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Vitali, A., Lana, E., Amadori, M., Bernabucci, U., Nardone, A., & Lacetera, N. (2014). Analysis of factors associated with mortality of heavy slaughter pigs during transport and lairage. J. Anim. Sci., 92(11), 5134–5141.
Abstract: The study was based on data collected during 5 yr (2003-2007) and was aimed at assessing the effects of the month, slaughter house of destination (differing for stocking density, openings, brightness, and cooling device types), length of the journey, and temperature-humidity index (THI) on mortality of heavy slaughter pigs (approximately 160 kg live weight) during transport and lairage. Data were obtained from 24,098 journeys and 3,676,153 pigs transported from 1,618 farms to 3 slaughter houses. Individual shipments were the unit of observation. The terms dead on arrival (DOA) and dead in pen (DIP) refer to pigs that died during transport and in lairage at the abattoir before slaughtering, respectively. These 2 variables were assessed as the dependent counts in separate univariate Poisson regressions. The independent variables assessed univariately in each set of regressions were month of shipment, slaughter house of destination, time traveled, and each combination of the month with the time traveled. Two separate piecewise regressions were done. One used DOA counts within THI levels over pigs transported as a dependent ratio and the second used DIP counts within THI levels over pigs from a transport kept in lairage as a dependent ratio. The THI was the sole independent variable in each case. The month with the greatest frequency of deaths was July with a risk ratio of 1.22 (confidence interval: 1.06-1.36; P < 0.05) and 1.27 (confidence interval: 1.06-1.51; P < 0.05) for DOA and DIP, respectively. The lower mortality risk ratios for DOA and DIP were recorded for January and March (P < 0.05). The aggregated data of the summer (June, July, and August) versus non-summer (January, March, September, and November) months showed a greater risk of pigs dying during the hot season when considering both transport and lairage (P < 0.05). The mortality risk ratio of DIP was lower at the slaughter house with the lowest stocking density (0.64 m(2)/100 kg live weight), large open windows on the roof and sidewalls, low brightness (40 lx) lights, and high-pressure sprinklers as cooling devices. The mortality risk ratio of DOA increased significantly for journeys longer than 2 h, whereas no relationship was found between length of transport and DIP. The piecewise analysis pointed out that 78.5 and 73.6 THI were the thresholds above which the mortality rate increased significantly for DOA and DIP, respectively. These results may help the pig industry to improve the welfare of heavy slaughter pigs during transport and lairage.
Keywords: Abattoirs/*statistics & numerical data; Animals; *Data Interpretation, Statistical; Humidity/adverse effects; Light/adverse effects; *Mortality; Retrospective Studies; Seasons; Swine/*physiology; Temperature; Time Factors; Transportation/*statistics & numerical data; lairage; mortality; pigs; temperature-humidity index; transport
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Zhao, G., Hoffmann, H., van Bussel, L. G. J., Enders, A., Specka, X., Sosa, C., et al. (2015). Effect of weather data aggregation on regional crop simulation for different crops, production conditions, and response variables. Clim. Res., 65, 141–157.
Abstract: We assessed the weather data aggregation effect (DAE) on the simulation of cropping systems for different crops, response variables, and production conditions. Using 13 process-based crop models and the ensemble mean, we simulated 30 yr continuous cropping systems for 2 crops (winter wheat and silage maize) under 3 production conditions for the state of North Rhine-Westphalia, Germany. The DAE was evaluated for 5 weather data resolutions (i.e. 1, 10, 25, 50, and 100 km) for 3 response variables including yield, growing season evapotranspiration, and water use efficiency. Five metrics, viz. the spatial bias (Delta), average absolute deviation (AAD), relative AAD, root mean squared error (RMSE), and relative RMSE, were used to evaluate the DAE on both the input weather data and simulated results. For weather data, we found that data aggregation narrowed the spatial variability but widened the., especially across mountainous areas. The DAE on loss of spatial heterogeneity and hotspots was stronger than on the average changes over the region. The DAE increased when coarsening the spatial resolution of the input weather data. The DAE varied considerably across different models, but changed only slightly for different production conditions and crops. We conclude that if spatially detailed information is essential for local management decision, higher resolution is desirable to adequately capture the spatial variability for heterogeneous regions. The required resolution depends on the choice of the model as well as the environmental condition of the study area.
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Zhao, G., Hoffmann, H., Yeluripati, J., Xenia, S., Nendel, C., Coucheney, E., et al. (2016). Evaluating the precision of eight spatial sampling schemes in estimating regional means of simulated yield for two crops. Env. Model. Softw., 80, 100–112.
Abstract: We compared the precision of simple random sampling (SimRS) and seven types of stratified random sampling (StrRS) schemes in estimating regional mean of water-limited yields for two crops (winter wheat and silage maize) that were simulated by fourteen crop models. We found that the precision gains of StrRS varied considerably across stratification methods and crop models. Precision gains for compact geographical stratification were positive, stable and consistent across crop models. Stratification with soil water holding capacity had very high precision gains for twelve models, but resulted in negative gains for two models. Increasing the sample size monotonously decreased the sampling errors for all the sampling schemes. We conclude that compact geographical stratification can modestly but consistently improve the precision in estimating regional mean yields. Using the most influential environmental variable for stratification can notably improve the sampling precision, especially when the sensitivity behavior of a crop model is known.
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Zhao, G., Siebert, S., Enders, A., Rezaei, E. E., Yan, C., & Ewert, F. (2015). Demand for multi-scale weather data for regional crop modeling. Agricultural and Forest Meteorology, 200, 156–171.
Abstract: A spatial resolution needs to be determined prior to using models to simulate crop yields at a regional scale, but a dilemma exists in compromising between different demands. A fine spatial resolution demands extensive computation load for input data assembly, model runs, and output analysis. A coarse spatial resolution could result in loss of spatial detail in variability. This paper studied the impact of spatial resolution, data aggregation and spatial heterogeneity of weather data on simulations of crop yields, thus providing guidelines for choosing a proper spatial resolution for simulations of crop yields at regional scale. Using a process-based crop model SIMPLACE (LINTUL2) and daily weather data at 1 km resolution we simulated a continuous rainfed winter wheat cropping system at the national scale of Germany. Then we aggregated the weather data to four resolutions from 10 to 100 km, repeated the simulation, compared them with the 1 km results, and correlated the difference with the intra-pixel heterogeneity quantified by an ensemble of four semivariogram models. Aggregation of weather data had small effects over regions with a flat terrain located in northern Germany, but large effects over southern regions with a complex topography. The spatial distribution of yield bias at different spatial resolutions was consistent with the intra-pixel spatial heterogeneity of the terrain and a log-log linear relationship between them was established. By using this relationship we demonstrated the way to optimize the model resolution to minimize both the number of simulation runs and the expected loss of spatial detail in variability due to aggregation effects. We concluded that a high spatial resolution is desired for regions with high spatial environmental heterogeneity, and vice versa. This calls for the development of multi-scale approaches in regional and global crop modeling. The obtained results require substantiation for other production situations, crops, output variables and for different crop models. (C) 2014 Elsevier B.V. All rights reserved.
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