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Ben Touhami, H., & Bellocchi, G. (2015). Bayesian calibration of the Pasture Simulation model (PaSim) to simulate European grasslands under water stress. Ecological Informatics, 30, 356–364.
Abstract: As modeling becomes a more widespread practice in the agro-environmental sciences, scientists need reliable tools to calibrate models against ever more complex and detailed data. We present a generic Bayesian computation framework for grassland simulation, which enables parameter estimation in the Bayesian formalism by using Monte Carlo approaches. We outline the underlying rationale, discuss the computational issues, and provide results from an application of the Pasture Simulation model (PaSim) to three European grasslands. The framework was suited to investigate the challenging problem of calibrating complex biophysical models to data from altered scenarios generated by precipitation reduction (water stress conditions). It was used to infer the parameters of manipulated grassland systems and to assess the gain in uncertainty reduction by updating parameter distributions using measurements of the output variables.
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Ma, S., Lardy, R., Graux, A. - I., Ben Touhami, H., Klumpp, K., Martin, R., et al. (2015). Regional-scale analysis of carbon and water cycles on managed grassland systems. Env. Model. Softw., 72, 356–371.
Abstract: Predicting regional and global carbon (C) and water dynamics on grasslands has become of major interest, as grasslands are one of the most widespread vegetation types worldwide, providing a number of ecosystem services (such as forage production and C storage). The present study is a contribution to a regional-scale analysis of the C and water cycles on managed grasslands. The mechanistic biogeochemical model PaSim (Pasture Simulation model) was evaluated at 12 grassland sites in Europe. A new parameterization was obtained on a common set of eco-physiological parameters, which represented an improvement of previous parameterization schemes (essentially obtained via calibration at specific sites). We found that C and water fluxes estimated with the parameter set are in good agreement with observations. The model with the new parameters estimated that European grassland are a sink of C with 213 g C m(-2) yr(-1), which is close to the observed net ecosystem exchange (NEE) flux of the studied sites (185 g C m(-2) yr(-1) on average). The estimated yearly average gross primary productivity (GPP) and ecosystem respiration (RECO) for all of the study sites are 1220 and 1006 g C m(-2) yr(-1), respectively, in agreement with observed average GPP (1230 g C m(-2) yr(-1)) and RECO (1046 g C m(-2) yr(-1)). For both variables aggregated on a weekly basis, the root mean square error (RMSE) was similar to 5-16 g C week(-1) across the study sites, while the goodness of fit (R-2) was similar to 0.4-0.9. For evapotranspiration (ET), the average value of simulated ET (415 mmyr(-1)) for all sites and years is close to the average value of the observed ET (451 mm yr(-1)) by flux towers (on a weekly basis, RMSE similar to 2-8 mm week(-1); R-2 = 0.3-0.9). However, further model development is needed to better represent soil water dynamics under dry conditions and soil temperature in winter. A quantification of the uncertainties introduced by spatially generalized parameter values in C and water exchange estimates is also necessary. In addition, some uncertainties in the input management data call for the need to improve the quality of the observational system.
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Rolinski, S., Weindl, I., Heinke, J., Bodirsky, B. L., Biewald, A., & Lotze-Campen, H. (2015). Pasture harvest, carbon sequestration and feeding potentials under different grazing intensities. Advances in Animal Biosciences, 6(01), 43–45.
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Sandor, R., Ehrhardt, F., Grace, P., Recous, S., Smith, P., Snow, V., et al. (2020). Ensemble modelling of carbon fluxes in grasslands and croplands. Field Crops Research, 252, 107791.
Abstract: Croplands and grasslands are agricultural systems that contribute to land–atmosphere exchanges of carbon (C). We evaluated and compared gross primary production (GPP), ecosystem respiration (RECO), net ecosystem exchange (NEE) of CO2, and two derived outputs – C use efficiency (CUE=-NEE/GPP) and C emission intensity (IntC= -NEE/Offtake [grazed or harvested biomass]). The outputs came from 23 models (11 crop-specific, eight grassland-specific, and four models covering both systems) at three cropping sites over several rotations with spring and winter cereals, soybean and rapeseed in Canada, France and India, and two temperate permanent grasslands in France and the United Kingdom. The models were run independently over multi-year simulation periods in five stages (S), either blind with no calibration and initialization data (S1), using historical management and climate for initialization (S2), calibrated against plant data (S3), plant and soil data together (S4), or with the addition of C and N fluxes (S5). Here, we provide a framework to address methodological uncertainties and contextualize results. Most of the models overestimated or underestimated the C fluxes observed during the growing seasons (or the whole years for grasslands), with substantial differences between models. For each simulated variable, changes in the multi-model median (MMM) from S1 to S5 was used as a descriptor of the ensemble performance. Overall, the greatest improvements (MMM approaching the mean of observations) were achieved at S3 or higher calibration stages. For instance, grassland GPP MMM was equal to 1632 g C m−2 yr-1 (S5) while the observed mean was equal to 1763 m-2 yr-1 (average for two sites). Nash-Sutcliffe modelling efficiency coefficients indicated that MMM outperformed individual models in 92.3 % of cases. Our study suggests a cautious use of large-scale, multi-model ensembles to estimate C fluxes in agricultural sites if some site-specific plant and soil observations are available for model calibration. The further development of crop/grassland ensemble modelling will hinge upon the interpretation of results in light of the way models represent the processes underlying C fluxes in complex agricultural systems (grassland and crop rotations including fallow periods).
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Gomara, I., Bellocchi, G., Martin, R., Rodriguez-Fonseca, B., & Ruiz-Ramos, M. (2020). Influence of climate variability on the potential forage production of a mown permanent grassland in the French Massif Central. Agricultural and Forest Meteorology, 280, 107768.
Abstract: Climate Services (CS) provide support to decision makers across socio-economic sectors. In the agricultural sector, one of the most important CS applications is to provide timely and accurate yield forecasts based on climate prediction. In this study, the Pasture Simulation model (PaSim) was used to simulate, for the period 1959–2015, the forage production of a mown grassland system (Laqueuille, Massif Central of France) under different management conditions, with meteorological inputs extracted from the SAFRAN atmospheric database. The aim was to generate purely climate-dependent timeseries of optimal forage production, a variable that was maximized by brighter and warmer weather conditions at the grassland. A long-term increase was observed in simulated forage yield, with the 1995–2015 average being 29% higher than the 1959–1979 average. Such increase seems consistent with observed rising trends in temperature and CO2, and multi-decadal changes in incident solar radiation. At interannual timescales, sea surface temperature anomalies of the Mediterranean (MED), Tropical North Atlantic (TNA), equatorial Pacific (El Niño Southern Oscillation) and the North Atlantic Oscillation (NAO) index were found robustly correlated with annual forage yield values. Relying only on climatic predictors, we developed a stepwise statistical multi-regression model with leave-one-out cross-validation. Under specific management conditions (e.g., three annual cuts) and from one to five months in advance, the generated model successfully provided a p-value<0.01 in correlation (t-test), a root mean square error percentage (%RMSE) of 14.6% and a 71.43% hit rate predicting above/below average years in terms of forage yield collection. This is the first modeling study on the possible role of large-scale oceanic–atmospheric teleconnections in driving forage production in Europe. As such, it provides a useful springboard to implement a grassland seasonal forecasting system in this continent.
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