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Yin, X.; Kersebaum, K.-C.; Beaudoin, N.; Constantin, J.; Chen, F.; Louarn, G.; Manevski, K.; Hoffmann, M.; Kollas, C.; Armas-Herrera, C.M.; Baby, S.; Bindi, M.; Dibari, C.; Ferchaud, F.; Ferrise, R.; de Cortazar-Atauri, I.G.; Launay, M.; Mary, B.; Moriondo, M.; Öztürk, I.; Ruget, F.; Sharif, B.; Wachter-Ripoche, D.; Olesen, J.E. |
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Title |
Uncertainties in simulating N uptake, net N mineralization, soil mineral N and N leaching in European crop rotations using process-based models |
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Journal Article |
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Year |
2020 |
Publication |
Field Crops Research |
Abbreviated Journal |
Field Crops Research |
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Pages |
107863 |
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Keywords |
multi-model ensemble; crop rotations; catch crops; N cycling; N export |
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Modelling N transformations within cropping systems is crucial for N management optimization in order to increase N use efficiency and reduce N losses. Such modelling remains challenging because of the complexity of N cycling in soil–plant systems. In the current study, the uncertainties of six widely used process-based models (PBMs), including APSIM, CROPSYST, DAISY, FASSET, HERMES and STICS, were tested in simulating different N managements (catch crops (CC) and different N fertilizer rates) in 12-year rotations in Western Europe. Winter wheat, sugar beet and pea were the main crops, and radish was the main CC in the tested systems. Our results showed that PBMs simulated yield, aboveground biomass, N export and N uptake well with low RMSE values, except for sugar beet, which was generally less well parameterized. Moreover, PBMs provided more accurate crop simulations (i.e. N export and N uptake) compared to simulations of soil (N mineralization and soil mineral N (SMN)) and environmental variables (N leaching). The use of multi-model ensemble mean or median of four PBMs significantly reduced the mean absolute percentage error (MAPE) between simulations and observations to less than 15% for yield, aboveground biomass, N export and N uptake. Multi-model ensemble also significantly reduced the MAPE for net N mineralization and annual N leaching to around 15%, while it was larger than 20% for SMN. Generally, PBMs well simulated the CC effects on N fluxes, i.e. increasing N mineralization and reducing N leaching in both short-term and long-term, and all PBMs correctly predicted the effects of the reduced N rate on all measured variables in the study. The uncertainties of multi-model ensemble for N mineralization, SMN and N leaching were larger, mainly because these variables are influenced by plant-soil interactions and subject to cumulative long-term effects in crop rotations, which makes them more difficult to simulate. Large differences existed between individual PBMs due to the differences in formalisms for describing N processes in soil–plant systems, the skills of modelers and the model calibration level. In addition, the model performance also depended on the simulated variables, for instance, HERMES and FASSET performed better for yield and crop biomass, APSIM, DAISY and STICS performed better for N export and N uptake, STICS provided best simulation for SMN and N leaching among the six individual PBMs in the study, but all PBMs met difficulties to well predict either average or variance of soil N mineralization. Our results showed that better calibration for soil N variables is needed to improve model predictions of N cycling in order to optimize N management in crop rotations. |
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0378-4290 |
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CropM |
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CropM, ft_macsur |
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MA @ admin @ |
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5235 |
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Wallach, D.; Nissanka, S.P.; Karunaratne, A.S.; Weerakoon, W.M.W.; Thorburn, P.J.; Boote, K.J.; Jones, J.W. |
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Title |
Accounting for both parameter and model structure uncertainty in crop model predictions of phenology: A case study on rice |
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Journal Article |
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Year |
2016 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
European Journal of Agronomy |
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Uncertainty; Phenology; Parameter uncertainty; Multi-model ensemble; Generalized least squares; Rice; Crop model; APSIM; DSSAT |
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We consider predictions of the impact of climate warming on rice development times in Sri Lanka. The major emphasis is on the uncertainty of the predictions, and in particular on the estimation of mean squared error of prediction. Three contributions to mean squared error are considered. The first is parameter uncertainty that results from model calibration. To take proper account of the complex data structure, generalized least squares is used to estimate the parameters and the variance-covariance matrix of the parameter estimators. The second contribution is model structure uncertainty, which we estimate using two different models. An ANOVA analysis is used to separate the contributions of parameter and model uncertainty to mean squared error. The third contribution is model error, which is estimated using hindcasts. Mean squared error of prediction of time from emergence to maturity, for baseline +2 °C, is estimated as 108 days2, with model error contributing 86 days2, followed by model structure uncertainty which contributes 15 days2 and parameter uncertainty which contributes 7 days2. We also show how prediction uncertainty is reduced if prediction concerns development time averaged over years, or the difference in development time between baseline and warmer temperatures. |
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2016-09-13 |
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1161-0301 |
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CropM |
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CropM; wos; ftnotmacsur; wsnotyet; |
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MA @ admin @ |
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4777 |
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Sandor, R.; Ehrhardt, F.; Grace, P.; Recous, S.; Smith, P.; Snow, V.; Soussana, J.-F.; Basso, B.; Bhatia, A.; Brilli, L.; Doltra, J.; Dorich, C.D.; Doro, L.; Fitton, N.; Grant, B.; Harrison, M.T.; Kirschbaum, M.U.F.; Klumpp, K.; Laville, P.; Leonard, J.; Martin, R.; Massad, R.-S.; Moore, A.; Myrgiotis, V.; Pattey, E.; Rolinski, S.; Sharp, J.; Skiba, U.; Smith, W.; Wu, L.; Zhang, Q.; Bellocchi, G. |
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Title |
Ensemble modelling of carbon fluxes in grasslands and croplands |
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Journal Article |
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Year |
2020 |
Publication |
Field Crops Research |
Abbreviated Journal |
Field Crops Research |
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252 |
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107791 |
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Keywords |
C fluxes; croplands; grasslands; multi-model ensemble; multi-model; median (mmm); soil organic-carbon; greenhouse-gas emissions; climate-change impacts; crop model; data aggregation; use efficiency; n2o emissions; maize; yield; wheat; productivity |
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Croplands and grasslands are agricultural systems that contribute to land–atmosphere exchanges of carbon (C). We evaluated and compared gross primary production (GPP), ecosystem respiration (RECO), net ecosystem exchange (NEE) of CO2, and two derived outputs – C use efficiency (CUE=-NEE/GPP) and C emission intensity (IntC= -NEE/Offtake [grazed or harvested biomass]). The outputs came from 23 models (11 crop-specific, eight grassland-specific, and four models covering both systems) at three cropping sites over several rotations with spring and winter cereals, soybean and rapeseed in Canada, France and India, and two temperate permanent grasslands in France and the United Kingdom. The models were run independently over multi-year simulation periods in five stages (S), either blind with no calibration and initialization data (S1), using historical management and climate for initialization (S2), calibrated against plant data (S3), plant and soil data together (S4), or with the addition of C and N fluxes (S5). Here, we provide a framework to address methodological uncertainties and contextualize results. Most of the models overestimated or underestimated the C fluxes observed during the growing seasons (or the whole years for grasslands), with substantial differences between models. For each simulated variable, changes in the multi-model median (MMM) from S1 to S5 was used as a descriptor of the ensemble performance. Overall, the greatest improvements (MMM approaching the mean of observations) were achieved at S3 or higher calibration stages. For instance, grassland GPP MMM was equal to 1632 g C m−2 yr-1 (S5) while the observed mean was equal to 1763 m-2 yr-1 (average for two sites). Nash-Sutcliffe modelling efficiency coefficients indicated that MMM outperformed individual models in 92.3 % of cases. Our study suggests a cautious use of large-scale, multi-model ensembles to estimate C fluxes in agricultural sites if some site-specific plant and soil observations are available for model calibration. The further development of crop/grassland ensemble modelling will hinge upon the interpretation of results in light of the way models represent the processes underlying C fluxes in complex agricultural systems (grassland and crop rotations including fallow periods). |
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2020-06-08 |
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LiveM |
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MA @ admin @ |
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5230 |
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Sándor, R.; Barcza, Z.; Acutis, M.; Doro, L.; Hidy, D.; Köchy, M.; Minet, J.; Lellei-Kovács, E.; Ma, S.; Perego, A.; Rolinski, S.; Ruget, F.; Sanna, M.; Seddaiu, G.; Wu, L.; Bellocchi, G. |
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Multi-model simulation of soil temperature, soil water content and biomass in Euro-Mediterranean grasslands: Uncertainties and ensemble performance |
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Journal Article |
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Year |
2016 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
European Journal of Agronomy |
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Biomass; Grasslands; Modelling; Multi-model ensemble; Soil processes |
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• We simulate biomass, soil water content (SWC) and temperature (ST) in grasslands. • We compare nine models to the multi-model median (MMM) at nine sites. • With model calibration, we obtain satisfactory estimates of ST, less of SWC and biomass. • We observe discrepancies across models in the simulation of grassland processes. • We improve performance with multi-model approach. This study presents results from a major grassland model intercomparison exercise, and highlights the main challenges faced in the implementation of a multi-model ensemble prediction system in grasslands. Nine, independently developed simulation models linking climate, soil, vegetation and management to grassland biogeochemical cycles and production were compared in a simulation of soil water content (SWC) and soil temperature (ST) in the topsoil, and of biomass production. The results were assessed against SWC and ST data from five observational grassland sites representing a range of conditions – Grillenburg in Germany, Laqueuille in France with both extensive and intensive management, Monte Bondone in Italy and Oensingen in Switzerland – and against yield measurements from the same sites and other experimental grassland sites in Europe and Israel. We present a comparison of model estimates from individual models to the multi-model ensemble (represented by multi-model median: MMM). With calibration (seven out of nine models), the performances were acceptable for weekly-aggregated ST (R² > 0.7 with individual models and >0.8–0.9 with MMM), but less satisfactory with SWC (R² < 0.6 with individual models and < ∼ 0.5 with MMM) and biomass (R² < ∼0.3 with both individual models and MMM). With individual models, maximum biases of about −5 °C for ST, −0.3 m3 m−3 for SWC and 360 g DM m−2 for yield, as well as negative modelling efficiencies and some high relative root mean square errors indicate low model performance, especially for biomass. We also found substantial discrepancies across different models, indicating considerable uncertainties regarding the simulation of grassland processes. The multi-model approach allowed for improved performance, but further progress is strongly needed in the way models represent processes in managed grassland systems. |
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1161-0301 |
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LiveM |
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MA @ admin @ |
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4768 |
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Ruane, A.C.; Hudson, N.I.; Asseng, S.; Camarrano, D.; Ewert, F.; Martre, P.; Boote, K.J.; Thorburn, P.J.; Aggarwal, P.K.; Angulo, C.; Basso, B.; Bertuzzi, P.; Biernath, C.; Brisson, N.; Challinor, &rew J.; Doltra, J.; Gayler, S.; Goldberg, R.; Grant, R.F.; Heng, L.; Hooker, J.; Hunt, L.A.; Ingwersen, J.; Izaurralde, R.C.; Kersebaum, K.C.; Kumar, S.N.; Müller, C.; Nendel, C.; O’Leary, G.; Olesen, J.E.; Osborne, T.M.; Palosuo, T.; Priesack, E.; Ripoche, D.; Rötter, R.P.; Semenov, M.A.; Shcherbak, I.; Steduto, P.; Stöckle, C.O.; Stratonovitch, P.; Streck, T.; Supit, I.; Tao, F.; Travasso, M.; Waha, K.; Wallach, D.; White, J.W.; Wolf, J. |
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Multi-wheat-model ensemble responses to interannual climate variability |
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Journal Article |
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2016 |
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Environmental Modelling & Software |
Abbreviated Journal |
Env. Model. Softw. |
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81 |
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86-101 |
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Crop modeling; Uncertainty; Multi-model ensemble; Wheat; AgMIP; Climate; impacts; Temperature; Precipitation; lnterannual variability; simulation-model; crop model; nitrogen dynamics; winter-wheat; large-area; systems simulation; farming systems; yield response; growth; water |
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We compare 27 wheat models’ yield responses to interannual climate variability, analyzed at locations in Argentina, Australia, India, and The Netherlands as part of the Agricultural Model Intercomparison and Improvement Project (AgMIP) Wheat Pilot. Each model simulated 1981-2010 grain yield, and we evaluate results against the interannual variability of growing season temperature, precipitation, and solar radiation. The amount of information used for calibration has only a minor effect on most models’ climate response, and even small multi-model ensembles prove beneficial. Wheat model clusters reveal common characteristics of yield response to climate; however models rarely share the same cluster at all four sites indicating substantial independence. Only a weak relationship (R-2 <= 0.24) was found between the models’ sensitivities to interannual temperature variability and their response to long-term warming, suggesting that additional processes differentiate climate change impacts from observed climate variability analogs and motivating continuing analysis and model development efforts. Published by Elsevier Ltd. |
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English |
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1364-8152 |
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CropM, ft_macsur |
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MA @ admin @ |
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4769 |
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