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Ben Touhami, H., & Bellocchi, G. (2015). Bayesian calibration of the Pasture Simulation model (PaSim) to simulate European grasslands under water stress. Ecological Informatics, 30, 356–364.
Abstract: As modeling becomes a more widespread practice in the agro-environmental sciences, scientists need reliable tools to calibrate models against ever more complex and detailed data. We present a generic Bayesian computation framework for grassland simulation, which enables parameter estimation in the Bayesian formalism by using Monte Carlo approaches. We outline the underlying rationale, discuss the computational issues, and provide results from an application of the Pasture Simulation model (PaSim) to three European grasslands. The framework was suited to investigate the challenging problem of calibrating complex biophysical models to data from altered scenarios generated by precipitation reduction (water stress conditions). It was used to infer the parameters of manipulated grassland systems and to assess the gain in uncertainty reduction by updating parameter distributions using measurements of the output variables.
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Bellocchi, G., Rivington, M., Matthews, K., & Acutis, M. (2015). Deliberative processes for comprehensive evaluation of agroecological models. A review. Agron. Sust. Developm., 35(2), 589–605.
Abstract: The use of biophysical models in agroecology has increased in the last few decades for two main reasons: the need to formalize empirical knowledge and the need to disseminate model-based decision support for decision makers (such as farmers, advisors, and policy makers). The first has encouraged the development and use of mathematical models to enhance the efficiency of field research through extrapolation beyond the limits of site, season, and management. The second reflects the increasing need (by scientists, managers, and the public) for simulation experimentation to explore options and consequences, for example, future resource use efficiency (i.e., management in sustainable intensification), impacts of and adaptation to climate change, understanding market and policy responses to shocks initiated at a biophysical level under increasing demand, and limited supply capacity. Production concerns thus dominate most model applications, but there is a notable growing emphasis on environmental, economic, and policy dimensions. Identifying effective methods of assessing model quality and performance has become a challenging but vital imperative, considering the variety of factors influencing model outputs. Understanding the requirements of stakeholders, in respect of model use, logically implies the need for their inclusion in model evaluation methods. We reviewed the use of metrics of model evaluation, with a particular emphasis on the involvement of stakeholders to expand horizons beyond conventional structured, numeric analyses. Two major topics are discussed: (1) the importance of deliberative processes for model evaluation, and (2) the role computer-aided techniques may play to integrate deliberative processes into the evaluation of agroecological models. We point out that (i) the evaluation of agroecological models can be improved through stakeholder follow-up, which is a key for the acceptability of model realizations in practice, (ii) model credibility depends not only on the outcomes of well-structured, numerically based evaluation, but also on less tangible factors that may need to be addressed using complementary deliberative processes, (iii) comprehensive evaluation of simulation models can be achieved by integrating the expectations of stakeholders via a weighting system of preferences and perception, (iv) questionnaire-based surveys can help understand the challenges posed by the deliberative process, and (v) a benefit can be obtained if model evaluation is conceived in a decisional perspective and evaluation techniques are developed at the same pace with which the models themselves are created and improved. Scientific knowledge hubs are also recognized as critical pillars to advance good modeling practice in relation to model evaluation (including access to dedicated software tools), an activity which is frequently neglected in the context of time-limited framework programs.
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Bassu, S., Brisson, N., Durand, J. - L., Boote, K., Lizaso, J., Jones, J. W., et al. (2014). How do various maize crop models vary in their responses to climate change factors. Glob. Chang. Biol., 20(7), 2301–2320.
Abstract: Potential consequences of climate change on crop production can be studied using mechanistic crop simulation models. While a broad variety of maize simulation models exist, it is not known whether different models diverge on grain yield responses to changes in climatic factors, or whether they agree in their general trends related to phenology, growth, and yield. With the goal of analyzing the sensitivity of simulated yields to changes in temperature and atmospheric carbon dioxide concentrations [CO2 ], we present the largest maize crop model intercomparison to date, including 23 different models. These models were evaluated for four locations representing a wide range of maize production conditions in the world: Lusignan (France), Ames (USA), Rio Verde (Brazil) and Morogoro (Tanzania). While individual models differed considerably in absolute yield simulation at the four sites, an ensemble of a minimum number of models was able to simulate absolute yields accurately at the four sites even with low data for calibration, thus suggesting that using an ensemble of models has merit. Temperature increase had strong negative influence on modeled yield response of roughly -0.5 Mg ha(-1) per °C. Doubling [CO2 ] from 360 to 720 μmol mol(-1) increased grain yield by 7.5% on average across models and the sites. That would therefore make temperature the main factor altering maize yields at the end of this century. Furthermore, there was a large uncertainty in the yield response to [CO2 ] among models. Model responses to temperature and [CO2 ] did not differ whether models were simulated with low calibration information or, simulated with high level of calibration information.
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Bai, H., Tao, F., Xiao, D., Liu, F., & Zhang, H. (2016). Attribution of yield change for rice-wheat rotation system in China to climate change, cultivars and agronomic management in the past three decades. Clim. Change, 135(3-4), 539–553.
Abstract: Using the detailed field experiment data from 1981 to 2009 at four representative agro-meteorological experiment stations in China, along with the Agricultural Production System Simulator (APSIM) rice-wheat model, we evaluated the impact of sowing/transplanting date on phenology and yield of rice-wheat rotation system (RWRS). We also disentangled the contributions of climate change, modern cultivars, sowing/transplanting density and fertilization management, as well as changes in each climate variables, to yield change in RWRS, in the past three decades. We found that change in sowing/transplanting date did not significantly affect rice and wheat yield in RWRS, although alleviated the negative impact of climate change to some extent. From 1981 to 2009, climate change jointly caused rice and wheat yield change by -17.4 to 1.5 %, of which increase in temperature reduced yield by 0.0-5.8 % and decrease in solar radiation reduced it by 1.5-8.7 %. Cultivars renewal, modern sowing/transplanting density and fertilization management contributed to yield change by 14.4-27.2, -4.7- -0.1 and 2.3-22.2 %, respectively. Our findings highlight that modern cultivars and agronomic management compensated the negative impacts of climate change and played key roles in yield increase in the past three decades.
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Asseng, S., Ewert, F., Rosenzweig, C., Jones, J. W., Hatfield, J. L., Ruane, A. C., et al. (2013). Uncertainty in simulating wheat yields under climate change. Nat. Clim. Change, 3(9), 827–832.
Abstract: Projections of climate change impacts on crop yields are inherently uncertain(1). Uncertainty is often quantified when projecting future greenhouse gas emissions and their influence on climate(2). However, multi-model uncertainty analysis of crop responses to climate change is rare because systematic and objective comparisons among process-based crop simulation models(1,3) are difficult(4). Here we present the largest standardized model intercomparison for climate change impacts so far. We found that individual crop models are able to simulate measured wheat grain yields accurately under a range of environments, particularly if the input information is sufficient. However, simulated climate change impacts vary across models owing to differences in model structures and parameter values. A greater proportion of the uncertainty in climate change impact projections was due to variations among crop models than to variations among downscaled general circulation models. Uncertainties in simulated impacts increased with CO2 concentrations and associated warming. These impact uncertainties can be reduced by improving temperature and CO2 relationships in models and better quantified through use of multi-model ensembles. Less uncertainty in describing how climate change may affect agricultural productivity will aid adaptation strategy development and policymaking.
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