water-deficit; forest models; late blight; leaf-area; calibration; growth; tolerance |
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Abstract |
Process-based grassland models (PBMs) simulate growth and development of vegetation over time. The models tend to have a large number of parameters that represent properties of the plants. To simulate different cultivars of the same species, different parameter values are required. Parameter differences may be interpreted as genetic variation for plant traits. Despite this natural connection between PBMs and plant genetics, there are only few examples of successful use of PBMs in plant breeding. Here we present a new procedure by which PBMs can help design ideotypes, i.e. virtual cultivars that optimally combine properties of existing cultivars. Ideotypes constitute selection targets for breeding. The procedure consists of four steps: (1) Bayesian calibration of model parameters using data from cultivar trials, (2) Estimating genetic variation for parameters from the combination of cultivar-specific calibrated parameter distributions, (3) Identifying parameter combinations that meet breeding objectives, (4) Translating model results to practice, i.e. interpreting parameters in terms of practical selection criteria. We show an application of the procedure to timothy (Phleum pratense L.) as grown in different regions of Norway. |
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2016-10-31 |
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0014-2336 |
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CropM, ft_macsur |
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MA @ admin @ |
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4820 |
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Kipling, R.P.; Topp, C.F.E.; Bannink, A.; Bartley, D.J.; Blanco-Penedo, I.; Cortignani, R.; del Prado, A.; Dono, G.; Faverdin, P.; Graux, A.-I.; Hutchings, N.J.; Lauwers, L.; Gulzari, S.O.; Reidsma, P.; Rolinski, S.; Ruiz-Ramos, M.; Sandars, D.L.; Sandor, R.; Schoenhart, M.; Seddaiu, G.; van Middelkoop, J.; Shrestha, S.; Weindl, I.; Eory, V. |
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Title |
To what extent is climate change adaptation a novel challenge for agricultural modellers |
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Journal Article |
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Year |
2019 |
Publication |
Environmental Modelling & Software |
Abbreviated Journal |
Env. Model. Softw. |
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Volume |
120 |
Issue |
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Pages |
Unsp 104492 |
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Keywords |
Adaptation; Agricultural modelling; Climate change; Research challenges; greenhouse-gas emissions; farm-level adaptation; land-use; food; security; adapting agriculture; livestock production; decision-making; change impacts; dairy farms; crop |
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Abstract |
Modelling is key to adapting agriculture to climate change (CC), facilitating evaluation of the impacts and efficacy of adaptation measures, and the design of optimal strategies. Although there are many challenges to modelling agricultural CC adaptation, it is unclear whether these are novel or, whether adaptation merely adds new motivations to old challenges. Here, qualitative analysis of modellers’ views revealed three categories of challenge: Content, Use, and Capacity. Triangulation of findings with reviews of agricultural modelling and Climate Change Risk Assessment was then used to highlight challenges specific to modelling adaptation. These were refined through literature review, focussing attention on how the progressive nature of CC affects the role and impact of modelling. Specific challenges identified were: Scope of adaptations modelled, Information on future adaptation, Collaboration to tackle novel challenges, Optimisation under progressive change with thresholds, and Responsibility given the sensitivity of future outcomes to initial choices under progressive change. |
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2020-02-14 |
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1364-8152 |
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LiveM, ft_macsur |
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MA @ admin @ |
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5223 |
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Conradt, T.; Wechsung, F.; Bronstert, A. |
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Title |
Three perceptions of the evapotranspiration landscape: comparing spatial patterns from a distributed hydrological model, remotely sensed surface temperatures, and sub-basin water balances |
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Journal Article |
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Year |
2013 |
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Hydrology and Earth System Sciences |
Abbreviated Journal |
Hydrol. Earth System Sci. |
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17 |
Issue |
7 |
Pages |
2947-2966 |
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Keywords |
senegal river-basin; data assimilation; sensing data; regional evapotranspiration; intercomparison project; environmental-models; oklahoma experiments; solar-radiation; satellite data; scale |
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A problem encountered by many distributed hydrological modelling studies is high simulation errors at interior gauges when the model is only globally calibrated at the outlet. We simulated river runoff in the Elbe River basin in central Europe (148 268 km(2)) with the semi-distributed eco-hydrological model SWIM (Soil and Water Integrated Model). While global parameter optimisation led to Nash-Sutcliffe efficiencies of 0.9 at the main outlet gauge, comparisons with measured runoff series at interior points revealed large deviations. Therefore, we compared three different strategies for deriving sub-basin evapotranspiration: (1) modelled by SWIM without any spatial calibration, (2) derived from remotely sensed surface temperatures, and (3) calculated from long-term precipitation and discharge data. The results show certain consistencies between the modelled and the remote sensing based evapotranspiration rates, but there seems to be no correlation between remote sensing and water balance based estimations. Subsequent analyses for single sub-basins identify amongst others input weather data and systematic error amplification in inter-gauge discharge calculations as sources of uncertainty. The results encourage careful utilisation of different data sources for enhancements in distributed hydrological modelling. |
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1607-7938 |
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CropM |
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MA @ admin @ |
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4485 |
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Refsgaard, J.C.; Arnbjerg-Nielsen, K.; Drews, M.; Halsnaes, K.; Jeppesen, E.; Madsen, H.; Markandya, A.; Olesen, J.E.; Porter, J.R.; Christensen, J.H. |
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Title |
The role of uncertainty in climate change adaptation strategies – a Danish water management example |
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Journal Article |
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Year |
2013 |
Publication |
Mitigation and Adaptation Strategies for Global Change |
Abbreviated Journal |
Mitig. Adapt. Strateg. Glob. Change |
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18 |
Issue |
3 |
Pages |
337-359 |
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Keywords |
Climate change; Adaptation; Uncertainty; Risk; Water sectors; Multi-disciplinary; change impacts; global change; winter-wheat; models; scenarios; ensembles; denmark; vulnerability; community; knowledge |
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We propose a generic framework to characterize climate change adaptation uncertainty according to three dimensions: level, source and nature. Our framework is different, and in this respect more comprehensive, than the present UN Intergovernmental Panel on Climate Change (IPCC) approach and could be used to address concerns that the IPCC approach is oversimplified. We have studied the role of uncertainty in climate change adaptation planning using examples from four Danish water related sectors. The dominating sources of uncertainty differ greatly among issues; most uncertainties on impacts are epistemic (reducible) by nature but uncertainties on adaptation measures are complex, with ambiguity often being added to impact uncertainties. Strategies to deal with uncertainty in climate change adaptation should reflect the nature of the uncertainty sources and how they interact with risk level and decision making: (i) epistemic uncertainties can be reduced by gaining more knowledge; (ii) uncertainties related to ambiguity can be reduced by dialogue and knowledge sharing between the different stakeholders; and (iii) aleatory uncertainty is, by its nature, non-reducible. The uncertainty cascade includes many sources and their propagation through technical and socio-economic models may add substantially to prediction uncertainties, but they may also cancel each other. Thus, even large uncertainties may have small consequences for decision making, because multiple sources of information provide sufficient knowledge to justify action in climate change adaptation. |
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1381-2386 1573-1596 |
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CropM, ftnotmacsur |
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MA @ admin @ |
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4613 |
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Author |
Mandryk, M.; Reidsma, P.; Kanellopoulos, A.; Groot, J.C.J.; van Ittersum, M.K. |
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Title |
The role of farmers’ objectives in current farm practices and adaptation preferences: a case study in Flevoland, the Netherlands |
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Journal Article |
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Year |
2014 |
Publication |
Regional Environmental Change |
Abbreviated Journal |
Reg Environ Change |
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Volume |
14 |
Issue |
4 |
Pages |
1463-1478 |
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Keywords |
multi-criteria decision-making; multi-objective optimization; agriculture; arable farm; vegetable farms; climate-change; south uruguay; land-use; design; agriculture; model; management; options; systems |
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Abstract |
The diversity in farmers’ objectives and responses to external drivers is usually not considered in integrated assessment studies that investigate impacts and adaptation to climate and socio-economic change. Here, we present an approach to assess how farmers’ stated objectives relate to their currently implemented practices and to preferred adaptation options, and we discuss what this implies for assessments of future changes. We based our approach on a combination of multi-criteria decision-making methods. We consistently assessed the importance of farmers’ objectives and adaptation preferences from what farmers say (based on interviews), from what farmers actually do (by analysing current farm performance) and from what farmers want (through a selected alternative farm plan). Our study was performed for six arable farms in Flevoland, a province in the Netherlands. Based on interviews with farmers, we reduced the long list of possible objectives to the most important ones. The objectives we assessed included maximization of economic result and soil organic matter, and minimization of gross margin variance, working hours and nitrogen balance. In our sample, farmers’ stated preferences in objectives were often not fully reflected in realized farming practices. Adaptation preferences of farmers largely resembled their current performance, but generally involved a trend towards stated preferences. Our results suggest that in Flevoland, although farmers do have more objectives, in practical decision-making they focus on economic result maximization, while for strategic decision-making they account for objectives influencing long-term performance and indicators associated with sustainability, in this case soil organic matter. |
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2016-10-31 |
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1436-3798 1436-378x |
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CropM |
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MA @ admin @ |
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4794 |
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