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Author |
Dietrich, J.P.; Popp, A.; Lotze-Campen, H. |
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Title |
Reducing the loss of information and gaining accuracy with clustering methods in a global land-use model |
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Journal Article |
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Year |
2013 |
Publication  |
Ecological Modelling |
Abbreviated Journal |
Ecol. Model. |
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Volume |
263 |
Issue |
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Pages |
233-243 |
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Keywords |
aggregation; downscaling; clustering; information conservation; land use model; scale; scales; agriculture; simulation; dynamics; pattern |
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Abstract |
Global land-use models have to deal with processes on several spatial scales, ranging from the global scale down to the farm level. The increasing complexity of modern land-use models combined with the problem of limited computational resources represents a challenge to modelers. One solution of this problem is to perform spatial aggregation based on a regular grid or administrative units such as countries. Unfortunately this type of aggregation flattens many regional differences and produces a homogenized map of the world. In this paper we present an alternative aggregation approach using clustering methods. Clustering reduces the loss of information due to aggregation by choosing an appropriate aggregation pattern. We investigate different clustering methods, examining their quality in terms of information conservation. Our results indicate that clustering is always a good choice and preferable compared to grid-based aggregation. Although all the clustering methods we tested delivered a higher degree of information conservation than grid-based aggregation, the choice of clustering method is not arbitrary. Comparing outputs of a model fed with original data and a model fed with aggregated data, bottom-up clustering delivered the best results for the whole range of numbers of clusters tested. (C) 2013 Elsevier B.V. All rights reserved. |
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0304-3800 |
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TradeM |
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MA @ admin @ |
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4488 |
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Author |
Jing, Q.; Bélanger, G.; Baron, V.; Bonesmo, H.; Virkajärvi, P.; Young, D. |
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Title |
Regrowth simulation of the perennial grass timothy |
Type |
Journal Article |
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Year |
2012 |
Publication |
Ecological Modelling |
Abbreviated Journal |
Ecol. Model. |
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Volume |
232 |
Issue |
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Pages |
64-77 |
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Keywords |
biomass; carbohydrate; leaf area index; n uptake; reserve-dependent growth; temperature; nutritive-value; carbohydrate reserves; phleum-pratense; catimo model; leaf-area; nitrogen-fertilization; spring harvest; meadow fescue; tall fescue; growth |
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Abstract |
Several process-based models for simulating the growth of perennial grasses have been developed but few include the simulation of regrowth. The model CATIMO simulates the primary growth of timothy (Phleum pratense L), an important perennial forage grass species in northern regions of Europe and North America. Our objective was to further develop the model CATIMO to simulate timothy regrowth using the concept of reserve-dependent growth. The performance of this modified CATIMO model in simulating leaf area index (LAI), biomass dry matter (DM) yield, and N uptake of regrowth was assessed with data from four independent field experiments in Norway, Finland, and western and eastern Canada using an approach that combines graphical comparison and statistical analysis. Biomass DM yield and N uptake of regrowth were predicted at the same accuracy as primary growth with linear regression coefficients of determination between measured and simulated values greater than 0.79, model simulation efficiencies greater than 0.78, and normalized root mean square errors (14-30% for biomass and 24-34% for N uptake) comparable with the coefficients of variation of measured data (1-21% for biomass and 1-25% for N uptake). The model satisfactorily simulated the regrowth LAI but only up to a value of about 4.0. The modified CATIMO model with its capacity to simulate regrowth provides a framework to simulate perennial grasses with multiple harvests, and to explore management options for sustainable grass production under different environmental conditions. Crown Copyright (C) 2012 Published by Elsevier B.V. All rights reserved. |
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0304-3800 |
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CropM, LiveM |
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MA @ admin @ |
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4473 |
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Hidy, D.; Barcza, Z.; Haszpra, L.; Churkina, G.; Pintér, K.; Nagy, Z. |
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Title |
Development of the Biome-BGC model for simulation of managed herbaceous ecosystems |
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Journal Article |
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Year |
2012 |
Publication |
Ecological Modelling |
Abbreviated Journal |
Ecol. Model. |
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Volume |
226 |
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99-119 |
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Keywords |
biogeochemical model; biome-bgc; grassland; management; soil moisture; bayesian calibration; carbon flux model; regional applications; bayesian calibration; use efficiency; general-model; exchange; balance; climate; grassland; variability |
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Apart from measurements, numerical models are the most convenient instruments to analyze the carbon and water balance of terrestrial ecosystems and their interactions with changing environmental conditions. The process-based Biome-BGC model is widely used to simulate the storage and flux of water, carbon, and nitrogen within the vegetation, litter, and soil of unmanaged terrestrial ecosystems. Considering herbaceous vegetation related simulations with Biome-BGC, soil moisture and growing season control on ecosystem functioning is inaccurate due to the simple soil hydrology and plant phenology representation within the model. Consequently, Biome-BGC has limited applicability in herbaceous ecosystems because (1) they are usually managed; (2) they are sensitive to soil processes, most of all hydrology; and (3) their carbon balance is closely connected with the growing season length. Our aim was to improve the applicability of Biome-BGC for managed herbaceous ecosystems by implementing several new modules, including management. A new index (heatsum growing season index) was defined to accurately estimate the first and the final days of the growing season. Instead of a simple bucket soil sub-model, a multilayer soil sub-model was implemented, which can handle the processes of runoff, diffusion and percolation. A new module was implemented to simulate the ecophysiological effect of drought stress on plant mortality. Mowing and grazing modules were integrated in order to quantify the functioning of managed ecosystems. After modifications, the Biome-BGC model was calibrated and validated using eddy covariance-based measurement data collected in Hungarian managed grassland ecosystems. Model calibration was performed based on the Bayes theorem. As a result of these developments and calibration, the performance of the model was substantially improved. Comparison with measurement-based estimate showed that the start and the end of the growing season are now predicted with an average accuracy of 5 and 4 days instead of 46 and 85 days as in the original model. Regarding the different sites and modeled fluxes (gross primary production, total ecosystem respiration, evapotranspiration), relative errors were between 18-60% using the original model and 10-18% using the developed model; squares of the correlation coefficients were between 0.02-0.49 using the original model and 0.50-0.81 using the developed model. (c) 2011 Elsevier B.V. All rights reserved. |
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0304-3800 |
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LiveM |
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MA @ admin @ |
Serial |
4472 |
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Author |
Kim, Y.; Berger, S.; Kettering, J.; Tenhunen, J.; Haas, E.; Kiese, R. |
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Title |
Simulation of N2O emissions and nitrate leaching from plastic mulch radish cultivation with LandscapeDNDC |
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Journal Article |
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Year |
2014 |
Publication |
Ecological Research |
Abbreviated Journal |
Ecol. Res. |
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29 |
Issue |
3 |
Pages |
441-454 |
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Keywords |
biogeochemical modeling; landscapedndc; N2O; nitrate leaching; plastic mulch; nitrous-oxide emissions; semiarid loess plateau; biogeochemical model; soil-erosion; no emissions; forest soils; dndc model; film mulch; china; field |
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Radish is one of the major dry field crops in Asia commonly grown with plastic mulch and high rates of N fertilization, and potentially harming the environment due to N2O emissions and nitrate leaching. Despite the widespread use of plastic mulch, biogeochemical models so far do not yet consider impacts of mulch on soil environmental conditions and biogeochemistry. In this study, we adapted and successfully tested the LandscapeDNDC model against field data by simulating crop growth, C and N turnover and associated N2O emissions as well as nitrate leaching for radish cultivation with plastic mulch and in conjunction with different rates of N fertilization (465-765 kg N ha(-1) year(-1)). Due to the sandy soil texture and monsoon climate, nitrate leaching with rates up to 350 kg N ha(-1) year(-1) was the dominant reason for overall low nitrogen use efficiency (32-43 %). Direct or indirect N2O emissions (calculated from simulated nitrate leaching rates and IPCC EFind = 0.0075) ranged between 2 and 3 kg N ha(-1) year(-1), thus contributing an equal amount to total field emissions of about 5 kg N ha(-1) year(-1). Based on our results, emission factors for direct N2O emissions ranged between 0.004 and 0.005. These values are only half of the IPCC default value (0.01), demonstrating the need of biogeochemical models for developing site and/or region specific EFs. Simulation results also revealed that changes in agricultural management by applying the fertilizer only to the rows would be an efficient mitigation strategy, effectively decreasing field nitrate leaching and N2O emissions by 50-60 %. |
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0912-3814 1440-1703 |
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CropM, ft_macsur |
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MA @ admin @ |
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4528 |
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Author |
Rötter, R.P.; Höhn, J.; Trnka, M.; Fronzek, S.; Carter, T.R.; Kahiluoto, H. |
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Title |
Modelling shifts in agroclimate and crop cultivar response under climate change |
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Journal Article |
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Year |
2013 |
Publication |
Ecology and Evolution |
Abbreviated Journal |
Ecol. Evol. |
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Volume |
3 |
Issue |
12 |
Pages |
4197-4214 |
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Keywords |
Adaptation; agroclimatic indicator; barley; crop simulation model; cultivar response diversity |
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THIS PAPER AIMS: (i) to identify at national scale areas where crop yield formation is currently most prone to climate-induced stresses, (ii) to evaluate how the severity of these stresses is likely to develop in time and space, and (iii) to appraise and quantify the performance of two strategies for adapting crop cultivation to a wide range of (uncertain) climate change projections. To this end we made use of extensive climate, crop, and soil data, and of two modelling tools: N-AgriCLIM and the WOFOST crop simulation model. N-AgriCLIM was developed for the automatic generation of indicators describing basic agroclimatic conditions and was applied over the whole of Finland. WOFOST was used to simulate detailed crop responses at four representative locations. N-AgriCLIM calculations have been performed nationally for 3829 grid boxes at a 10 × 10 km resolution and for 32 climate scenarios. Ranges of projected shifts in indicator values for heat, drought and other crop-relevant stresses across the scenarios vary widely – so do the spatial patterns of change. Overall, under reference climate the most risk-prone areas for spring cereals are found in south-west Finland, shifting to south-east Finland towards the end of this century. Conditions for grass are likely to improve. WOFOST simulation results suggest that CO2 fertilization and adjusted sowing combined can lead to small yield increases of current barley cultivars under most climate scenarios on favourable soils, but not under extreme climate scenarios and poor soils. This information can be valuable for appraising alternative adaptation strategies. It facilitates the identification of regions in which climatic changes might be rapid or otherwise notable for crop production, requiring a more detailed evaluation of adaptation measures. The results also suggest that utilizing the diversity of cultivar responses seems beneficial given the high uncertainty in climate change projections. |
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2045-7758 |
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CropM, ft_macsur |
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MA @ admin @ |
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4576 |
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