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Author |
Crout, N.M.J.; Craigon, J.; Cox, G.M.; Jao, Y.; Tarsitano, D.; Wood, A.T.A.; Semenov, M. |
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Title |
An objective approach to model reduction: Application to the Sirius wheat model |
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Journal Article |
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Year |
2014 |
Publication |
Agricultural and Forest Meteorology |
Abbreviated Journal |
Agricultural and Forest Meteorology |
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Volume |
189-190 |
Issue |
100 |
Pages  |
211-219 |
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Keywords |
Complexity; Crop model; Evaluation; Model reduction; Parsimony; Wheat |
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Abstract |
An existing simulation model of wheat growth and development, Sirius, was evaluated through a systematic model reduction procedure. The model was automatically manipulated under software control to replace variables within the model structure with constants, individually and in combination. Predictions of the resultant models were compared to growth analysis observations of total biomass, grain yield, and canopy leaf area derived from 9 trials conducted in the UK and New Zealand under optimal, nitrogen limiting and drought conditions. Model performance in predicting these observations was compared in order to evaluate whether individual model variables contributed positively to the overall prediction. Of the 1 1 1 model variables considered 16 were identified as potentially redundant. Areas of the model where there was evidence of redundancy were: (a) translocation of biomass carbon to grain; (b) nitrogen physiology; (c) adjustment of air temperature for various modelled processes; (d) allowance for diurnal variation in temperature; (e) vernalisation (f) soil nitrogen mineralisation (g) soil surface evaporation. It is not suggested that these are not important processes in real crops, rather, that their representation in the model cannot be justified in the context of the analysis. The approach described is analogous to a detailed model inter-comparison although it would be better described as a model intra-comparison as it is based on the comparison of many simplified forms of the same model. The approach provides automation to increase the efficiency of the evaluation and a systematic means of increasing the rigour of the evaluation. |
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2016-10-31 |
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English |
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ISSN |
0168-1923 |
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Article |
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CropM |
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Call Number |
MA @ admin @ |
Serial |
4788 |
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Author |
Fronzek, S.; Pirttioja, N.; Carter, T.R.; Bindi, M.; Hoffmann, H.; Palosuo, T.; Ruiz-Ramos, M.; Tao, F.; Trnka, M.; Acutis, M.; Asseng, S.; Baranowski, P.; Basso, B.; Bodin, P.; Buis, S.; Cammarano, D.; Deligios, P.; Destain, M.-F.; Dumont, B.; Ewert, F.; Ferrise, R.; Francois, L.; Gaiser, T.; Hlavinka, P.; Jacquemin, I.; Kersebaum, K.C.; Kollas, C.; Krzyszczaki, J.; Lorite, I.J.; Minet, J.; Ines Minguez, M.; Montesino, M.; Moriondo, M.; Mueller, C.; Nendel, C.; Ozturk, I.; Perego, A.; Rodriguez, A.; Ruane, A.C.; Ruget, F.; Sanna, M.; Semenov, M.A.; Slawinski, C.; Stratonovitch, P.; Supit, I.; Waha, K.; Wang, E.; Wu, L.; Zhao, Z.; Rotter, R.P. |
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Title |
Classifying multi-model wheat yield impact response surfaces showing sensitivity to temperature and precipitation change |
Type |
Journal Article |
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Year |
2018 |
Publication |
Agricultural Systems |
Abbreviated Journal |
Agric. Syst. |
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Volume |
159 |
Issue |
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Pages |
209-224 |
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Keywords |
Classification; Climate change; Crop model; Ensemble; Sensitivity analysis; Wheat; Climate-Change; Crop Models; Probabilistic Assessment; Simulating; Impacts; British Catchments; Uncertainty; Europe; Productivity; Calibration; Adaptation |
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Abstract |
Crop growth simulation models can differ greatly in their treatment of key processes and hence in their response to environmental conditions. Here, we used an ensemble of 26 process-based wheat models applied at sites across a European transect to compare their sensitivity to changes in temperature (-2 to +9 degrees C) and precipitation (-50 to +50%). Model results were analysed by plotting them as impact response surfaces (IRSs), classifying the IRS patterns of individual model simulations, describing these classes and analysing factors that may explain the major differences in model responses. The model ensemble was used to simulate yields of winter and spring wheat at four sites in Finland, Germany and Spain. Results were plotted as IRSs that show changes in yields relative to the baseline with respect to temperature and precipitation. IRSs of 30-year means and selected extreme years were classified using two approaches describing their pattern. The expert diagnostic approach (EDA) combines two aspects of IRS patterns: location of the maximum yield (nine classes) and strength of the yield response with respect to climate (four classes), resulting in a total of 36 combined classes defined using criteria pre-specified by experts. The statistical diagnostic approach (SDA) groups IRSs by comparing their pattern and magnitude, without attempting to interpret these features. It applies a hierarchical clustering method, grouping response patterns using a distance metric that combines the spatial correlation and Euclidian distance between IRS pairs. The two approaches were used to investigate whether different patterns of yield response could be related to different properties of the crop models, specifically their genealogy, calibration and process description. Although no single model property across a large model ensemble was found to explain the integrated yield response to temperature and precipitation perturbations, the application of the EDA and SDA approaches revealed their capability to distinguish: (i) stronger yield responses to precipitation for winter wheat than spring wheat; (ii) differing strengths of response to climate changes for years with anomalous weather conditions compared to period-average conditions; (iii) the influence of site conditions on yield patterns; (iv) similarities in IRS patterns among models with related genealogy; (v) similarities in IRS patterns for models with simpler process descriptions of root growth and water uptake compared to those with more complex descriptions; and (vi) a closer correspondence of IRS patterns in models using partitioning schemes to represent yield formation than in those using a harvest index. Such results can inform future crop modelling studies that seek to exploit the diversity of multi-model ensembles, by distinguishing ensemble members that span a wide range of responses as well as those that display implausible behaviour or strong mutual similarities. |
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2018-01-25 |
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ISSN |
0308-521x |
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Notes |
CropM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
5186 |
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Author |
Mäkinen, H.; Kaseva, J.; Trnka, M.; Balek, J.; Kersebaum, K.C.; Nendel, C.; Gobin, A.; Olesen, J.E.; Bindi, M.; Ferrise, R.; Moriondo, M.; Rodriguez, A.; Ruiz-Ramos, M.; Takáč, J.; Bezák, P.; Ventrella, D.; Ruget, F.; Capellades, G.; Kahiluoto, H. |
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Title |
Sensitivity of European wheat to extreme weather |
Type |
Journal Article |
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Year |
2018 |
Publication |
Field Crops Research |
Abbreviated Journal |
Field Crops Research |
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Volume |
222 |
Issue |
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Pages |
209-217 |
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Keywords |
European wheat; Cultivar; Weather; Extreme; Climate change; Yield response; High-Temperature; Heat-Stress; Use Efficiency; Growth-Stages; Winter-Wheat; Yield; Crop; Barley; Tolerance |
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Abstract |
The frequency and intensity of extreme weather is increasing concomitant with changes in the global climate change. Although wheat is the most important food crop in Europe, there is currently no comprehensive empirical information available regarding the sensitivity of European wheat to extreme weather. In this study, we assessed the sensitivity of European wheat yields to extreme weather related to phenology (sowing, heading) in cultivar trials across Europe (latitudes 37.21 degrees to 61.34 degrees and longitudes- 6.02 degrees to 26.24 degrees) during the period 1991-2014. All the observed agro-climatic extremes (>= 31 degrees C, >= 35 degrees C, or drought around heading; >= 35 degrees C from heading to maturity; excessive rainfall; heavy rainfall and low global radiation) led to marked yield penalties in a selected set of European cultivars, whereas few cultivars were found to with no yield penalty in such conditions. There were no European wheat cultivars that responded positively (+ 10%) to drought after sowing, or frost during winter (- 15 degrees C and – 20 degrees C). Positive responses to extremes were often shown by cultivars associated with specific regions, such as good performance under high temperatures by southern-origin cultivars. Consequently, a major future breeding challenge will be to evaluate the potential of combining such cultivar properties with other properties required under different growing conditions with, for example, long day conditions at higher latitudes, when the intensity and frequency of extremes rapidly increase. |
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2018-06-05 |
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Series Issue |
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ISSN |
0378-4290 |
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Notes |
CropM, ft_macsur |
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no |
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Call Number |
MA @ admin @ |
Serial |
5200 |
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Author |
Lai, R.; Arca, P.; Lagomarsino, A.; Cappai, C.; Seddaiu, G.; Demurtas, C.E.; Roggero, P.P. |
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Title |
Manure fertilization increases soil respiration and creates a negative carbon budget in a Mediterranean maize (Zea mays L.)-based cropping system |
Type |
Journal Article |
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Year |
2017 |
Publication |
Catena |
Abbreviated Journal |
Catena |
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Volume |
151 |
Issue |
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Pages |
202-212 |
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Keywords |
Biomass; C turnover; GHG emission; Microbial activity; Soil moisture; Organic-Matter Dynamics; Co2 Efflux; N Fertilization; Forage Systems; Winter-Wheat; Nitrogen; Temperature; Forest; Water; Root |
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Abstract |
Agronomic research is important to identify suitable options for improving soil carbon (C) sequestration and reducing soil CO2 emissions. Therefore, the objectives of this study were i) to analyse the on-farm effects of different nitrogen fertilization sources on soil respiration, ii) to explore the effect of fertilization on soil respiration sensitivity to soil temperature (T) and iii) to assess the effect of the different fertilization regimes on the soil C balance. We hypothesized that i) the soil CO2 emission dynamics in Mediterranean irrigated cropping systems were mainly affected by fertilization management and T and ii) fertilization affected the soil C budget via different C inputs and CO2 efflux. Four fertilization systems (farmyard manure, cattle slurry, cattle slurry + mineral, and mineral) were compared in a double-crop rotation based on silage maize (Zea mays L) and a mixture of Italian ryegrass (Lolium multiflorum Lam.) and oats (Avena sativa L). The research was performed in the dairy district of Arborea, in the coastal zone of Sardinia (Italy), from May 2011 to May 2012. The soil was a Psammentic Palexeralfs with a sandy texture (940 g sand kg(-1)). The soil total respiration (SR), heterotrophic respiration (Rh), T and soil water content (SWC) were simultaneously measured in situ. The soil C balance was computed considering the Rh C losses and the soil C inputs from fertilizer and crop residues. The results showed that the maximum soil CO2 emission rates soon after the application of organic fertilizer reached values up to 121,1111 1 111(-2) s(-1). On average, the manure fertilizer showed significantly higher CO2 emissions, which resulted in a negative annual C balance (-2.9 t ha(-1)). T also affected the soil respiration temporal dynamics during the summer, consistently with results obtained in other temperate climatic regions that are characterized by wet summers and contrary to results from rainfed Mediterranean systems where the summer SR and Rh are constrained by the low SWC. The sensitivity of soil respiration to temperature significantly increased with C input from fertilizer. In conclusion, this research supported the hypotheses tested. Furthermore, the results indicated that i) soil CO2 efflux was significantly affected by fertilization management and T, and ii) fertilization with manure increased the soil respiration and resulted in a significantly negative soil C budget. This latter finding could be primarily explained by a reduction in productivity and, consequently, in crop residue with organic fertilization alone as compared to mineral, by the favourable SWC and T for mineralization, and by the sandy soil texture, which hindered the formation of macroaggregates and hence soil C stabilization, making fertilizer organic inputs highly susceptible to mineralization. (C) 2016 Elsevier B.V. All rights reserved. |
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2017-03-16 |
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ISSN |
0341-8162 |
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Notes |
CropM, ft_MACSUR |
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no |
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Call Number |
MA @ admin @ |
Serial |
4939 |
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Author |
Hlavinka, P.; Trnka, M.; Kersebaum, K.C.; Cermák, P.; Pohanková, E.; Orság, M.; Pokorný, E.; Fischer, M.; Brtnický, M.; Žalud, Z. |
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Modelling of yields and soil nitrogen dynamics for crop rotations by HERMES under different climate and soil conditions in the Czech Republic |
Type |
Journal Article |
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Year |
2014 |
Publication |
Journal of Agricultural Science |
Abbreviated Journal |
J. Agric. Sci. |
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Volume |
152 |
Issue |
02 |
Pages |
188-204 |
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Keywords |
winter oilseed rape; spring barley; central-europe; growth; simulation; wheat; adaptation; impact; water; agriculture |
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Abstract |
The crop growth model HERMES was used to model crop rotation cycles at 12 experimental sites in the Czech Republic. A wide range of crops (spring and winter barley, winter wheat, maize, potatoes, sugar beet, winter rape, oats, alfalfa and grass), cultivated between 1981 and 2009 under various soil and climatic conditions, were included. The model was able to estimate the yields of field crop rotations at a reasonable level, with an index of agreement (IA) ranging from 0.82 to 0.96 for the calibration database (the median coefficient of determination (R-2) was 0.71), while IA for verification varied from 0.62 to 0.93 (median R-2 was 0.78). Grass yields were also estimated at a reasonable level of accuracy. The estimates were less accurate for the above-ground biomass at harvest (the medians for IA were 0.76 and 0.72 for calibration and verification, respectively, and analogous medians of R-2 were 0.50 and 0.49). The soil mineral nitrogen (N) content under the field crops was simulated with good precision, with the IA ranging from 0.49 to 0.74 for calibration and from 0.43 to 0.68 for verification. Generally, the soil mineral N was underestimated, and more accurate results were achieved at locations with intensive fertilization. Simulated yields, soil N, water and organic carbon (C) contents were compared with long-term field measurements at Ne. mc. ice, located within the fertile Moravian lowland. At this station, all of the observed parameters were reproduced with a reasonable level of accuracy. In the case of the organic C content, HERMES reproduced a decrease ranging from c. 85 to 77 tonnes (t)/ha (for the 0-0.3 m soil layer) between the years 1980 and 2007. In spite of its relatively simple approach and restricted input data, HERMES was proven to be robust across various conditions, which is a precondition for its future use for both theoretical and practical purposes. |
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0021-8596 1469-5146 |
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CropM |
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MA @ admin @ |
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4626 |
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