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Fleisher, D. H., Condori, B., Quiroz, R., Alva, A., Asseng, S., Barreda, C., et al. (2017). A potato model intercomparison across varying climates and productivity levels. Glob. Chang. Biol., 23(3), 1258–1281.
Abstract: A potato crop multimodel assessment was conducted to quantify variation among models and evaluate responses to climate change. Nine modeling groups simulated agronomic and climatic responses at low-input (Chinoli, Bolivia and Gisozi, Burundi)- and high-input (Jyndevad, Denmark and Washington, United States) management sites. Two calibration stages were explored, partial (P1), where experimental dry matter data were not provided, and full (P2). The median model ensemble response outperformed any single model in terms of replicating observed yield across all locations. Uncertainty in simulated yield decreased from 38% to 20% between P1 and P2. Model uncertainty increased with interannual variability, and predictions for all agronomic variables were significantly different from one model to another (P < 0.001). Uncertainty averaged 15% higher for low- vs. high-input sites, with larger differences observed for evapotranspiration (ET), nitrogen uptake, and water use efficiency as compared to dry matter. A minimum of five partial, or three full, calibrated models was required for an ensemble approach to keep variability below that of common field variation. Model variation was not influenced by change in carbon dioxide (C), but increased as much as 41% and 23% for yield and ET, respectively, as temperature (T) or rainfall (W) moved away from historical levels. Increases in T accounted for the highest amount of uncertainty, suggesting that methods and parameters for T sensitivity represent a considerable unknown among models. Using median model ensemble values, yield increased on average 6% per 100-ppm C, declined 4.6% per °C, and declined 2% for every 10% decrease in rainfall (for nonirrigated sites). Differences in predictions due to model representation of light utilization were significant (P < 0.01). These are the first reported results quantifying uncertainty for tuber/root crops and suggest modeling assessments of climate change impact on potato may be improved using an ensemble approach.
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Fronzek, S., Pirttioja, N., Carter, T. R., Bindi, M., Hoffmann, H., Palosuo, T., et al. (2017). Classifying multi-model wheat yield impact response surfaces showing sensitivity to temperature and precipitation change (Vol. 10).
Abstract: Crop growth simulation models can differ greatly in their treatment of key processes and hence in their response to environmental conditions. Here, we used an ensemble of 26 process-based wheat models applied at sites across a European transect to compare their sensitivity to changes in temperature (−2 to +9°C) and precipitation (−50 to +50%). Model results were analysed by plotting them as impact response surfaces (IRSs), classifying the IRS patterns of individual model simulations, describing these classes and analysing factors that may explain the major differences in model responses. The model ensemble was used to simulate yields of winter and spring wheat at sites in Finland, Germany and Spain. Results were plotted as IRSs that show changes in yields relative to the baseline with respect to temperature and precipitation. IRSs of 30-year means and selected extreme years were classified using two approaches describing their pattern. The expert diagnostic approach (EDA) combines two aspects of IRS patterns: location of the maximum yield (nine classes, Figure 1) and strength of the yield response with respect to climate (four classes), resulting in a total of 36 combined classes defined using criteria pre-specified by experts. The statistical diagnostic approach (SDA) groups IRSs by comparing their pattern and magnitude, without attempting to interpret these features. It applies a hierarchical clustering method, grouping response patterns using a distance metric that combines the spatial correlation and Euclidian distance between IRS pairs. The two approaches were used to investigate whether different patterns of yield response could be related to different properties of the crop models, specifically their genealogy, calibration and process description. Although no single model property across a large model ensemble was found to explain the integrated yield response to temperature and precipitation perturbations, the application of the EDA and SDA approaches revealed their capability to distinguish: (i) stronger yield responses to precipitation for winter wheat than spring wheat; (ii) differing strengths of response to climate changes for years with anomalous weather conditions compared to period-average conditions; (iii) the influence of site conditions on yield patterns; (iv) similarities in IRS patterns among models with related genealogy; (v) similarities in IRS patterns for models with simpler process descriptions of root growth and water uptake compared to those with more complex descriptions; and (vi) a closer correspondence of IRS patterns in models using partitioning schemes to represent yield formation than in those using a harvest index. Such results can inform future crop modelling studies that seek to exploit the diversity of multi-model ensembles, by distinguishing ensemble members that span a wide range of responses as well as those that display implausible behaviour or strong mutual similarities. The full manuscript of this study is currently under revision (Fronzek et al. 2017).
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Fronzek, S., Pirttioja, N., Carter, T. R., Bindi, M., Hoffmann, H., Palosuo, T., et al. (2018). Classifying multi-model wheat yield impact response surfaces showing sensitivity to temperature and precipitation change. Agric. Syst., 159, 209–224.
Abstract: Crop growth simulation models can differ greatly in their treatment of key processes and hence in their response to environmental conditions. Here, we used an ensemble of 26 process-based wheat models applied at sites across a European transect to compare their sensitivity to changes in temperature (-2 to +9 degrees C) and precipitation (-50 to +50%). Model results were analysed by plotting them as impact response surfaces (IRSs), classifying the IRS patterns of individual model simulations, describing these classes and analysing factors that may explain the major differences in model responses. The model ensemble was used to simulate yields of winter and spring wheat at four sites in Finland, Germany and Spain. Results were plotted as IRSs that show changes in yields relative to the baseline with respect to temperature and precipitation. IRSs of 30-year means and selected extreme years were classified using two approaches describing their pattern. The expert diagnostic approach (EDA) combines two aspects of IRS patterns: location of the maximum yield (nine classes) and strength of the yield response with respect to climate (four classes), resulting in a total of 36 combined classes defined using criteria pre-specified by experts. The statistical diagnostic approach (SDA) groups IRSs by comparing their pattern and magnitude, without attempting to interpret these features. It applies a hierarchical clustering method, grouping response patterns using a distance metric that combines the spatial correlation and Euclidian distance between IRS pairs. The two approaches were used to investigate whether different patterns of yield response could be related to different properties of the crop models, specifically their genealogy, calibration and process description. Although no single model property across a large model ensemble was found to explain the integrated yield response to temperature and precipitation perturbations, the application of the EDA and SDA approaches revealed their capability to distinguish: (i) stronger yield responses to precipitation for winter wheat than spring wheat; (ii) differing strengths of response to climate changes for years with anomalous weather conditions compared to period-average conditions; (iii) the influence of site conditions on yield patterns; (iv) similarities in IRS patterns among models with related genealogy; (v) similarities in IRS patterns for models with simpler process descriptions of root growth and water uptake compared to those with more complex descriptions; and (vi) a closer correspondence of IRS patterns in models using partitioning schemes to represent yield formation than in those using a harvest index. Such results can inform future crop modelling studies that seek to exploit the diversity of multi-model ensembles, by distinguishing ensemble members that span a wide range of responses as well as those that display implausible behaviour or strong mutual similarities.
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Fronzek, S., Pirttioja, N., Carter, T. R., Bindi, M., Hoffmann, H., Palosuo, T., et al. (2016). Classifying simulated wheat yield responses to changes in temperature and precipitation across a European transect.. Berlin (Germany).
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Ginaldi, F., Bindi, M., Marta, A. D., Ferrise, R., Orlandini, S., & Danuso, F. (2016). Interoperability of agronomic long term experiment databases and crop model intercomparison: the Italian experience. Europ. J. Agron., 77, 209–222.
Abstract: • ICFAR-DB organises and stores data from 16 Italian long term agronomic experiments. • ICFAR-DB fulfils interoperability using system dynamics ontology and AgMIP nomenclature. • ICFAR information management system moves closer data to model and vice versa. The IC-FAR national project (Linking long term observatories with crop system modelling for better understanding of climate change impact, and adaptation strategies for Italian cropping systems) initiated in 2013 with the primary aim of implementing data from 16 long term Italian agronomic experiments in a common, interoperable structure. The building of a common database (DB) structure demands a harmonization process aimed at standardising concepts, language and data in order to make them clear, and has to produce a well-documented and easily available tool for the whole scientific community. The Agricultural Model Intercomparison and Improvement Project (AgMIP) has made a great effort in this sense, improving the vocabulary developed by the International Consortium for Agricultural Systems Applications (ICASA) and defining harmonization procedures. Nowadays, these ones have also to be addressed to facilitate the extraction of input files for crop model simulations. Substantially, two alternative directions can be pursued: adapting data to models, building a standard storage structure and using translators that convert DB information to model input files; or adapting models to data, using the same storage structure for feeding modelling solutions constituted by combining model components, re-implemented in the same model platform. The ICFAR information management system simplifies data entry, improves model input extraction (implementing System Dynamics ontology), and satisfies both the paradigms. This has required the development of different software tools: ICFAR-DB for data entry and storage; a model input extractor for feeding the crop models (MoLInEx); SEMoLa platform for building modelling solutions and performing via scripts the model intercomparison. The use of the standard AgMIP/ICASA nomenclature in the ICFAR-DB and the opportunity to create files with MoLInex for feeding AgMIP model translators allow full system interoperability.
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