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Author |
Martre, P.; He, J.; Le Gouis, J.; Semenov, M.A. |
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Title |
In silico system analysis of physiological traits determining grain yield and protein concentration for wheat as influenced by climate and crop management |
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Journal Article |
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Year |
2015 |
Publication  |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3581-3598 |
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Keywords |
Climate; *Computer Simulation; Crops, Agricultural/*growth & development/physiology; Edible Grain/*growth & development; Models, Biological; Nitrogen/metabolism; Plant Proteins/*metabolism; Plant Transpiration; Probability; *Quantitative Trait, Heritable; Soil/chemistry; Triticum/growth & development/metabolism/*physiology; Water/chemistry; Crop growth model; genetic adaptation; grain protein concentration; grain yield; interannual variability; sensitivity analysis; wheat (Triticum aestivum L.); yield stability |
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Abstract |
Genetic improvement of grain yield (GY) and grain protein concentration (GPC) is impeded by large genotype×environment×management interactions and by compensatory effects between traits. Here global uncertainty and sensitivity analyses of the process-based wheat model SiriusQuality2 were conducted with the aim of identifying candidate traits to increase GY and GPC. Three contrasted European sites were selected and simulations were performed using long-term weather data and two nitrogen (N) treatments in order to quantify the effect of parameter uncertainty on GY and GPC under variable environments. The overall influence of all 75 plant parameters of SiriusQuality2 was first analysed using the Morris method. Forty-one influential parameters were identified and their individual (first-order) and total effects on the model outputs were investigated using the extended Fourier amplitude sensitivity test. The overall effect of the parameters was dominated by their interactions with other parameters. Under high N supply, a few influential parameters with respect to GY were identified (e.g. radiation use efficiency, potential duration of grain filling, and phyllochron). However, under low N, >10 parameters showed similar effects on GY and GPC. All parameters had opposite effects on GY and GPC, but leaf and stem N storage capacity appeared as good candidate traits to change the intercept of the negative relationship between GY and GPC. This study provides a system analysis of traits determining GY and GPC under variable environments and delivers valuable information to prioritize model development and experimental work. |
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1460-2431 (Electronic) 0022-0957 (Linking) |
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CropM, ftnotmacsur |
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MA @ admin @ |
Serial |
4567 |
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Author |
Frederiks, T.M.; Christopher, J.T.; Sutherland, M.W.; Borrell, A.K. |
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Title |
Post-head-emergence frost in wheat and barley: defining the problem, assessing the damage, and identifying resistance |
Type |
Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3487-3498 |
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Keywords |
Adaptation, Physiological; Environment; *Freezing; Hordeum/*physiology; Stress, Physiological; Triticum/*physiology; Barley; frost; reproductive frost; spring radiant frost; wheat |
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Abstract |
Radiant frost is a significant production constraint to wheat (Triticum aestivum) and barley (Hordeum vulgare), particularly in regions where spring-habit cereals are grown through winter, maturing in spring. However, damage to winter-habit cereals in reproductive stages is also reported. Crops are particularly susceptible to frost once awns or spikes emerge from the protection of the flag leaf sheath. Post-head-emergence frost (PHEF) is a problem distinct from other cold-mediated production constraints. To date, useful increased PHEF resistance in cereals has not been identified. Given the renewed interest in reproductive frost damage in cereals, it is timely to review the problem. Here we update the extent and impacts of PHEF and document current management options to combat this challenge. We clarify terminology useful for discussing PHEF in relation to chilling and other freezing stresses. We discuss problems characterizing radiant frost, the environmental conditions leading to PHEF damage, and the effects of frost at different growth stages. PHEF resistant cultivars would be highly desirable, to both reduce the incidence of direct frost damage and to allow the timing of crop maturity to be managed to maximize yield potential. A framework of potential adaptation mechanisms is outlined. Clarification of these critical issues will sharpen research focus, improving opportunities to identify genetic sources for improved PHEF resistance. |
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0022-0957 1460-2431 |
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Review |
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CropM |
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MA @ admin @ |
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4558 |
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Author |
Carabano, M.J.; Logar, B.; Bormann, J.; Minet, J.; Vanrobays, M.L.; Diaz, C.; Tychon, B.; Gengler, N.; Hammami, H. |
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Title |
Modeling heat stress under different environmental conditions |
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Journal Article |
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Year |
2016 |
Publication |
Journal of Dairy Science |
Abbreviated Journal |
J. Dairy Sci. |
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Volume |
99 |
Issue |
5 |
Pages |
3798-3814 |
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Keywords |
Holstein cattle; heat stress model; climate change; somatic-cell score; lactating dairy-cows; dry-matter intake; milk-production; temperate climate; production traits; holstein cows; cattle; yield; weather; Agriculture; Food Science & Technology |
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Renewed interest in heat stress effects on livestock productivity derives from climate change, which is expected to increase temperatures and the frequency of extreme weather events. This study aimed at evaluating the effect of temperature and humidity on milk production in highly selected dairy cattle populations across 3 European regions differing in climate and production systems to detect differences and similarities that can be used to optimize heat stress (HS) effect modeling. Milk, fat, and protein test day data from official milk recording for 1999 to 2010 in 4 Holstein populations located in the Walloon Region of Belgium (BEL), Luxembourg (LUX), Slovenia (SLO), and southern Spain (SPA) were merged with temperature and humidity data provided by the state meteorological agencies. After merging, the number of test day records/cows per trait ranged from 686,726/49,655 in SLO to 1,982,047/136,746 in BEL. Values for the daily average and maximum temperature-humidity index (THIavg and THImax) ranges for THIavg/THImax were largest in SLO (22-74/28-84) and shortest in SPA (39-76/46-83). Change point techniques were used to determine comfort thresholds, which differed across traits and climatic regions. Milk yield showed an inverted U-shaped pattern of response across the THI scale with a HS threshold around 73 THImax units. For fat and protein, thresholds were lower than for milk yield and were shifted around 6 THI units toward larger values in SPA compared with the other countries. Fat showed lower HS thresholds than protein traits in all countries. The traditional broken line model was compared with quadratic and cubic fits of the pattern of response in production to increasing heat loads. A cubic polynomial model allowing for individual variation in patterns of response and THIavg as heat load measure showed the best statistical features. Higher/lower producing animals showed less/more persistent production (quantity and quality) across the THI scale. The estimated correlations between comfort and THIavg values of 70 (which represents the upper end of the THIavg scale in BEL-LUX) were lower for BEL-LUX (0.70-0.80) than for SPA (0.83-0.85). Overall, animals producing in the more temperate climates and semi-extensive grazing systems of BEL and LUX showed HS at lower heat loads and more re-ranking across the THI scale than animals producing in the warmer climate and intensive indoor system of SPA. |
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0022-0302 |
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LiveM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
4745 |
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Author |
Vitali, A.; Felici, A.; Esposito, S.; Bernabucci, U.; Bertocchi, L.; Maresca, C.; Nardone, A.; Lacetera, N. |
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Title |
The effect of heat waves on dairy cow mortality |
Type |
Journal Article |
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Year |
2015 |
Publication |
Journal of Dairy Science |
Abbreviated Journal |
J. Dairy Sci. |
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Volume |
98 |
Issue |
7 |
Pages |
4572-4579 |
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Keywords |
Animal Welfare; Animals; Cattle; Cross-Over Studies; Female; Heat Stress Disorders/*mortality; *Hot Temperature; Italy/epidemiology; Logistic Models; *Movement; Retrospective Studies; Seasons; dairy cow; global warming; heat wave; mortality; welfare |
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This study investigated the mortality of dairy cows during heat waves. Mortality data (46,610 cases) referred to dairy cows older than 24 mo that died on a farm from all causes from May 1 to September 30 during a 6-yr period (2002-2007). Weather data were obtained from 12 weather stations located in different areas of Italy. Heat waves were defined for each weather station as a period of at least 3 consecutive days, from May 1 to September 30 (2002-2007), when the daily maximum temperature exceeded the 90th percentile of the reference distribution (1971-2000). Summer days were classified as days in heat wave (HW) or not in heat wave (nHW). Days in HW were numbered to evaluate the relationship between mortality and length of the wave. Finally, the first 3 nHW days after the end of a heat wave were also considered to account for potential prolonged effects. The mortality risk was evaluated using a case-crossover design. A conditional logistic regression model was used to calculate odds ratio and 95% confidence interval for mortality recorded in HW compared with that recorded in nHW days pooled and stratified by duration of exposure, age of cows, and month of occurrence. Dairy cows mortality was greater during HW compared with nHW days. Furthermore, compared with nHW days, the risk of mortality continued to be higher during the 3 d after the end of HW. Mortality increased with the length of the HW. Considering deaths stratified by age, cows up to 28 mo were not affected by HW, whereas all the other age categories of older cows (29-60, 61-96, and >96 mo) showed a greater mortality when exposed to HW. The risk of death during HW was higher in early summer months. In particular, the highest risk of mortality was observed during June HW. Present results strongly support the implementation of adaptation strategies which may limit heat stress-related impairment of animal welfare and economic losses in dairy cow farm during HW. |
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2016-06-01 |
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0022-0302 |
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LiveM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
4744 |
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Author |
Bernabucci, U.; Biffani, S.; Buggiotti, L.; Vitali, A.; Lacetera, N.; Nardone, A. |
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Title |
The effects of heat stress in Italian Holstein dairy cattle |
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Journal Article |
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Year |
2014 |
Publication |
Journal of Dairy Science |
Abbreviated Journal |
J. Dairy Sci. |
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Volume |
97 |
Issue |
1 |
Pages |
471-486 |
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Keywords |
Animals; Breeding; Cattle; Dietary Fats/analysis; Dietary Proteins/analysis; Female; Genetic Variation; Heat Stress Disorders/*veterinary; *Hot Temperature; Humans; Humidity; *Lactation; Linear Models; Milk/chemistry; Parity; Phenotype; Weather; dairy cow; heritability; production trait; temperature-humidity index breaking point |
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The data set for this study comprised 1,488,474 test-day records for milk, fat, and protein yields and fat and protein percentages from 191,012 first-, second-, and third-parity Holstein cows from 484 farms. Data were collected from 2001 through 2007 and merged with meteorological data from 35 weather stations. A linear model (M1) was used to estimate the effects of the temperature-humidity index (THI) on production traits. Least squares means from M1 were used to detect the THI thresholds for milk production in all parities by using a 2-phase linear regression procedure (M2). A multiple-trait repeatability test-model (M3) was used to estimate variance components for all traits and a dummy regression variable (t) was defined to estimate the production decline caused by heat stress. Additionally, the estimated variance components and M3 were used to estimate traditional and heat-tolerance breeding values (estimated breeding values, EBV) for milk yield and protein percentages at parity 1. An analysis of data (M2) indicated that the daily THI at which milk production started to decline for the 3 parities and traits ranged from 65 to 76. These THI values can be achieved with different temperature/humidity combinations with a range of temperatures from 21 to 36°C and relative humidity values from 5 to 95%. The highest negative effect of THI was observed 4 d before test day over the 3 parities for all traits. The negative effect of THI on production traits indicates that first-parity cows are less sensitive to heat stress than multiparous cows. Over the parities, the general additive genetic variance decreased for protein content and increased for milk yield and fat and protein yield. Additive genetic variance for heat tolerance showed an increase from the first to third parity for milk, protein, and fat yield, and for protein percentage. Genetic correlations between general and heat stress effects were all unfavorable (from -0.24 to -0.56). Three EBV per trait were calculated for each cow and bull (traditional EBV, traditional EBV estimated with the inclusion of THI covariate effect, and heat tolerance EBV) and the rankings of EBV for 283 bulls born after 1985 with at least 50 daughters were compared. When THI was included in the model, the ranking for 17 and 32 bulls changed for milk yield and protein percentage, respectively. The heat tolerance genetic component is not negligible, suggesting that heat tolerance selection should be included in the selection objectives. |
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1525-3198 (Electronic) 0022-0302 (Linking) |
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LiveM, ft_macsur |
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Call Number |
MA @ admin @ |
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4617 |
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