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Author |
Van Oijen, M.; Höglind, M. |
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Title |
Toward a Bayesian procedure for using process-based models in plant breeding, with application to ideotype design |
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Journal Article |
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Year |
2016 |
Publication |
Euphytica |
Abbreviated Journal |
Euphytica |
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Volume |
207 |
Issue |
3 |
Pages |
627-643 |
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Keywords |
BASGRA; cold tolerance; genotype-environment interaction; plant breeding; process-based modelling; yield stability; grassland productivity; timothy regrowth; climate-change; water-deficit; forest models; late blight; leaf-area; calibration; growth; tolerance |
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Abstract |
Process-based grassland models (PBMs) simulate growth and development of vegetation over time. The models tend to have a large number of parameters that represent properties of the plants. To simulate different cultivars of the same species, different parameter values are required. Parameter differences may be interpreted as genetic variation for plant traits. Despite this natural connection between PBMs and plant genetics, there are only few examples of successful use of PBMs in plant breeding. Here we present a new procedure by which PBMs can help design ideotypes, i.e. virtual cultivars that optimally combine properties of existing cultivars. Ideotypes constitute selection targets for breeding. The procedure consists of four steps: (1) Bayesian calibration of model parameters using data from cultivar trials, (2) Estimating genetic variation for parameters from the combination of cultivar-specific calibrated parameter distributions, (3) Identifying parameter combinations that meet breeding objectives, (4) Translating model results to practice, i.e. interpreting parameters in terms of practical selection criteria. We show an application of the procedure to timothy (Phleum pratense L.) as grown in different regions of Norway. |
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2016-10-31 |
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0014-2336 |
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CropM, ft_macsur |
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MA @ admin @ |
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4820 |
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Author |
Tao, F.; Zhang, Z.; Zhang, S.; Rötter, R.P.; Shi, W.; Xiao, D.; Liu, Y.; Wang, M.; Liu, F.; Zhang, H. |
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Title |
Historical data provide new insights into response and adaptation of maize production systems to climate change/variability in China |
Type |
Journal Article |
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Year |
2016 |
Publication |
Field Crops Research |
Abbreviated Journal |
Field Crops Research |
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Volume |
185 |
Issue |
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Pages |
1-11 |
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Keywords |
china; climate variability; grain yield; impact; maize; northeast china; tropical maize; wheat yields; heat-stress; crop yields; temperature; impacts; sensitivities; hybrids; trends |
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Abstract |
Extensive studies had been conducted to investigate the impacts of climate change on maize growth and yield in recent decades; however, the dynamics of crop husbandry in response and adaptation to climate change were not taken into account. Based on field observations spanning from 1981 to 2009 at 167 agricultural meteorological stations across China, we found that solar radiation and temperature over the observed maize growth period had decreasing trends during 1981-2009, and maize yields were positively correlated with these climate variables in major production regions. The decreasing trends in solar radiation and temperature during maize growth period were mainly ascribed to the adoption of late maturity cultivars with longer reproductive growth period (RGP). The adoption of late maturing cultivars with longer RGP contributed substantially to grain yield increase during the last three decades. The climate trends during maize growth period varied among different production areas. During 1981-2009, decreases in mean temperature, precipitation and solar radiation over maize growth period jointly reduced yield most by 13.2-17.3% in southwestern China, by contrast in northwestern China increases in mean temperature, precipitation and solar radiation jointly increased yield most by 12.9-14.4%. Our findings highlight that the adaptations of maize production system to climate change through shifts of sowing date and genotypes are underway and should be taken into accounted when evaluating climate change impacts. (C) 2015 Elsevier B.V. All rights reserved. |
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2016-10-31 |
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0378-4290 |
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CropM, ft_macsur |
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MA @ admin @ |
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4816 |
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Author |
Toscano, P.; Genesio, L.; Crisci, A.; Vaccari, F.P.; Ferrari, E.; La Cava, P.; Porter, J.R.; Gioli, B. |
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Title |
Empirical modelling of regional and national durum wheat quality |
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Journal Article |
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Year |
2015 |
Publication |
Agricultural and Forest Meteorology |
Abbreviated Journal |
Agricultural and Forest Meteorology |
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204 |
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67-78 |
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Keywords |
durum wheat; grain protein content; forecasting tool; modelling; gridded data; red winter-wheat; grain quality; climate-change; mediterranean conditions; interannual variability; protein-composition; co2 concentration; vapor-pressure; carbon-dioxide; crop yield |
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Abstract |
The production of durum wheat in the Mediterranean basin is expected to experience increased variability in yield and quality as a consequence of climate change. To assess how environmental variables and agronomic practices affect grain protein content (GPC), a novel approach based on monthly gridded input data has been implemented to develop empirical model, and validated on historical time series to assess its capability to reproduce observed spatial and inter-annual GPC variability. The model was applied in four Italian regions and at the whole national scale and proved reliable and usable for operational purposes also in a forecast ‘real-time’ mode before harvesting. Precipitable water during autumn to winter and air temperature from anthesis to harvest were extremely important influences on GPC; these and additional variables, included in a linear model, were able to account for 95% of the variability in GPC that has occurred in the last 15 years in Italy. Our results are a unique example of the use of modelling as a predictive real-time platform and are a useful tool to understand better and forecast the impacts of future climate change projections on durum wheat production and quality. |
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2016-10-31 |
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ISSN |
0168-1923 |
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CropM, ft_macsur |
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MA @ admin @ |
Serial |
4818 |
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Author |
Ruane, A.C.; Hudson, N.I.; Asseng, S.; Camarrano, D.; Ewert, F.; Martre, P.; Boote, K.J.; Thorburn, P.J.; Aggarwal, P.K.; Angulo, C.; Basso, B.; Bertuzzi, P.; Biernath, C.; Brisson, N.; Challinor, &rew J.; Doltra, J.; Gayler, S.; Goldberg, R.; Grant, R.F.; Heng, L.; Hooker, J.; Hunt, L.A.; Ingwersen, J.; Izaurralde, R.C.; Kersebaum, K.C.; Kumar, S.N.; Müller, C.; Nendel, C.; O’Leary, G.; Olesen, J.E.; Osborne, T.M.; Palosuo, T.; Priesack, E.; Ripoche, D.; Rötter, R.P.; Semenov, M.A.; Shcherbak, I.; Steduto, P.; Stöckle, C.O.; Stratonovitch, P.; Streck, T.; Supit, I.; Tao, F.; Travasso, M.; Waha, K.; Wallach, D.; White, J.W.; Wolf, J. |
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Title |
Multi-wheat-model ensemble responses to interannual climate variability |
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Journal Article |
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Year |
2016 |
Publication |
Environmental Modelling & Software |
Abbreviated Journal |
Env. Model. Softw. |
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Volume |
81 |
Issue |
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Pages |
86-101 |
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Keywords |
Crop modeling; Uncertainty; Multi-model ensemble; Wheat; AgMIP; Climate; impacts; Temperature; Precipitation; lnterannual variability; simulation-model; crop model; nitrogen dynamics; winter-wheat; large-area; systems simulation; farming systems; yield response; growth; water |
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Abstract |
We compare 27 wheat models’ yield responses to interannual climate variability, analyzed at locations in Argentina, Australia, India, and The Netherlands as part of the Agricultural Model Intercomparison and Improvement Project (AgMIP) Wheat Pilot. Each model simulated 1981-2010 grain yield, and we evaluate results against the interannual variability of growing season temperature, precipitation, and solar radiation. The amount of information used for calibration has only a minor effect on most models’ climate response, and even small multi-model ensembles prove beneficial. Wheat model clusters reveal common characteristics of yield response to climate; however models rarely share the same cluster at all four sites indicating substantial independence. Only a weak relationship (R-2 <= 0.24) was found between the models’ sensitivities to interannual temperature variability and their response to long-term warming, suggesting that additional processes differentiate climate change impacts from observed climate variability analogs and motivating continuing analysis and model development efforts. Published by Elsevier Ltd. |
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1364-8152 |
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CropM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
4769 |
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Author |
Xiao, D.P.; Tao, F.L. |
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Title |
Contributions of cultivar shift, management practice and climate change to maize yield in North China Plain in 1981-2009 |
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Journal Article |
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Year |
2016 |
Publication |
International Journal of Biometeorology |
Abbreviated Journal |
International Journal of Biometeorology |
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Volume |
60 |
Issue |
7 |
Pages |
1111-1122 |
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Keywords |
Adaptation; Agronomic practice; Maize yield; Negative impact; Climate; change; model; variability; performance; simulation; province; apsim; gaps |
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Abstract |
The impact of climate change on crop yield is compounded by cultivar shifts and agronomic management practices. To determine the relative contributions of climate change, cultivar shift, and management practice to changes in maize (Zea mays L.) yield in the past three decades, detailed field data for 1981-2009 from four representative experimental stations in North China Plain (NCP) were analyzed via model simulation. The four representative experimental stations are geographically and climatologically different, represent the typical cropping system in the study area, and have more complete weather/crop records for the period of 1981-2009. The results showed that while the shift from traditional to modern cultivar increased yield by 23.9-40.3 %, new fertilizer management increased yield by 3.3-8.6 %. However, the trends in climate variables for 1981-2009 reduced maize yield by 15-30 % in the study area. Among the main climate variables, solar radiation had the largest effect on maize yield, followed by temperature and then precipitation. While a significant decline in solar radiation in 1981-2009 (maybe due to air pollution) reduced yield by 12-24 %, a significant increase in temperature reduced yield by 3-9 %. In contrast, a non-significant increase in precipitation during the maize growth period increased yield by 0.9-3 % at three of the four investigated stations. However, a decline in precipitation reduced yield by 3 % in the remaining station. The study revealed that although the shift from traditional to modern cultivars and agronomic management practices contributed most to the increase in maize yield, the negative impact of climate change was large enough to offset 46-67 % of the trend in the observed yields in the past three decades in NCP. The reduction in solar radiation, especially in the most critical period of maize growth, limited the process of photosynthesis and thereby further reduced maize yield. |
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2016-09-13 |
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0020-7128 |
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CropM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
4779 |
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