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Author Tao, F.; Roetter, R.P.; Palosuo, T.; Diaz-Ambrona, C.G.H.; Ines Minguez, M.; Semenov, M.A.; Kersebaum, K.C.; Nendel, C.; Cammarano, D.; Hoffmann, H.; Ewert, F.; Dambreville, A.; Martre, P.; Rodriguez, L.; Ruiz-Ramos, M.; Gaiser, T.; Hohn, J.G.; Salo, T.; Ferrise, R.; Bindi, M.; Schulman, A.H.
Title Designing future barley ideotypes using a crop model ensemble Type Journal Article
Year 2017 Publication European Journal of Agronomy Abbreviated Journal Europ. J. Agron.
Volume 82 Issue Pages 144-162
Keywords Water-Use Efficiency; Climate-Change; Nitrogen Dynamics; Systems; Simulation; Wheat Cultivars; Grain Weight; Yield; Growth; Fertilization; Adaptation; Adaptation; Breeding; Climate change; Crop simulation models; Impact; Genotype; Genetic traits
Abstract Climate change and its associated higher frequency and severity of adverse weather events require genotypic adaptation. Process-based ecophysiological modelling offers a powerful means to better target and accelerate development of new crop cultivars. Barley (Hordeum vulgare L) is an important crop throughout the world, and a good model for study of the genetics of stress adaptation because many quantitative trait loci and candidate genes for biotic and abiotic stress tolerance have been identified in it. Here, we developed a new approach to design future crop ideotypes using an ensemble of eight barley simulation models (i.e. APSIM, CropSyst, HERMES, MCWLA, MONICA, SIMPLACE, Sirius Quality, and WOFOST), and applied it to design climate-resilient barley ideotypes for Boreal and Mediterranean climatic zones in Europe. The results showed that specific barley genotypes, represented by sets of cultivar parameters in the crop models, could be promising under future climate change conditions, resulting in increased yields and low inter-annual yield variability. In contrast, other genotypes could result in substantial yield declines. The most favorable climate-zone-specific barley ideotypes were further proposed, having combinations of several key genetic traits in terms of phenology, leaf growth, photosynthesis, drought tolerance, and grain formation. For both Boreal and Mediterranean climatic zones, barley ideotypes under future climatic conditions should have a longer reproductive growing period, lower leaf senescence rate, larger radiation use efficiency or maximum assimilation rate, and higher drought tolerance. Such characteristics can produce substantial positive impacts on yields under contrasting conditions. Moreover, barley ideotypes should have a low photoperiod and high vernalization sensitivity for the Boreal climatic zone; for the Mediterranean, in contrast, it should have a low photoperiod and low vernalization sensitivity. The drought-tolerance trait is more beneficial for the Mediterranean than for the Boreal climatic zone. Our study demonstrates a sound approach to design future barley ideotypes based on an ensemble of well-tested, diverse crop models and on integration of knowledge from multiple disciplines. The robustness of model-aided ideotypes design can be further enhanced by continuously improving crop models and enhancing information exchange between modellers, agro-meteorologists, geneticists, physiologists, and plant breeders. (C) 2016 Elsevier B.V. All rights reserved.
Address 2017-01-20
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1161-0301 ISBN Medium Article
Area Expedition Conference
Notes (up) CropM, ft_MACSUR Approved no
Call Number MA @ admin @ Serial 4935
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Author Malone, R.W.; Kersebaum, K.C.; Kaspar, T.C.; Ma, L.; Jaynes, D.B.; Gillette, K.
Title Winter rye as a cover crop reduces nitrate loss to subsurface drainage as simulated by HERMES Type Journal Article
Year 2017 Publication Agricultural Water Management Abbreviated Journal Agric. Water Manage.
Volume 184 Issue Pages 156-169
Keywords Subsurface drainage, Cover crop, Nitrate loss, Modeling, Denitrification; NITROGEN DYNAMICS; TILE DRAINAGE; AGROECOSYSTEM MODELS; MISSISSIPPI; RIVER; GROWTH-MODEL; RZWQM-DSSAT; DRAINMOD-N; CATCH CROP; SOIL; WATER
Abstract HERMES is a widely used agricultural system model; however, it has never been tested for simulating N loss to subsurface drainage. Here, we integrated a simple drain flbw component into HERMES. We then compared the predictions to four years of data (2002-2005) from central Iowa fields in corn-oybean with winter rye as a cover crop (CC) and without winter rye (NCC). We also compared the HERMES predictions to the more complex Root Zone Water Quality Model (RZWQM) predictions for the same dataset. The average annual observed and simulated N loss to drain flow were 43.8 and 44.4 kg N/ha (NCC) and 17.6 and 18.9 kg N/ha (CC). The slightly over predicted N loss for CC was because of over predicted nitrate concentration, which may be partly caused by slightly under predicted average annual rye shoot N (observed and simulated values were 47.8 and 46.0 kg N/ha). Also, recent research from the site suggests that the soil field capacity may be greater in CC while we used the same soil parameters for both treatments. A local sensitivity analysis suggests that increased field capacity affects HERMES simulations, which includes reduced drain flow nitrate concentrations, increased denitrification, and reduced drain flow volume. HERMES-simulated cumulative monthly drain flow and annual drain flow were reasonable compared to field data and HERMES performance was comparable to other published drainage model tests. Unlike the RZWQM simulations, however, the modified HERMES did riot accurately simulate the year to year variability in nitrate concentration difference between NCC and CC, possibly due in part to the lack of partial mixing and displacement of the soil solution. The results suggest that 1) the relatively simple model HERMES is a promising tool to estimate annual N loss to drain flow under corn-soybean rotations with winter rye as a cover crop and 2) soil field capacity is a critical parameter to investigate to more thoroughly understand and appropriately model denitrification and N losses to subsurface drainage. Published by Elsevier B.V.
Address 2017-04-28
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0378-3774 ISBN Medium Article
Area Expedition Conference
Notes (up) CropM, ft_macsur Approved no
Call Number MA @ admin @ Serial 4946
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Author Tao, F.; Roetter, R.P.; Palosuo, T.; Hernandez Diaz-Ambrona, C.G.; Ines Minguez, M.; Semenov, M.A.; Kersebaum, K.C.; Nendel, C.; Specka, X.; Hoffmann, H.; Ewert, F.; Dambreville, A.; Martre, P.; Rodriguez, L.; Ruiz-Ramos, M.; Gaiser, T.; Hohn, J.G.; Salo, T.; Ferrise, R.; Bindi, M.; Cammarano, D.; Schulman, A.H.
Title Contribution of crop model structure, parameters and climate projections to uncertainty in climate change impact assessments Type Journal Article
Year 2018 Publication Global Change Biology Abbreviated Journal Glob. Chang. Biol.
Volume 24 Issue 3 Pages 1291-1307
Keywords barley; climate change; Europe; impact; super-ensemble; uncertainty; Nitrogen Dynamics; Multimodel Ensembles; Simulation-Models; Change; Scenarios; Yield; Rice; Weather; Growth; Wheat; Maize
Abstract Climate change impact assessments are plagued with uncertainties from many sources, such as climate projections or the inadequacies in structure and parameters of the impact model. Previous studies tried to account for the uncertainty from one or two of these. Here, we developed a triple-ensemble probabilistic assessment using seven crop models, multiple sets of model parameters and eight contrasting climate projections together to comprehensively account for uncertainties from these three important sources. We demonstrated the approach in assessing climate change impact on barley growth and yield at Jokioinen, Finland in the Boreal climatic zone and Lleida, Spain in the Mediterranean climatic zone, for the 2050s. We further quantified and compared the contribution of crop model structure, crop model parameters and climate projections to the total variance of ensemble output using Analysis of Variance (ANOVA). Based on the triple-ensemble probabilistic assessment, the median of simulated yield change was -4% and +16%, and the probability of decreasing yield was 63% and 31% in the 2050s, at Jokioinen and Lleida, respectively, relative to 1981-2010. The contribution of crop model structure to the total variance of ensemble output was larger than that from downscaled climate projections and model parameters. The relative contribution of crop model parameters and downscaled climate projections to the total variance of ensemble output varied greatly among the seven crop models and between the two sites. The contribution of downscaled climate projections was on average larger than that of crop model parameters. This information on the uncertainty from different sources can be quite useful for model users to decide where to put the most effort when preparing or choosing models or parameters for impact analyses. We concluded that the triple-ensemble probabilistic approach that accounts for the uncertainties from multiple important sources provide more comprehensive information for quantifying uncertainties in climate change impact assessments as compared to the conventional approaches that are deterministic or only account for the uncertainties from one or two of the uncertainty sources.
Address 2018-03-08
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1354-1013 ISBN Medium
Area Expedition Conference
Notes (up) CropM, ft_macsur Approved no
Call Number MA @ admin @ Serial 5194
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Author Fan, F.; Henriksen, C.B.; Porter, J.
Title Long-term effects of conversion to organic farming on ecosystem services – a model simulation case study and on-farm case study in Denmark Type Journal Article
Year 2018 Publication Agroecology and Sustainable Food Systems Abbreviated Journal Agroecology and Sustainable Food Systems
Volume 42 Issue 5 Pages 504-529
Keywords Long-term; conversion; economic value; ecosystem services; organic farming; agricultural policytrade-offs; Greenhouse-Gas Emissions; Former Arable Soils; Daisy Model; Crop; Production; Conventional Agriculture; Straw Incorporation; Production; Systems; Nitrogen Dynamics; Climate-Change; Water-Balance
Abstract Organic agriculture aims to produce food while establishing an ecological balance to augment ecosystem services (ES) and has been rapidly expanding in the world since the 1980s. Recently, however, in several European countries, including Denmark, organic farmers have converted back to conventional farming. Hence, understanding how agricultural ES are affected by the number of years since conversion to organic farming is imperative for policy makers to guide future agricultural policy. In order to investigate the long-term effects of conversion to organic farming on ES we performed i) a model simulation case study by applying the Daisy model to simulate 14 different conversion scenarios for a Danish farm during a 65 year period with increasing number of years under organic farming, and ii) an on-farm case study in Denmark with one conventional farm, one organic farm under conversion, and three organic farms converted 10, 15 and 58 years ago, respectively. Both the model simulation case study and the on-farm case study showed that non-marketable ES values increased with increasing number of years under organic farming. Trade-offs between marketable and non-marketable ES were not evident, since also marketable ES values generally showed an increasing trend, except when the price difference between organic and conventional products in the model simulation study was the smallest, and when an alfalfa pre-crop in the on-farm case study resulted in a significantly higher level of plant available nitrogen, which boosted the yield and the associated marketable ES of the subsequent winter rye crop. These results indicate a possible benefit of preserving long-term organic farms and could be used to argue for agricultural policy interventions to offset further reduction in the number of organic farms or the land area under organic farming.
Address 2018-05-03
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 2168-3565 ISBN Medium
Area Expedition Conference
Notes (up) CropM, ft_macsur Approved no
Call Number MA @ admin @ Serial 5198
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Author Webber, H.; Ewert, F.; Olesen, J.E.; Müller, C.; Fronzek, S.; Ruane, A.C.; Bourgault, M.; Martre, P.; Ababaei, B.; Bindi, M.; Ferrise, R.; Finger, R.; Fodor, N.; Gabaldón-Leal, C.; Gaiser, T.; Jabloun, M.; Kersebaum, K.-C.; Lizaso, J.I.; Lorite, I.J.; Manceau, L.; Moriondo, M.; Nendel, C.; Rodríguez, A.; Ruiz-Ramos, M.; Semenov, M.A.; Siebert, S.; Stella, T.; Stratonovitch, P.; Trombi, G.; Wallach, D.
Title Diverging importance of drought stress for maize and winter wheat in Europe Type Journal Article
Year 2018 Publication Nature Communications Abbreviated Journal Nat. Comm.
Volume 9 Issue Pages 4249
Keywords Climate-Change Impacts; Air CO2 Enrichment; Food Security; Heat-Stress; Nitrogen Dynamics; Semiarid Environments; Canopy Temperature; Simulation-Model; Crop Production; Elevated CO2
Abstract Understanding the drivers of yield levels under climate change is required to support adaptation planning and respond to changing production risks. This study uses an ensemble of crop models applied on a spatial grid to quantify the contributions of various climatic drivers to past yield variability in grain maize and winter wheat of European cropping systems (1984-2009) and drivers of climate change impacts to 2050. Results reveal that for the current genotypes and mix of irrigated and rainfed production, climate change would lead to yield losses for grain maize and gains for winter wheat. Across Europe, on average heat stress does not increase for either crop in rainfed systems, while drought stress intensifies for maize only. In low-yielding years, drought stress persists as the main driver of losses for both crops, with elevated CO2 offering no yield benefit in these years.
Address 2018-10-25
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 2041-1723 ISBN Medium
Area Expedition Conference
Notes (up) CropM, ft_macsur Approved no
Call Number MA @ admin @ Serial 5211
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