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Author |
Rötter, R.P.; Tao, F.; Höhn, J.G.; Palosuo, T. |
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Title |
Use of crop simulation modelling to aid ideotype design of future cereal cultivars |
Type |
Journal Article |
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Year |
2015 |
Publication  |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3463-3476 |
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Keywords |
Breeding/*methods; Climate Change; *Computer Simulation; Ecotype; Edible Grain/*growth & development; *Models, Theoretical; cereals; climate extremes; crop growth simulation; ensemble modelling; future cultivars; genetic modelling; ideotype breeding; model improvement; model-aided design |
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Abstract |
A major challenge of the 21st century is to achieve food supply security under a changing climate and roughly a doubling in food demand by 2050 compared to present, the majority of which needs to be met by the cereals wheat, rice, maize, and barley. Future harvests are expected to be especially threatened through increased frequency and severity of extreme events, such as heat waves and drought, that pose particular challenges to plant breeders and crop scientists. Process-based crop models developed for simulating interactions between genotype, environment, and management are widely applied to assess impacts of environmental change on crop yield potentials, phenology, water use, etc. During the last decades, crop simulation has become important for supporting plant breeding, in particular in designing ideotypes, i.e. ‘model plants’, for different crops and cultivation environments. In this review we (i) examine the main limitations of crop simulation modelling for supporting ideotype breeding, (ii) describe developments in cultivar traits in response to climate variations, and (iii) present examples of how crop simulation has supported evaluation and design of cereal cultivars for future conditions. An early success story for rice demonstrates the potential of crop simulation modelling for ideotype breeding. Combining conventional crop simulation with new breeding methods and genetic modelling holds promise to accelerate delivery of future cereal cultivars for different environments. Robustness of model-aided ideotype design can further be enhanced through continued improvements of simulation models to better capture effects of extremes and the use of multi-model ensembles. |
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2016-10-31 |
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0022-0957 1460-2431 |
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Review |
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CropM, ft_macsur |
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no |
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Call Number |
MA @ admin @ |
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4804 |
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Author |
Comadira, G.; Rasool, B.; Karpinska, B.; Morris, J.; Verrall, S.R.; Hedley, P.E.; Foyer, C.H.; Hancock, R.D. |
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Title |
Nitrogen deficiency in barley (Hordeum vulgare) seedlings induces molecular and metabolic adjustments that trigger aphid resistance |
Type |
Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3639-3655 |
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Keywords |
Animals; Aphids/drug effects/*physiology; Biomass; Carbon/pharmacology; Chlorophyll/metabolism; Cluster Analysis; *Disease Resistance/drug effects; Gases/metabolism; Gene Expression Regulation, Plant/drug effects; Hordeum/drug effects/genetics/*parasitology; Nitrogen/*deficiency/metabolism/pharmacology; Oxidation-Reduction/drug effects; Photosynthesis/drug effects; Plant Diseases/genetics/*parasitology; Plant Leaves/drug effects/genetics/metabolism; Plant Proteins/genetics/metabolism; Plant Shoots/drug effects/metabolism; RNA, Messenger/genetics/metabolism; Secondary Metabolism/drug effects; Seedlings/drug effects/*metabolism/*parasitology; Signal Transduction/drug effects; Thylakoids/drug effects/metabolism/parasitology; Transcription Factors/metabolism; Transcriptome/genetics; Cross-tolerance; Myzus persicae; kinase cascades; metabolite profiles; nitrogen limitation; oxidative stress; sugar signalling |
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Abstract |
Agricultural nitrous oxide (N2O) pollution resulting from the use of synthetic fertilizers represents a significant contribution to anthropogenic greenhouse gas emissions, providing a rationale for reduced use of nitrogen (N) fertilizers. Nitrogen limitation results in extensive systems rebalancing that remodels metabolism and defence processes. To analyse the regulation underpinning these responses, barley (Horedeum vulgare) seedlings were grown for 7 d under N-deficient conditions until net photosynthesis was 50% lower than in N-replete controls. Although shoot growth was decreased there was no evidence for the induction of oxidative stress despite lower total concentrations of N-containing antioxidants. Nitrogen-deficient barley leaves were rich in amino acids, sugars and tricarboxylic acid cycle intermediates. In contrast to N-replete leaves one-day-old nymphs of the green peach aphid (Myzus persicae) failed to reach adulthood when transferred to N-deficient barley leaves. Transcripts encoding cell, sugar and nutrient signalling, protein degradation and secondary metabolism were over-represented in N-deficient leaves while those associated with hormone metabolism were similar under both nutrient regimes with the exception of mRNAs encoding proteins involved in auxin metabolism and responses. Significant similarities were observed between the N-limited barley leaf transcriptome and that of aphid-infested Arabidopsis leaves. These findings not only highlight significant similarities between biotic and abiotic stress signalling cascades but also identify potential targets for increasing aphid resistance with implications for the development of sustainable agriculture. |
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2016-10-31 |
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0022-0957 1460-2431 |
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CropM |
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Call Number |
MA @ admin @ |
Serial |
4787 |
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Author |
Halford, N.G.; Foyer, C.H. |
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Title |
Producing a road map that enables plants to cope with future climate change |
Type |
Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3433-3434 |
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0022-0957 |
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Editorial Material |
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CropM |
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MA @ admin @ |
Serial |
4704 |
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Author |
Ramirez-Villegas, J.; Watson, J.; Challinor, A.J. |
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Title |
Identifying traits for genotypic adaptation using crop models |
Type |
Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3451-3462 |
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Keywords |
Adaptation, Physiological/*genetics; Crops, Agricultural/*genetics; Environment; Genotype; *Models, Theoretical; *Quantitative Trait, Heritable; Climate change; crop models; genotypic adaptation; ideotypes; impacts |
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Abstract |
Genotypic adaptation involves the incorporation of novel traits in crop varieties so as to enhance food productivity and stability and is expected to be one of the most important adaptation strategies to future climate change. Simulation modelling can provide the basis for evaluating the biophysical potential of crop traits for genotypic adaptation. This review focuses on the use of models for assessing the potential benefits of genotypic adaptation as a response strategy to projected climate change impacts. Some key crop responses to the environment, as well as the role of models and model ensembles for assessing impacts and adaptation, are first reviewed. Next, the review describes crop-climate models can help focus the development of future-adapted crop germplasm in breeding programmes. While recently published modelling studies have demonstrated the potential of genotypic adaptation strategies and ideotype design, it is argued that, for model-based studies of genotypic adaptation to be used in crop breeding, it is critical that modelled traits are better grounded in genetic and physiological knowledge. To this aim, two main goals need to be pursued in future studies: (i) a better understanding of plant processes that limit productivity under future climate change; and (ii) a coupling between genetic and crop growth models-perhaps at the expense of the number of traits analysed. Importantly, the latter may imply additional complexity (and likely uncertainty) in crop modelling studies. Hence, appropriately constraining processes and parameters in models and a shift from simply quantifying uncertainty to actually quantifying robustness towards modelling choices are two key aspects that need to be included into future crop model-based analyses of genotypic adaptation. |
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0022-0957 1460-2431 |
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CropM, ftnotmacsur |
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Call Number |
MA @ admin @ |
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4645 |
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Author |
Stratonovitch, P.; Semenov, M.A. |
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Title |
Heat tolerance around flowering in wheat identified as a key trait for increased yield potential in Europe under climate change |
Type |
Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3599-3609 |
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Keywords |
Adaptation, Physiological; *Climate Change; Computer Simulation; Europe; Flowers/*physiology; *Hot Temperature; *Quantitative Trait, Heritable; Time Factors; Triticum/*growth & development/*physiology; Downscaling; LARS-WG weather generator; Sirius wheat model.; heat stress; ideotype design; impact assessment |
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Abstract |
To deliver food security for the 9 billon population in 2050, a 70% increase in world food supply will be required. Projected climatic and environmental changes emphasize the need for breeding strategies that delivers both a substantial increase in yield potential and resilience to extreme weather events such as heat waves, late frost, and drought. Heat stress around sensitive stages of wheat development has been identified as a possible threat to wheat production in Europe. However, no estimates have been made to assess yield losses due to increased frequency and magnitude of heat stress under climate change. Using existing experimental data, the Sirius wheat model was refined by incorporating the effects of extreme temperature during flowering and grain filling on accelerated leaf senescence, grain number, and grain weight. This allowed us, for the first time, to quantify yield losses resulting from heat stress under climate change. The model was used to optimize wheat ideotypes for CMIP5-based climate scenarios for 2050 at six sites in Europe with diverse climates. The yield potential for heat-tolerant ideotypes can be substantially increased in the future (e.g. by 80% at Seville, 100% at Debrecen) compared with the current cultivars by selecting an optimal combination of wheat traits, e.g. optimal phenology and extended duration of grain filling. However, at two sites, Seville and Debrecen, the grain yields of heat-sensitive ideotypes were substantially lower (by 54% and 16%) and more variable compared with heat-tolerant ideotypes, because the extended grain filling required for the increased yield potential was in conflict with episodes of high temperature during flowering and grain filling. Despite much earlier flowering at these sites, the risk of heat stress affecting yields of heat-sensitive ideotypes remained high. Therefore, heat tolerance in wheat is likely to become a key trait for increased yield potential and yield stability in southern Europe in the future. |
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0022-0957 1460-2431 |
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CropM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
4578 |
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