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Hidy, D., Barcza, Z., Haszpra, L., Churkina, G., Pintér, K., & Nagy, Z. (2012). Development of the Biome-BGC model for simulation of managed herbaceous ecosystems. Ecol. Model., 226, 99–119.
Abstract: Apart from measurements, numerical models are the most convenient instruments to analyze the carbon and water balance of terrestrial ecosystems and their interactions with changing environmental conditions. The process-based Biome-BGC model is widely used to simulate the storage and flux of water, carbon, and nitrogen within the vegetation, litter, and soil of unmanaged terrestrial ecosystems. Considering herbaceous vegetation related simulations with Biome-BGC, soil moisture and growing season control on ecosystem functioning is inaccurate due to the simple soil hydrology and plant phenology representation within the model. Consequently, Biome-BGC has limited applicability in herbaceous ecosystems because (1) they are usually managed; (2) they are sensitive to soil processes, most of all hydrology; and (3) their carbon balance is closely connected with the growing season length. Our aim was to improve the applicability of Biome-BGC for managed herbaceous ecosystems by implementing several new modules, including management. A new index (heatsum growing season index) was defined to accurately estimate the first and the final days of the growing season. Instead of a simple bucket soil sub-model, a multilayer soil sub-model was implemented, which can handle the processes of runoff, diffusion and percolation. A new module was implemented to simulate the ecophysiological effect of drought stress on plant mortality. Mowing and grazing modules were integrated in order to quantify the functioning of managed ecosystems. After modifications, the Biome-BGC model was calibrated and validated using eddy covariance-based measurement data collected in Hungarian managed grassland ecosystems. Model calibration was performed based on the Bayes theorem. As a result of these developments and calibration, the performance of the model was substantially improved. Comparison with measurement-based estimate showed that the start and the end of the growing season are now predicted with an average accuracy of 5 and 4 days instead of 46 and 85 days as in the original model. Regarding the different sites and modeled fluxes (gross primary production, total ecosystem respiration, evapotranspiration), relative errors were between 18-60% using the original model and 10-18% using the developed model; squares of the correlation coefficients were between 0.02-0.49 using the original model and 0.50-0.81 using the developed model. (c) 2011 Elsevier B.V. All rights reserved.
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Perego, A., Giussani, A., Sanna, M., Fumagalli, M., Carozzi, M., Alfieri, L., et al. (2013). The ARMOSA simulation crop model: overall features, calibration and validation results. Italian Journal of Agrometeorology, 3, 23–38.
Abstract: ARMOSA is a dynamic simulation model which was developed to simulate crop growth and development, water and nitrogen dynamics under different pedoclimatic conditions and cropping systems in the arable land. The model is meant to be a tool for the evaluation of the impact of different crop management practices on soil nitrogen and carbon cycles and groundwater nitrate pollution. A large data set collected over three to six years from six monitoring sites in Lombardia plain was used to calibrate and validate the model parameters. Measured meteorological data, soil chemical and physical characterizations, crop-related data of different cropping systems allowed for a proper parameterization. Fit indexes showed the reliability of the model in adequately predicting crop-related variables, such as above ground biomass (RRMSE=11.18, EF=0.94, r=0.97), Leaf Area Index maximum value (RRMSE=8.24, EF=0.37, r=0.72), harvest index (RRMSE=19.4, EF=0.32, r=0.74), and crop N uptake (RRMSE=20.25, EF=0.69, r=0.85). Using two different one-year data set from each monitoring site, the model was calibrated and validated, getting to encouraging results: RRMSE=6.28, EF=0.52, r=0.68 for soil water content at different depths, and RRMSE=34.89, EF=0.59, r=0.75 for soil NO3-N content along soil profile. The simulated N leaching was in full agreement with measured data (RRMSE=26.62, EF=0.88, r=0.98).
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Humblot, P., Jayet, P. A., Clerino, P., Leconte-Demarsy, D., Szopa, S., & Castell, J. F. (2013). Assessment of ozone impacts on farming systems: a bio-economic modeling approach applied to the widely diverse French case. Ecol. Econ., 85, 50–58.
Abstract: As a result of anthropogenic activities, ozone is produced in the surface atmosphere, causing direct damage to plants and reducing crop yields. By combining a biophysical crop model with an economic supply model we were able to predict and quantify this effect at a fine spatial resolution. We applied our approach to the very varied French case and showed that ozone has significant productivity and land-use effects. A comparison of moderate and high ozone scenarios for 2030 shows that wheat production may decrease by more than 30% and barley production may increase by more than 14% as surface ozone concentration increases. These variations are due to the direct effect of ozone on yields as well as to modifications in land use caused by a shift toward more ozone-resistant crops: our study predicts a 16% increase in the barley-growing area and an equal decrease in the wheat-growing area. Moreover, mean agricultural gross margin losses can go as high as 2.5% depending on the ozone scenario, and can reach 7% in some particularly affected regions. A rise in ozone concentration was also associated with a reduction of agricultural greenhouse gas emissions of about 2%, as a result of decreased use of nitrogen fertilizers. One noteworthy result was that major impacts, including changes in land use, do not necessarily occur in ozone high concentration zones, and may strongly depend on farm systems and their adaptation capability. Our study suggests that policy makers should view ozone pollution as a major potential threat to agricultural yields. (C) 2012 Elsevier B.V. All rights reserved.
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Ben Touhami, H., & Bellocchi, G. (2015). Bayesian calibration of the Pasture Simulation model (PaSim) to simulate European grasslands under water stress. Ecological Informatics, 30, 356–364.
Abstract: As modeling becomes a more widespread practice in the agro-environmental sciences, scientists need reliable tools to calibrate models against ever more complex and detailed data. We present a generic Bayesian computation framework for grassland simulation, which enables parameter estimation in the Bayesian formalism by using Monte Carlo approaches. We outline the underlying rationale, discuss the computational issues, and provide results from an application of the Pasture Simulation model (PaSim) to three European grasslands. The framework was suited to investigate the challenging problem of calibrating complex biophysical models to data from altered scenarios generated by precipitation reduction (water stress conditions). It was used to infer the parameters of manipulated grassland systems and to assess the gain in uncertainty reduction by updating parameter distributions using measurements of the output variables.
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Sieber, S., Amjath-Babu, T. S., Jansson, T., Müller, K., Tscherning, K., Graef, F., et al. (2013). Sustainability impact assessment using integrated meta-modelling: Simulating the reduction of direct support under the EU common agricultural policy (CAP). Land Use Policy, 33, 235–245.
Abstract: Assessing the impact of macro-level policy driven land use changes on regional sustainability is an important task that can facilitate complex decision making processes of introducing reforms. The research work demonstrates the ability of Sustainability Impact Assessment Tool (SIAT), a meta-model, in conducting ex ante spatially explicit cross sectoral impact assessments of changes in common agricultural policy (CAP). The meta-model is able to appraise impacts of CAP amendments on land use and their repercussions on multiple indicators of sustainability. The presented study comprehensively analyses the possible impacts of discontinuing direct financial support to farmers under CAP. The simulations of the meta-model are able to reveal the land use changes both at EU and regional levels as well as to bring forth the subsequent changes in a number of indicators representing the regional sustainability (for five case study regions). In a nutshell, the simulations indicate that a reduction in direct support brings in general, a decrease in farmed area, an increase in forested land, less fluctuation in natural vegetation coverage, increase in abandoned arable land area and negligible changes in built-up area despite regionally diverging land use trends. The simulated changes in sustainability indicators for the study regions in consequence to these land use changes show that the discontinuation of subsidies evokes responses that are in general climate friendly (reduction in methane and N2O emissions, diminishing energy use and reduction in global warming potential), economically beneficial (increase in gross value of agriculture) and socially desired (decrease in unemployment rate) as well as environmentally harmful (increase in pesticide use). Even though the appraisals of diversity indicators such as forest deadwood and farmland birds are not conclusive for all regions, the changes are positive for the former indicator and slightly negative for the latter in general. The trade-offs among these regional sustainability indicators using their directional associations are also presented for a comprehensive assessment of the impacts. (C) 2013 Elsevier Ltd. All rights reserved.
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