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Lizaso, J.I.; Ruiz-Ramos, M.; Rodriguez, L.; Gabaldon-Leal, C.; Oliveira, J.A.; Lorite, I.J.; Rodriguez, A.; Maddonni, G.A.; Otegui, M.E. |
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Title |
Modeling the response of maize phenology, kernel set, and yield components to heat stress and heat shock with CSM-IXIM |
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Journal Article |
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Year |
2017 |
Publication |
Field Crops Research |
Abbreviated Journal |
Field Crops Research |
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Volume |
214 |
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Pages |
239-252 |
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Keywords |
Heat stress, Maize; CSM-IXIM; CSM-CERES-maize; Beta function; CERES-MAIZE; DEVELOPMENTAL PROCESSES; TEMPERATURE RESPONSES; CROSS-VALIDATION; GRAIN-SORGHUM; GROWTH; SIMULATION; PLANTS; SENESCENCE; NITROGEN |
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Abstract |
The available evidence suggests that the current increasing trend in global surface temperatures will continue during this century, which will be accompanied by a greater frequency of extreme events. The IPCC has projected that higher temperatures may outscore the known optimal and maximum temperatures for maize. The purpose of this study was to improve the ability of the maize model CSM-IXIM to simulate crop development, growth, and yield under hot conditions, especially with regards to the impact of above-optimal temperatures around anthesis. Field and greenhouse experiments that were performed over three years (2014-2016) using the same short-season hybrid, PR37N01 (FAO 300), provided the data for this work. Maize was sown at a target population density of 5 plants M-2 on two sowing dates in 2014 and 2015 and on one in 2016 at three locations in Spain (northern, central, and southern Spain) with a well-defined thermal gradient. The same hybrid was also sown in two greenhouse chambers with daytime target temperatures of approximately 25 and above 35 degrees C. During the nighttime, the temperature in both chambers was allowed to equilibrate with the outside temperature. The greenhouse treatments consisted of moving 18 plants at selected phenological stages (V4, V9, anthesis, lag phase, early grain filling) from the cool chamber to the hot chamber over a week and then returning the plants back to the cool chamber. An additional control treatment remained in the cool chamber all season, and in 2015 and 2016, one treatment remained permanently in the hot chamber. Two maize models in the Decision Support System for Agrotechnology Transfer (DSSAT) V4.6 were compared, namely CERES and IXIM. The HUM version included additional components that were previously developed to improve the crop N simulation and to incorporate the anthesis-silking interval (ASI). A new thermal time calculation, a heat stress index, the impact of pollen-sterilizing temperatures, and the explicit simulation of male and female flowering as affected by the daily heat conditions were added to IXIM. The phenology simulation in field experiments by IXIM improved substantially. The RMSE for silking and maturity in CERES were 7.9 and 13.7 days, decreasing in DCIM to 2.8 and 7.3 days, respectively. Similarly, the estimated kernel numbers, kernel weight, grain yield and final biomass were always closer to the measurements in HUM than in CERES. The worst simulations were for kernel weight, and for that reason, the differences in grain yield between the models were small (the RMSE in CERES was 1219 kg ha(-1) vs. 1082 kg ha(-1) in IXIM). The greenhouse results also supported the improved estimations of crop development by IXIM (RMSE of 2.6 days) relative to CERES (7.4 days). The impact of the heat treatments on grain yield was consistently overestimated by CERES, while HUM captured the general trend. The new HUM model improved the CERES simulations when elevated temperatures were included in the evaluation data. Additional model testing with measurements from a wider latitudinal range and relevant heat conditions are required. |
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2017-11-24 |
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0378-4290 |
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CropM, ft_macsur |
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MA @ admin @ |
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5180 |
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Lorite, I.J.; García-Vila, M.; Santos, C.; Ruiz-Ramos, M.; Fereres, E. |
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Title |
AquaData and AquaGIS: Two computer utilities for temporal and spatial simulations of water-limited yield with AquaCrop |
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Journal Article |
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Year |
2013 |
Publication |
Computers and Electronics in Agriculture |
Abbreviated Journal |
Computers and Electronics in Agriculture |
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96 |
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227-237 |
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Keywords |
software tool; aquacrop; crop simulation model; geographic information system; spatial aggregation; fao crop model; irrigation management; iberian peninsula; southern spain; climate models; impacts; program; europe; system |
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The crop simulation model AquaCrop, recently developed by FAO can be used for a wide range of purposes. However, in its present form, its use over large areas or for applications that require a large number of simulations runs (e.g., long-term analysis), is not practical without developing software to facilitate such applications. Two tools for managing the inputs and outputs of AquaCrop, named AquaData and AquaGIS, have been developed for this purpose and are presented here. Both software utilities have been programmed in Delphi v. 5 and in addition, AquaGIS requires the Geographic Information System (GIS) programming tool MapObjects. These utilities allow the efficient management of input and output files, along with a GIS module to develop spatial analysis and effect spatial visualization of the results, facilitating knowledge dissemination. A sample of application of the utilities is given here, as an AquaCrop simulation analysis of impact of climate change on wheat yield in Southern Spain, which requires extensive input data preparation and output processing. The use of AquaCrop without the two utilities would have required approximately 1000 h of work, while the utilization of AquaData and AquaGIS reduced that time by more than 99%. Furthermore, the use of GIS, made it possible to perform a spatial analysis of the results, thus providing a new option to extend the use of the AquaCrop model to scales requiring spatial and temporal analyses. (C) 2013 Elsevier B.V. All rights reserved. |
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0168-1699 |
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CropM |
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MA @ admin @ |
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4609 |
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Author |
Ma, S.; Lardy, R.; Graux, A.-I.; Ben Touhami, H.; Klumpp, K.; Martin, R.; Bellocchi, G. |
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Regional-scale analysis of carbon and water cycles on managed grassland systems |
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Journal Article |
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Year |
2015 |
Publication |
Environmental Modelling & Software |
Abbreviated Journal |
Env. Model. Softw. |
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72 |
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356-371 |
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Keywords |
carbon flux; eddy flux measurements; model evaluation; pasture simulation model (pasim); water balance; pasture simulation-model; nitrous-oxide emissions; primary productivity npp; comparing global-models; net ecosystem exchange; greenhouse-gas balance; climate-change; agricultural systems; co2 exchange; european grasslands |
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Predicting regional and global carbon (C) and water dynamics on grasslands has become of major interest, as grasslands are one of the most widespread vegetation types worldwide, providing a number of ecosystem services (such as forage production and C storage). The present study is a contribution to a regional-scale analysis of the C and water cycles on managed grasslands. The mechanistic biogeochemical model PaSim (Pasture Simulation model) was evaluated at 12 grassland sites in Europe. A new parameterization was obtained on a common set of eco-physiological parameters, which represented an improvement of previous parameterization schemes (essentially obtained via calibration at specific sites). We found that C and water fluxes estimated with the parameter set are in good agreement with observations. The model with the new parameters estimated that European grassland are a sink of C with 213 g C m(-2) yr(-1), which is close to the observed net ecosystem exchange (NEE) flux of the studied sites (185 g C m(-2) yr(-1) on average). The estimated yearly average gross primary productivity (GPP) and ecosystem respiration (RECO) for all of the study sites are 1220 and 1006 g C m(-2) yr(-1), respectively, in agreement with observed average GPP (1230 g C m(-2) yr(-1)) and RECO (1046 g C m(-2) yr(-1)). For both variables aggregated on a weekly basis, the root mean square error (RMSE) was similar to 5-16 g C week(-1) across the study sites, while the goodness of fit (R-2) was similar to 0.4-0.9. For evapotranspiration (ET), the average value of simulated ET (415 mmyr(-1)) for all sites and years is close to the average value of the observed ET (451 mm yr(-1)) by flux towers (on a weekly basis, RMSE similar to 2-8 mm week(-1); R-2 = 0.3-0.9). However, further model development is needed to better represent soil water dynamics under dry conditions and soil temperature in winter. A quantification of the uncertainties introduced by spatially generalized parameter values in C and water exchange estimates is also necessary. In addition, some uncertainties in the input management data call for the need to improve the quality of the observational system. |
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2015-10-09 |
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1364-8152 |
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CropM, LiveM, ft_macsur |
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MA @ admin @ |
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4695 |
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Makowski, D.; Asseng, S.; Ewert, F.; Bassu, S.; Durand, J.L.; Li, T.; Martre, P.; Adam, M.; Aggarwal, P.K.; Angulo, C.; Baron, C.; Basso, B.; Bertuzzi, P.; Biernath, C.; Boogaard, H.; Boote, K.J.; Bouman, B.; Bregaglio, S.; Brisson, N.; Buis, S.; Cammarano, D.; Challinor, A.J.; Confalonieri, R.; Conijn, J.G.; Corbeels, M.; Deryng, D.; De Sanctis, G.; Doltra, J.; Fumoto, T.; Gaydon, D.; Gayler, S.; Goldberg, R.; Grant, R.F.; Grassini, P.; Hatfield, J.L.; Hasegawa, T.; Heng, L.; Hoek, S.; Hooker, J.; Hunt, L.A.; Ingwersen, J.; Izaurralde, R.C.; Jongschaap, R.E.E.; Jones, J.W.; Kemanian, R.A.; Kersebaum, K.C.; Kim, S.-H.; Lizaso, J.; Marcaida, M.; Müller, C.; Nakagawa, H.; Naresh Kumar, S.; Nendel, C.; O’Leary, G.J.; Olesen, J.E.; Oriol, P.; Osborne, T.M.; Palosuo, T.; Pravia, M.V.; Priesack, E.; Ripoche, D.; Rosenzweig, C.; Ruane, A.C.; Ruget, F.; Sau, F.; Semenov, M.A.; Shcherbak, I.; Singh, B.; Singh, U.; Soo, H.K.; Steduto, P.; Stöckle, C.; Stratonovitch, P.; Streck, T.; Supit, I.; Tang, L.; Tao, F.; Teixeira, E.I.; Thorburn, P.; Timlin, D.; Travasso, M.; Rötter, R.P.; Waha, K.; Wallach, D.; White, J.W.; Wilkens, P.; Williams, J.R.; Wolf, J.; Yin, X.; Yoshida, H.; Zhang, Z.; Zhu, Y. |
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Title |
A statistical analysis of three ensembles of crop model responses to temperature and CO2 concentration |
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Journal Article |
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Year |
2015 |
Publication |
Agricultural and Forest Meteorology |
Abbreviated Journal |
Agricultural and Forest Meteorology |
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214-215 |
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483-493 |
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Keywords |
climate change; crop model; emulator; meta-model; statistical model; yield; climate-change; wheat yields; metaanalysis; uncertainty; simulation; impacts |
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Ensembles of process-based crop models are increasingly used to simulate crop growth for scenarios of temperature and/or precipitation changes corresponding to different projections of atmospheric CO2 concentrations. This approach generates large datasets with thousands of simulated crop yield data. Such datasets potentially provide new information but it is difficult to summarize them in a useful way due to their structural complexities. An associated issue is that it is not straightforward to compare crops and to interpolate the results to alternative climate scenarios not initially included in the simulation protocols. Here we demonstrate that statistical models based on random-coefficient regressions are able to emulate ensembles of process-based crop models. An important advantage of the proposed statistical models is that they can interpolate between temperature levels and between CO2 concentration levels, and can thus be used to calculate temperature and [CO2] thresholds leading to yield loss or yield gain, without rerunning the original complex crop models. Our approach is illustrated with three yield datasets simulated by 19 maize models, 26 wheat models, and 13 rice models. Several statistical models are fitted to these datasets, and are then used to analyze the variability of the yield response to [CO2] and temperature. Based on our results, we show that, for wheat, a [CO2] increase is likely to outweigh the negative effect of a temperature increase of +2 degrees C in the considered sites. Compared to wheat, required levels of [CO2] increase are much higher for maize, and intermediate for rice. For all crops, uncertainties in simulating climate change impacts increase more with temperature than with elevated [CO2]. |
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0168-1923 |
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CropM, ft_macsur |
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MA @ admin @ |
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4714 |
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Author |
Martre, P.; He, J.; Le Gouis, J.; Semenov, M.A. |
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In silico system analysis of physiological traits determining grain yield and protein concentration for wheat as influenced by climate and crop management |
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Journal Article |
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2015 |
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Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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66 |
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12 |
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3581-3598 |
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Keywords |
Climate; *Computer Simulation; Crops, Agricultural/*growth & development/physiology; Edible Grain/*growth & development; Models, Biological; Nitrogen/metabolism; Plant Proteins/*metabolism; Plant Transpiration; Probability; *Quantitative Trait, Heritable; Soil/chemistry; Triticum/growth & development/metabolism/*physiology; Water/chemistry; Crop growth model; genetic adaptation; grain protein concentration; grain yield; interannual variability; sensitivity analysis; wheat (Triticum aestivum L.); yield stability |
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Genetic improvement of grain yield (GY) and grain protein concentration (GPC) is impeded by large genotype×environment×management interactions and by compensatory effects between traits. Here global uncertainty and sensitivity analyses of the process-based wheat model SiriusQuality2 were conducted with the aim of identifying candidate traits to increase GY and GPC. Three contrasted European sites were selected and simulations were performed using long-term weather data and two nitrogen (N) treatments in order to quantify the effect of parameter uncertainty on GY and GPC under variable environments. The overall influence of all 75 plant parameters of SiriusQuality2 was first analysed using the Morris method. Forty-one influential parameters were identified and their individual (first-order) and total effects on the model outputs were investigated using the extended Fourier amplitude sensitivity test. The overall effect of the parameters was dominated by their interactions with other parameters. Under high N supply, a few influential parameters with respect to GY were identified (e.g. radiation use efficiency, potential duration of grain filling, and phyllochron). However, under low N, >10 parameters showed similar effects on GY and GPC. All parameters had opposite effects on GY and GPC, but leaf and stem N storage capacity appeared as good candidate traits to change the intercept of the negative relationship between GY and GPC. This study provides a system analysis of traits determining GY and GPC under variable environments and delivers valuable information to prioritize model development and experimental work. |
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1460-2431 (Electronic) 0022-0957 (Linking) |
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CropM, ftnotmacsur |
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MA @ admin @ |
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4567 |
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