Ben Touhami, H., & Bellocchi, G. (2015). Bayesian calibration of the Pasture Simulation model (PaSim) to simulate European grasslands under water stress. Ecological Informatics, 30, 356–364.
Abstract: As modeling becomes a more widespread practice in the agro-environmental sciences, scientists need reliable tools to calibrate models against ever more complex and detailed data. We present a generic Bayesian computation framework for grassland simulation, which enables parameter estimation in the Bayesian formalism by using Monte Carlo approaches. We outline the underlying rationale, discuss the computational issues, and provide results from an application of the Pasture Simulation model (PaSim) to three European grasslands. The framework was suited to investigate the challenging problem of calibrating complex biophysical models to data from altered scenarios generated by precipitation reduction (water stress conditions). It was used to infer the parameters of manipulated grassland systems and to assess the gain in uncertainty reduction by updating parameter distributions using measurements of the output variables.
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Ma, S., Lardy, R., Graux, A. - I., Ben Touhami, H., Klumpp, K., Martin, R., et al. (2015). Regional-scale analysis of carbon and water cycles on managed grassland systems. Env. Model. Softw., 72, 356–371.
Abstract: Predicting regional and global carbon (C) and water dynamics on grasslands has become of major interest, as grasslands are one of the most widespread vegetation types worldwide, providing a number of ecosystem services (such as forage production and C storage). The present study is a contribution to a regional-scale analysis of the C and water cycles on managed grasslands. The mechanistic biogeochemical model PaSim (Pasture Simulation model) was evaluated at 12 grassland sites in Europe. A new parameterization was obtained on a common set of eco-physiological parameters, which represented an improvement of previous parameterization schemes (essentially obtained via calibration at specific sites). We found that C and water fluxes estimated with the parameter set are in good agreement with observations. The model with the new parameters estimated that European grassland are a sink of C with 213 g C m(-2) yr(-1), which is close to the observed net ecosystem exchange (NEE) flux of the studied sites (185 g C m(-2) yr(-1) on average). The estimated yearly average gross primary productivity (GPP) and ecosystem respiration (RECO) for all of the study sites are 1220 and 1006 g C m(-2) yr(-1), respectively, in agreement with observed average GPP (1230 g C m(-2) yr(-1)) and RECO (1046 g C m(-2) yr(-1)). For both variables aggregated on a weekly basis, the root mean square error (RMSE) was similar to 5-16 g C week(-1) across the study sites, while the goodness of fit (R-2) was similar to 0.4-0.9. For evapotranspiration (ET), the average value of simulated ET (415 mmyr(-1)) for all sites and years is close to the average value of the observed ET (451 mm yr(-1)) by flux towers (on a weekly basis, RMSE similar to 2-8 mm week(-1); R-2 = 0.3-0.9). However, further model development is needed to better represent soil water dynamics under dry conditions and soil temperature in winter. A quantification of the uncertainties introduced by spatially generalized parameter values in C and water exchange estimates is also necessary. In addition, some uncertainties in the input management data call for the need to improve the quality of the observational system.
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Sándor, R., Ma, S., Acutis, M., Barcza, Z., Ben Touhami, H., Doro, L., et al. (2015). Uncertainty in simulating biomass yield and carbon–water fluxes from grasslands under climate change. Advances in Animal Biosciences, 6(01), 49–51.
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Ben Touhami, H., & Bellocchi, G. (2014). Bayesian calibration of the Pasture Simulation model (PaSim) to simulate emissions from long-term grassland sites: a European perspective..
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Bellocchi, G., Martin, R., Shtiliyanova, A., Ben Touhami, H., & Carrère, P. (2014). Vul’Clim – Climate change vulnerability studies in the region Auvergne (France) (Vol. 3).
Abstract: The region Auvergne (France) is a major livestock territory in Europe (beef and dairy cattle with permanent grasslands), with a place in climate change regional studies assisting policy makers and actors in identifying adaptation and mitigation measures. Vul’Clim is a research grant (Bourse Recherche Filière) of the region Auvergne (February 2014-September 2015) to develop model-based vulnerability analysis approaches for a detailed assessment of climate change impacts at regional scale. Its main goal is the creation of a computer-aided platform for vulnerability assessment of grasslands, in interaction with stakeholders from a cluster of eco-enterprises. A modelling engine provided by the mechanistic, biogeochemical model PaSim (Pasture Simulation model) is the core of the platform. An action studies the changes of scales by varying the granularity of the data available at a given scale (e.g. climate data supplied by global scenarios) to let them being exploited at another scale (e.g. high-resolution pixels). Another action is to develop an assessment framework linking modelling tools to entry data and outputs, including a variety of components: data-entry manager at different spatial resolutions; automatic computation of indicators; gap-filling and data quality check; simulation kernel with the model(s) used; device to represent results as maps and integrated indicators. No Label
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