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Ruiz-Ramos, M., Rodriguez, A., Dosio, A., Goodess, C. M., Harpham, C., Minguez, M. I., et al. (2016). Comparing correction methods of RCM outputs for improving crop impact projections in the Iberian Peninsula for 21st century. Clim. Change, 134(1-2), 283–297.
Abstract: Assessment of climate change impacts on crops in regions of complex orography such as the Iberian Peninsula (IP) requires climate model output which is able to describe accurately the observed climate. The high resolution of output provided by Regional Climate Models (RCMs) is expected to be a suitable tool to describe regional and local climatic features, although their simulation results may still present biases. For these reasons, we compared several post-processing methods to correct or reduce the biases of RCM simulations from the ENSEMBLES project for the IP. The bias-corrected datasets were also evaluated in terms of their applicability and consequences in improving the results of a crop model to simulate maize growth and development at two IP locations, using this crop as a reference for summer cropping systems in the region. The use of bias-corrected climate runs improved crop phenology and yield simulation overall and reduced the inter-model variability and thus the uncertainty. The number of observational stations underlying each reference observational dataset used to correct the bias affected the correction performance. Although no single technique showed to be the best one, some methods proved to be more adequate for small initial biases, while others were useful when initial biases were so large as to prevent data application for impact studies. An initial evaluation of the climate data, the bias correction/reduction method and the consequences for impact assessment would be needed to design the most robust, reduced uncertainty ensemble for a specific combination of location, crop, and crop management.
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Rusu, T. (2016). Impacts of climate change on agricultural technology management in the Transylvanian Plain, Romania. In Journal of Earth Science & Climatic Change (Vol. 7 (5), Suppl. 96).
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Bannink, A., van Lingen, H. J., Ellis, J. L., France, J., & Dijkstra, J. (2016). The contribution of mathematical modeling to understanding dynamic aspects of rumen metabolism. Frontiers in Microbiology, 7, 1820.
Abstract: All mechanistic rumen models cover the main drivers of variation in rumen function, which are feed intake, the differences between feedstuffs and feeds in their intrinsic rumen degradation characteristics, and fractional outflow rate of fluid and particulate matter. Dynamic modeling approaches are best suited to the prediction of more nuanced responses in rumen metabolism, and represent the dynamics of the interactions between substrates and micro-organisms and inter-microbial interactions. The concepts of dynamics are discussed for the case of rumen starch digestion as influenced by starch intake rate and frequency of feed intake, and for the case of fermentation of fiber in the large intestine. Adding representations of new functional classes of micro-organisms (i.e., with new characteristics from the perspective of whole rumen function) in rumen models only delivers new insights if complemented by the dynamics of their interactions with other functional classes. Rumen fermentation conditions have to be represented due to their profound impact on the dynamics of substrate degradation and microbial metabolism. Although the importance of rumen pH is generally acknowledged, more emphasis is needed on predicting its variation as well as variation in the processes that underlie rumen fluid dynamics. The rumen wall has an important role in adapting to rapid changes in the rumen environment, clearing of volatile fatty acids (VFA), and maintaining rumen pH within limits. Dynamics of rumen wall epithelia and their role in VFA absorption needs to be better represented in models that aim to predict rumen responses across nutritional or physiological states. For a detailed prediction of rumen N balance there is merit in a dynamic modeling approach compared to the static approaches adopted in current protein evaluation systems. Improvement is needed on previous attempts to predict rumen VFA profiles, and this should be pursued by introducing factors that relate more to microbial metabolism. For rumen model construction, data on rumen microbiomes are preferably coupled with knowledge consolidated in rumen models instead of relying on correlations with rather general aspects of treatment or animal. This helps to prevent the disregard of basic principles and underlying mechanisms of whole rumen function.
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Boote, K. J., Porter, C., Jones, J. W., Thorburn, P. J., Kersebaum, K. C., Hoogenboom, G., et al. (2016). Sentinel site data for crop model improvement—definition and characterization. In J. L. Hatfield, & D. Fleisher (Eds.), Improving Modeling Tools to Assess Climate Change Effects on Crop Response. Advances in Agricultural Systems Modeling, 7.
Abstract: Crop models are increasingly being used to assess the impacts of future climate change on production and food security. High quality, site-specific data on weather, soils, management, and cultivar are needed for those model applications. Also important is that model development, evaluation, improvement, and calibration require additional high quality, site-specific measurements on crop yield, growth, phenology, and ancillary traits. We review the evolution of minimum data set requirements for agroecosystem modeling and then describe the characteristics and ranking of sentinel site data needed for crop model improvement, calibration, and application. We in the Agricultural Model Intercomparison and Improvement Project (AgMIP), propose to rank sentinel site data sets as platinum, gold, silver, and copper, based on the degree of true site-specific measurement of weather, soils, management, crop yield, as well as the quality, comprehensiveness, quantity, accuracy, and value. For example, to be ranked platinum, the weather and soil characterization must be measured on-site, and all management inputs must be known. Dataset ranking will be lower for weather measured off-site or soil traits estimated from soil mapping. Ranking also depends on the intended purposes for data use. If the purpose is to improve a crop model for response to water or N, then additional observations are necessary, such as initial soil water, initial soil inorganic N, and plant N uptake during the growing season to be ranked platinum. Rankings are enhanced by presence of multiple treatments and sites. Examples of platinum-, gold-, and silver-quality data sets for model improvement and calibration uses are illustrated.
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Schauberger, B., Rolinski, S., & Müller, C. (2016). A network-based approach for semi-quantitative knowledge mining and its application to yield variability. Environ. Res. Lett., 11(12), 123001.
Abstract: Variability of crop yields is detrimental for food security. Under climate change its amplitude is likely to increase, thus it is essential to understand the underlying causes and mechanisms. Crop models are the primary tool to project future changes in crop yields under climate change. Asystematic overview of drivers and mechanisms of crop yield variability (YV) can thus inform crop model development and facilitate improved understanding of climate change impacts on crop yields. Yet there is a vast body of literature on crop physiology and YV, which makes a prioritization of mechanisms for implementation in models challenging. Therefore this paper takes on a novel approach to systematically mine and organize existing knowledge from the literature. The aim is to identify important mechanisms lacking in models, which can help to set priorities in model improvement. We structure knowledge from the literature in a semi-quantitative network. This network consists of complex interactions between growing conditions, plant physiology and crop yield. We utilize the resulting network structure to assign relative importance to causes of YV and related plant physiological processes. As expected, our findings confirm existing knowledge, in particular on the dominant role of temperature and precipitation, but also highlight other important drivers of YV. More importantly, our method allows for identifying the relevant physiological processes that transmit variability in growing conditions to variability in yield. We can identify explicit targets for the improvement of crop models. The network can additionally guide model development by outlining complex interactions between processes and by easily retrieving quantitative information for each of the 350 interactions. We show the validity of our network method as a structured, consistent and scalable dictionary of literature. The method can easily be applied to many other research fields.
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