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Author (up) Malone, R.W.; Kersebaum, K.C.; Kaspar, T.C.; Ma, L.; Jaynes, D.B.; Gillette, K. doi  openurl
  Title Winter rye as a cover crop reduces nitrate loss to subsurface drainage as simulated by HERMES Type Journal Article
  Year 2017 Publication Agricultural Water Management Abbreviated Journal Agric. Water Manage.  
  Volume 184 Issue Pages 156-169  
  Keywords Subsurface drainage, Cover crop, Nitrate loss, Modeling, Denitrification; NITROGEN DYNAMICS; TILE DRAINAGE; AGROECOSYSTEM MODELS; MISSISSIPPI; RIVER; GROWTH-MODEL; RZWQM-DSSAT; DRAINMOD-N; CATCH CROP; SOIL; WATER  
  Abstract HERMES is a widely used agricultural system model; however, it has never been tested for simulating N loss to subsurface drainage. Here, we integrated a simple drain flbw component into HERMES. We then compared the predictions to four years of data (2002-2005) from central Iowa fields in corn-oybean with winter rye as a cover crop (CC) and without winter rye (NCC). We also compared the HERMES predictions to the more complex Root Zone Water Quality Model (RZWQM) predictions for the same dataset. The average annual observed and simulated N loss to drain flow were 43.8 and 44.4 kg N/ha (NCC) and 17.6 and 18.9 kg N/ha (CC). The slightly over predicted N loss for CC was because of over predicted nitrate concentration, which may be partly caused by slightly under predicted average annual rye shoot N (observed and simulated values were 47.8 and 46.0 kg N/ha). Also, recent research from the site suggests that the soil field capacity may be greater in CC while we used the same soil parameters for both treatments. A local sensitivity analysis suggests that increased field capacity affects HERMES simulations, which includes reduced drain flow nitrate concentrations, increased denitrification, and reduced drain flow volume. HERMES-simulated cumulative monthly drain flow and annual drain flow were reasonable compared to field data and HERMES performance was comparable to other published drainage model tests. Unlike the RZWQM simulations, however, the modified HERMES did riot accurately simulate the year to year variability in nitrate concentration difference between NCC and CC, possibly due in part to the lack of partial mixing and displacement of the soil solution. The results suggest that 1) the relatively simple model HERMES is a promising tool to estimate annual N loss to drain flow under corn-soybean rotations with winter rye as a cover crop and 2) soil field capacity is a critical parameter to investigate to more thoroughly understand and appropriately model denitrification and N losses to subsurface drainage. Published by Elsevier B.V.  
  Address 2017-04-28  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0378-3774 ISBN Medium Article  
  Area Expedition Conference  
  Notes CropM, ft_macsur Approved no  
  Call Number MA @ admin @ Serial 4946  
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Author (up) Mandryk, M.; Reidsma, P.; Kanellopoulos, A.; Groot, J.C.J.; van Ittersum, M.K. url  doi
openurl 
  Title The role of farmers’ objectives in current farm practices and adaptation preferences: a case study in Flevoland, the Netherlands Type Journal Article
  Year 2014 Publication Regional Environmental Change Abbreviated Journal Reg Environ Change  
  Volume 14 Issue 4 Pages 1463-1478  
  Keywords multi-criteria decision-making; multi-objective optimization; agriculture; arable farm; vegetable farms; climate-change; south uruguay; land-use; design; agriculture; model; management; options; systems  
  Abstract The diversity in farmers’ objectives and responses to external drivers is usually not considered in integrated assessment studies that investigate impacts and adaptation to climate and socio-economic change. Here, we present an approach to assess how farmers’ stated objectives relate to their currently implemented practices and to preferred adaptation options, and we discuss what this implies for assessments of future changes. We based our approach on a combination of multi-criteria decision-making methods. We consistently assessed the importance of farmers’ objectives and adaptation preferences from what farmers say (based on interviews), from what farmers actually do (by analysing current farm performance) and from what farmers want (through a selected alternative farm plan). Our study was performed for six arable farms in Flevoland, a province in the Netherlands. Based on interviews with farmers, we reduced the long list of possible objectives to the most important ones. The objectives we assessed included maximization of economic result and soil organic matter, and minimization of gross margin variance, working hours and nitrogen balance. In our sample, farmers’ stated preferences in objectives were often not fully reflected in realized farming practices. Adaptation preferences of farmers largely resembled their current performance, but generally involved a trend towards stated preferences. Our results suggest that in Flevoland, although farmers do have more objectives, in practical decision-making they focus on economic result maximization, while for strategic decision-making they account for objectives influencing long-term performance and indicators associated with sustainability, in this case soil organic matter.  
  Address 2016-10-31  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 1436-3798 1436-378x ISBN Medium Article  
  Area Expedition Conference  
  Notes CropM Approved no  
  Call Number MA @ admin @ Serial 4794  
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Author (up) Mansouri, M.; Destain, M.-F. url  doi
openurl 
  Title Predicting biomass and grain protein content using Bayesian methods Type Journal Article
  Year 2015 Publication Stochastic Environmental Research and Risk Assessment Abbreviated Journal Stoch. Environ. Res. Risk Assess.  
  Volume 29 Issue 4 Pages 1167-1177  
  Keywords crop model; particle filter; prediction; ensemble kalman filter; parameter-estimation; particle filters; decision-support; state estimation; model; nitrogen; navigation; tracking; systems  
  Abstract This paper deals with the problem of predicting biomass and grain protein content using improved particle filtering (IPF) based on minimizing the Kullback-Leibler divergence. The performances of IPF are compared with those of the conventional particle filtering (PF) in two comparative studies. In the first one, we apply IPF and PF at a simple dynamic crop model with the aim to predict a single state variable, namely the winter wheat biomass, and to estimate several model parameters. In the second study, the proposed IPF and the PF are applied to a complex crop model (AZODYN) to predict a winter-wheat quality criterion, namely the grain protein content. The results of both comparative studies reveal that the IPF method provides a better estimation accuracy than the PF method. The benefit of the IPF method lies in its ability to provide accuracy related advantages over the PF method since, unlike the PF which depends on the choice of the sampling distribution used to estimate the posterior distribution, the IPF yields an optimum choice of this sampling distribution, which also utilizes the observed data. The performance of the proposed method is evaluated in terms of estimation accuracy, root mean square error, mean absolute error and execution times.  
  Address  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 1436-3240 1436-3259 ISBN Medium Article  
  Area Expedition Conference  
  Notes CropM Approved no  
  Call Number MA @ admin @ Serial 4664  
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Author (up) Mansouri, M.; Dumont, B.; Destain, M.-F. url  doi
openurl 
  Title Modeling and prediction of nonlinear environmental system using Bayesian methods Type Journal Article
  Year 2013 Publication Computers and Electronics in Agriculture Abbreviated Journal Computers and Electronics in Agriculture  
  Volume 92 Issue Pages 16-31  
  Keywords state and parameter estimation; variational filter; particle filter; extended kalman filter; nonlinear environmental system; leaf area index and soil moisture model; extended kalman filter; state-space models; parameter-estimation; particle filters; navigation; tutorial; tracking  
  Abstract An environmental dynamic system is usually modeled as a nonlinear system described by a set of nonlinear ODEs. A central challenge in computational modeling of environmental systems is the determination of the model parameters. In these cases, estimating these variables or parameters from other easily obtained measurements can be extremely useful. This work addresses the problem of monitoring and modeling a leaf area index and soil moisture model (LSM) using state estimation. The performances of various conventional and state-of-the-art state estimation techniques are compared when they are utilized to achieve this objective. These techniques include the extended Kalman filter (EKF), particle filter (PF), and the more recently developed technique variational filter (VF). Specifically, two comparative studies are performed. In the first comparative study, the state variables (the leaf-area index LAI, the volumetric water content of the soil layer 1, HUR1 and the volumetric water content of the soil layer 2, HUR2) are estimated from noisy measurements of these variables, and the various estimation techniques are compared by computing the estimation root mean square error (RMSE) with respect to the noise-free data. In the second comparative study, the state variables as well as the model parameters are simultaneously estimated. In this case, in addition to comparing the performances of the various state estimation techniques, the effect of number of estimated model parameters on the accuracy and convergence of these techniques are also assessed. The results of both comparative studies show that the PF provides a higher accuracy than the EKF, which is due to the limited ability of the EKF to handle highly nonlinear processes. The results also show that the VF provides a significant improvement over the PF because, unlike the PF which depends on the choice of sampling distribution used to estimate the posterior distribution, the VF yields an optimum choice of the sampling distribution, which also accounts for the observed data. The results of the second comparative study show that, for all techniques, estimating more model parameters affects the estimation accuracy as well as the convergence of the estimated states and parameters. However, the VF can still provide both convergence as well as accuracy related advantages over other estimation methods. (C) 2013 Elsevier B.V. All rights reserved.  
  Address  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0168-1699 ISBN Medium Article  
  Area Expedition Conference  
  Notes CropM Approved no  
  Call Number MA @ admin @ Serial 4495  
Permanent link to this record
 

 
Author (up) McKersie, B. doi  openurl
  Title Planning for food security in a changing climate Type Journal Article
  Year 2015 Publication Journal of Experimental Botany Abbreviated Journal J. Experim. Bot.  
  Volume 66 Issue 12 Pages 3435-3450  
  Keywords Adaptation, Physiological; *Climate Change; Crops, Agricultural/growth & development; Droughts; *Food Supply; Zea mays/physiology; Climate change; DroughtGard; cropping systems; drought tolerance; genetic engineering; maize; marker-assisted selection; plant breeding  
  Abstract The Intergovernmental Panel on Climate Change and other international agencies have concluded that global crop production is at risk due to climate change, population growth, and changing food preferences. Society expects that the agricultural sciences will innovate solutions to these problems and provide food security for the foreseeable future. My thesis is that an integrated research plan merging agronomic and genetic approaches has the greatest probability of success. I present a template for a research plan based on the lessons we have learned from the Green Revolution and from the development of genetically engineered crops that may guide us to meet this expectation. The plan starts with a vision of how the crop management system could change, and I give a few examples of innovations that are very much in their infancy but have significant potential. The opportunities need to be conceptualized on a regional basis for each crop to provide a target for change. The plan gives an overview of how the tools of plant biotechnology can be used to create the genetic diversity needed to implement the envisioned changes in the crop management system, using the development of drought tolerance in maize (Zea mays L.) as an example that has led recently to the commercial release of new hybrids in the USA. The plan requires an interdisciplinary approach that integrates and coordinates research on plant biotechnology, genetics, physiology, breeding, agronomy, and cropping systems to be successful.  
  Address  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0022-0957 1460-2431 ISBN Medium Review  
  Area Expedition Conference  
  Notes CropM Approved no  
  Call Number MA @ admin @ Serial 4568  
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