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Tao, F., Roetter, R. P., Palosuo, T., Diaz-Ambrona, C. G. H., Ines Minguez, M., Semenov, M. A., et al. (2017). Designing future barley ideotypes using a crop model ensemble. Europ. J. Agron., 82, 144–162.
Abstract: Climate change and its associated higher frequency and severity of adverse weather events require genotypic adaptation. Process-based ecophysiological modelling offers a powerful means to better target and accelerate development of new crop cultivars. Barley (Hordeum vulgare L) is an important crop throughout the world, and a good model for study of the genetics of stress adaptation because many quantitative trait loci and candidate genes for biotic and abiotic stress tolerance have been identified in it. Here, we developed a new approach to design future crop ideotypes using an ensemble of eight barley simulation models (i.e. APSIM, CropSyst, HERMES, MCWLA, MONICA, SIMPLACE, Sirius Quality, and WOFOST), and applied it to design climate-resilient barley ideotypes for Boreal and Mediterranean climatic zones in Europe. The results showed that specific barley genotypes, represented by sets of cultivar parameters in the crop models, could be promising under future climate change conditions, resulting in increased yields and low inter-annual yield variability. In contrast, other genotypes could result in substantial yield declines. The most favorable climate-zone-specific barley ideotypes were further proposed, having combinations of several key genetic traits in terms of phenology, leaf growth, photosynthesis, drought tolerance, and grain formation. For both Boreal and Mediterranean climatic zones, barley ideotypes under future climatic conditions should have a longer reproductive growing period, lower leaf senescence rate, larger radiation use efficiency or maximum assimilation rate, and higher drought tolerance. Such characteristics can produce substantial positive impacts on yields under contrasting conditions. Moreover, barley ideotypes should have a low photoperiod and high vernalization sensitivity for the Boreal climatic zone; for the Mediterranean, in contrast, it should have a low photoperiod and low vernalization sensitivity. The drought-tolerance trait is more beneficial for the Mediterranean than for the Boreal climatic zone. Our study demonstrates a sound approach to design future barley ideotypes based on an ensemble of well-tested, diverse crop models and on integration of knowledge from multiple disciplines. The robustness of model-aided ideotypes design can be further enhanced by continuously improving crop models and enhancing information exchange between modellers, agro-meteorologists, geneticists, physiologists, and plant breeders. (C) 2016 Elsevier B.V. All rights reserved.
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Hakala, K., Jauhiainen, L., Himanen, S. J., RÖTter, R., Salo, T., & Kahiluoto, H. (2012). Sensitivity of barley varieties to weather in Finland. J. Agric. Sci., 150(02), 145–160.
Abstract: Global climate change is predicted to shift seasonal temperature and precipitation patterns. An increasing frequency of extreme weather events such as heat waves and prolonged droughts is predicted, but there are high levels of uncertainty about the nature of local changes. Crop adaptation will be important in reducing potential damage to agriculture. Crop diversity may enhance resilience to climate variability and changes that are difficult to predict. Therefore, there has to be sufficient diversity within the set of available cultivars in response to weather parameters critical for yield formation. To determine the scale of such ‘weather response diversity’ within barley (Hordeum vulgare L.), an important crop in northern conditions, the yield responses of a wide range of modern and historical varieties were analysed according to a well-defined set of critical agro-meteorological variables. The Finnish long-term dataset of MTT Official Variety Trials was used together with historical weather records of the Finnish Meteorological Institute. The foci of the analysis were firstly to describe the general response of barley to different weather conditions and secondly to reveal the diversity among varieties in the sensitivity to each weather variable. It was established that barley yields were frequently reduced by drought or excessive rain early in the season, by high temperatures at around heading, and by accelerated temperature sum accumulation rates during periods 2 weeks before heading and between heading and yellow ripeness. Low temperatures early in the season increased yields, but frost during the first 4 weeks after sowing had no effect. After canopy establishment, higher precipitation on average resulted in higher yields. In a cultivar-specific analysis, it was found that there were differences in responses to all but three of the studied climatic variables: waterlogging and drought early in the season and temperature sum accumulation rate before heading. The results suggest that low temperatures early in the season, delayed sowing, rain 3-7 weeks after sowing, a temperature change 3-4 weeks after sowing, a high temperature sum accumulation rate from heading to yellow ripeness and high temperatures (25 degrees C) at around heading could mostly be addressed by exploiting the traits found in the range of varieties included in the present study. However, new technology and novel genetic material are needed to enable crops to withstand periods of excessive rain or drought early in the season and to enhance performance under increased temperature sum accumulation rates prior to heading.
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Himanen, S. J., Ketoja, E., Hakala, K., Rötter, R. P., Salo, T., & Kahiluoto, H. (2013). Cultivar diversity has great potential to increase yield for feed barley. Agron. Sust. Developm., 33(3), 519–530.
Abstract: This study shows an average yield increase of 415–1,338 kg ha−1 per unit increase of the Shannon diversity index for feed barley cultivar use. There is a global quest to increase food production sustainably. Therefore, judicious farmer choices such as selection of crop cultivars are increasingly important. Cultivar diversity is limited and, as a consequence, corresponding crop yields are highly impacted by local weather variations and global climate change. Actually, there is little knowledge on the relationships between yields of regional crops and cultivar diversity, that is evenness and richness in cultivar use. Here, we hypothesized that higher cultivar diversity is related to higher regional yield. We also assumed that the diversity-yield relationship depends on weather during the growing season. Our data were based on farm yield surveys of feed and malting barley, Hordeum vulgare L.; spring wheat, Triticum aestivum L.; and spring turnip rape, Brassica rapa L. ssp. oleifera, from 1998 to 2009, representing about 4,500–5,500 farms annually. We modeled the relationships between regional yields and Shannon diversity indices in high-yielding (south-west) and low-yielding (central-east) regions of Finland using linear mixed models. Our results show that an increase of Shannon diversity index increases yield of feed barley. Feed barley had also the greatest cultivar diversity. In contrast, an average yield decrease of 1,052 kg ha−1 per unit increase in Shannon index was found for spring rape in 2006 and 2008. Our findings show that cultivar diversification has potential to raise mean regional yield of feed barley. Increasing cultivar diversity thus offers a novel, sustainability-favoring means to promote higher yields.
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Tao, F., Roetter, R. P., Palosuo, T., Hernandez Diaz-Ambrona, C. G., Ines Minguez, M., Semenov, M. A., et al. (2018). Contribution of crop model structure, parameters and climate projections to uncertainty in climate change impact assessments. Glob. Chang. Biol., 24(3), 1291–1307.
Abstract: Climate change impact assessments are plagued with uncertainties from many sources, such as climate projections or the inadequacies in structure and parameters of the impact model. Previous studies tried to account for the uncertainty from one or two of these. Here, we developed a triple-ensemble probabilistic assessment using seven crop models, multiple sets of model parameters and eight contrasting climate projections together to comprehensively account for uncertainties from these three important sources. We demonstrated the approach in assessing climate change impact on barley growth and yield at Jokioinen, Finland in the Boreal climatic zone and Lleida, Spain in the Mediterranean climatic zone, for the 2050s. We further quantified and compared the contribution of crop model structure, crop model parameters and climate projections to the total variance of ensemble output using Analysis of Variance (ANOVA). Based on the triple-ensemble probabilistic assessment, the median of simulated yield change was -4% and +16%, and the probability of decreasing yield was 63% and 31% in the 2050s, at Jokioinen and Lleida, respectively, relative to 1981-2010. The contribution of crop model structure to the total variance of ensemble output was larger than that from downscaled climate projections and model parameters. The relative contribution of crop model parameters and downscaled climate projections to the total variance of ensemble output varied greatly among the seven crop models and between the two sites. The contribution of downscaled climate projections was on average larger than that of crop model parameters. This information on the uncertainty from different sources can be quite useful for model users to decide where to put the most effort when preparing or choosing models or parameters for impact analyses. We concluded that the triple-ensemble probabilistic approach that accounts for the uncertainties from multiple important sources provide more comprehensive information for quantifying uncertainties in climate change impact assessments as compared to the conventional approaches that are deterministic or only account for the uncertainties from one or two of the uncertainty sources.
Keywords: barley; climate change; Europe; impact; super-ensemble; uncertainty; Nitrogen Dynamics; Multimodel Ensembles; Simulation-Models; Change; Scenarios; Yield; Rice; Weather; Growth; Wheat; Maize
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Salo, T. J., Palosuo, T., Kersebaum, K. C., Nendel, C., Angulo, C., Ewert, F., et al. (2016). Comparing the performance of 11 crop simulation models in predicting yield response to nitrogen fertilization. J. Agric. Sci., 154(7), 1218–1240.
Abstract: Eleven widely used crop simulation models (APSIM, CERES, CROPSYST, COUP, DAISY, EPIC, FASSET, HERMES, MONICA, STICS and WOFOST) were tested using spring barley (Hordeum vulgare L.) data set under varying nitrogen (N) fertilizer rates from three experimental years in the boreal climate of Jokioinen, Finland. This is the largest standardized crop model inter-comparison under different levels of N supply to date. The models were calibrated using data from 2002 and 2008, of which 2008 included six N rates ranging from 0 to 150 kg N/ha. Calibration data consisted of weather, soil, phenology, leaf area index (LAI) and yield observations. The models were then tested against new data for 2009 and their performance was assessed and compared with both the two calibration years and the test year. For the calibration period, root mean square error between measurements and simulated grain dry matter yields ranged from 170 to 870 kg/ha. During the test year 2009, most models failed to accurately reproduce the observed low yield without N fertilizer as well as the steep yield response to N applications. The multi-model predictions were closer to observations than most single-model predictions, but multi-model mean could not correct systematic errors in model simulations. Variation in soil N mineralization and LAI development due to differences in weather not captured by the models most likely was the main reason for their unsatisfactory performance. This suggests the need for model improvement in soil N mineralization as a function of soil temperature and moisture. Furthermore, specific weather event impacts such as low temperatures after emergence in 2009, tending to enhance tillering, and a high precipitation event just before harvest in 2008, causing possible yield penalties, were not captured by any of the models compared in the current study.
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