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Author |
Schauberger, B.; Rolinski, S.; Müller, C. |
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Title |
A network-based approach for semi-quantitative knowledge mining and its application to yield variability |
Type |
Journal Article |
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Year |
2016 |
Publication |
Environmental Research Letters |
Abbreviated Journal |
Environ. Res. Lett. |
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Volume |
11 |
Issue |
12 |
Pages |
123001 |
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Keywords |
yield variability; crop models; interaction network; plant process; wheat; maize; rice; Global Food Security; Climate-Change; Crop Production; Stress Tolerance; Wheat Yields; Heat-Stress; Temperature Variability; Environmental-Factors; United-States; Elevated CO2 |
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Abstract |
Variability of crop yields is detrimental for food security. Under climate change its amplitude is likely to increase, thus it is essential to understand the underlying causes and mechanisms. Crop models are the primary tool to project future changes in crop yields under climate change. Asystematic overview of drivers and mechanisms of crop yield variability (YV) can thus inform crop model development and facilitate improved understanding of climate change impacts on crop yields. Yet there is a vast body of literature on crop physiology and YV, which makes a prioritization of mechanisms for implementation in models challenging. Therefore this paper takes on a novel approach to systematically mine and organize existing knowledge from the literature. The aim is to identify important mechanisms lacking in models, which can help to set priorities in model improvement. We structure knowledge from the literature in a semi-quantitative network. This network consists of complex interactions between growing conditions, plant physiology and crop yield. We utilize the resulting network structure to assign relative importance to causes of YV and related plant physiological processes. As expected, our findings confirm existing knowledge, in particular on the dominant role of temperature and precipitation, but also highlight other important drivers of YV. More importantly, our method allows for identifying the relevant physiological processes that transmit variability in growing conditions to variability in yield. We can identify explicit targets for the improvement of crop models. The network can additionally guide model development by outlining complex interactions between processes and by easily retrieving quantitative information for each of the 350 interactions. We show the validity of our network method as a structured, consistent and scalable dictionary of literature. The method can easily be applied to many other research fields. |
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2017-04-07 |
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ISSN |
1748-9326 |
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Review |
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CropM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
4942 |
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Author |
Mäkinen, H.; Kaseva, J.; Trnka, M.; Balek, J.; Kersebaum, K.C.; Nendel, C.; Gobin, A.; Olesen, J.E.; Bindi, M.; Ferrise, R.; Moriondo, M.; Rodriguez, A.; Ruiz-Ramos, M.; Takáč, J.; Bezák, P.; Ventrella, D.; Ruget, F.; Capellades, G.; Kahiluoto, H. |
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Title |
Sensitivity of European wheat to extreme weather |
Type |
Journal Article |
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Year |
2018 |
Publication |
Field Crops Research |
Abbreviated Journal |
Field Crops Research |
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Volume |
222 |
Issue |
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Pages |
209-217 |
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Keywords |
European wheat; Cultivar; Weather; Extreme; Climate change; Yield response; High-Temperature; Heat-Stress; Use Efficiency; Growth-Stages; Winter-Wheat; Yield; Crop; Barley; Tolerance |
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Abstract |
The frequency and intensity of extreme weather is increasing concomitant with changes in the global climate change. Although wheat is the most important food crop in Europe, there is currently no comprehensive empirical information available regarding the sensitivity of European wheat to extreme weather. In this study, we assessed the sensitivity of European wheat yields to extreme weather related to phenology (sowing, heading) in cultivar trials across Europe (latitudes 37.21 degrees to 61.34 degrees and longitudes- 6.02 degrees to 26.24 degrees) during the period 1991-2014. All the observed agro-climatic extremes (>= 31 degrees C, >= 35 degrees C, or drought around heading; >= 35 degrees C from heading to maturity; excessive rainfall; heavy rainfall and low global radiation) led to marked yield penalties in a selected set of European cultivars, whereas few cultivars were found to with no yield penalty in such conditions. There were no European wheat cultivars that responded positively (+ 10%) to drought after sowing, or frost during winter (- 15 degrees C and – 20 degrees C). Positive responses to extremes were often shown by cultivars associated with specific regions, such as good performance under high temperatures by southern-origin cultivars. Consequently, a major future breeding challenge will be to evaluate the potential of combining such cultivar properties with other properties required under different growing conditions with, for example, long day conditions at higher latitudes, when the intensity and frequency of extremes rapidly increase. |
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2018-06-05 |
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0378-4290 |
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CropM, ft_macsur |
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Call Number |
MA @ admin @ |
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5200 |
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Author |
Cirillo, V.; Masin, R.; Maggio, A.; Zanin, G. |
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Title |
Crop-weed interactions in saline environments |
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Journal Article |
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Year |
2018 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
Europ. J. Agron. |
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Volume |
99 |
Issue |
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Pages |
51-61 |
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Keywords |
Salinity; Weeds; Abiotic stress; Crop management; Salt stress; Echinochloa-Crus-Galli; Portulaca Oleracea L.; Seed-Germination; Soil-Salinity; Salt Tolerance; Stress Tolerance; Chenopodium-Album; Chemical-Composition; Southern Australia; Microbial Biomass |
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Abstract |
Soil salinization is one of the most critical environmental factors affecting crop yield. It is estimated that 20% of cultivated land and 33% of irrigated agricultural land are affected by salinity. In the last decades, considerable effort to manage saline agro-ecosystems has focused on 1) controlling soil salinity to minimize/reduce the accumulation of salts in the root zone and 2) improving plants ability to cope with osmotic and ionic stress. Less attention has been given to other components of the agro-ecosystem including weed populations, which also react and adapt to soil salinization and indirectly affect plant growth and yield. Weeds represent an increasing challenge for crop systems since they have high genetic resilience and adaptation ability to adverse environmental conditions such as soil salinization. In this review, we assess current knowledge on salinity tolerance of weeds in agricultural contexts and discuss critical components of crop-weed interactions that may increase weeds competitiveness under salinity. Compared to crop species, weeds generally exhibit greater salt tolerance due to high intraspecific variability, associated with diverse physiological adaptation mechanisms (e.g. phenotipic plasticity, seed heteromorphism, allelopathy). Weed competitiveness in saline soils may be enhanced by their earlier emergence, faster growth rates and synergies occurring between soil salts and allelochemicals released by weeds. In the future, a better understanding of crop-weed relationships and molecular, physiological and agronomic stress responses under salinity is essential to design efficient strategies to achieve weed control under altered climatic and environmental conditions. |
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2018-09-20 |
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ISSN |
1161-0301 |
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CropM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
5209 |
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Author |
Lipiec, J.; Doussan, C.; Nosalewicz, A.; Kondracka, K. |
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Title |
Effect of drought and heat stresses on plant growth and yield: a review |
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Journal Article |
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Year |
2013 |
Publication |
International Agrophysics |
Abbreviated Journal |
International Agrophysics |
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Volume |
27 |
Issue |
4 |
Pages |
463-477 |
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Keywords |
water stress; high temperature; root and shoot; growth; tolerance mechanisms; management practices; water-use efficiency; soil physical-properties; abscisic-acid; high-temperature; root systems; hydraulic architecture; conservation tillage; photosystem-ii; l. genotypes; drying soil |
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Abstract |
Drought and heat stresses are important threat limitations to plant growth and sustainable agriculture worldwide. Our objective is to provide a review of plant responses and adaptations to drought and elevated temperature including roots, shoots, and final yield and management approaches for alleviating adverse effects of the stresses based mostly on recent literature. The sections of the paper deal with plant responses including root growth, transpiration, photosynthesis, water use efficiency, phenotypic flexibility, accumulation of compounds of low molecular mass (eg proline and gibberellins), and expression of some genes and proteins for increasing the tolerance to the abiotic stresses. Soil and crop management practices to alleviate negative effects of drought and heat stresses are also discussed. Investigations involving determination of plant assimilate partitioning, phenotypic plasticity, and identification of most stress- tolerant plant genotypes are essential for understanding the complexity of the responses and for future plant breeding. The adverse effects of drought and heat stress can be mitigated by soil management practices, crop establishment, and foliar application of growth regulators by maintaining an appropriate level of water in the leaves due to osmotic adjustment and stomatal performance. |
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ISSN |
0236-8722 |
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CropM, ft_macsur |
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Call Number |
MA @ admin @ |
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4608 |
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Author |
Quain, M.D.; Makgopa, M.E.; Marquez-Garcia, B.; Comadira, G.; Fernandez-Garcia, N.; Olmos, E.; Schnaubelt, D.; Kunert, K.J.; Foyer, C.H. |
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Title |
Ectopic phytocystatin expression leads to enhanced drought stress tolerance in soybean (Glycine max) and Arabidopsis thaliana through effects on strigolactone pathways and can also result in improved seed traits |
Type |
Journal Article |
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Year |
2014 |
Publication |
Plant Biotechnology Journal |
Abbreviated Journal |
Plant Biotechnol. J. |
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Volume |
12 |
Issue |
7 |
Pages |
903-913 |
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Keywords |
Arabidopsis/*genetics/metabolism/physiology; Carbon Dioxide/metabolism; Chlorophyll/metabolism; Cystatins/*genetics/metabolism/physiology; Droughts; Lactones/*metabolism; Oryza/genetics; Phenotype; Plant Proteins/*genetics/metabolism/physiology; Seeds/genetics/metabolism/physiology; Soybeans/*genetics/metabolism/physiology; Stress, Physiological/*genetics; cystatin; cysteine protease; drought tolerance; photosynthesis; seed protein and yield; strigolactone |
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Abstract |
Ectopic cystatin expression has long been used in plant pest management, but the cysteine protease, targets of these inhibitors, might also have important functions in the control of plant lifespan and stress tolerance that remain poorly characterized. We therefore characterized the effects of expression of the rice cystatin, oryzacystatin-I (OCI), on the growth, development and stress tolerance of crop (soybean) and model (Arabidopsis thaliana) plants. Ectopic OCI expression in soybean enhanced shoot branching and leaf chlorophyll accumulation at later stages of vegetative development and enhanced seed protein contents and decreased the abundance of mRNAs encoding strigolactone synthesis enzymes. The OCI-expressing A. thaliana showed a slow-growth phenotype, with increased leaf numbers and enhanced shoot branching at flowering. The OCI-dependent inhibition of cysteine proteases enhanced drought tolerance in soybean and A. thaliana, photosynthetic CO2 assimilation being much less sensitive to drought-induced inhibition in the OCI-expressing soybean lines. Ectopic OCI expression or treatment with the cysteine protease inhibitor E64 increased lateral root densities in A. thaliana. E64 treatment also increased lateral root densities in the max2-1 mutants that are defective in strigolactone signalling, but not in the max3-9 mutants that are defective in strigolactone synthesis. Taken together, these data provide evidence that OCI-inhibited cysteine proteases participate in the control of growth and stress tolerance through effects on strigolactones. We conclude that cysteine proteases are important targets for manipulation of plant growth, development and stress tolerance, and also seed quality traits. |
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2016-06-01 |
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1467-7644 |
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CropM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
4740 |
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