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Bannink, A.; van Lingen, H.J.; Ellis, J.L.; France, J.; Dijkstra, J. |
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Title |
The contribution of mathematical modeling to understanding dynamic aspects of rumen metabolism |
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Journal Article |
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Year |
2016 |
Publication |
Frontiers in Microbiology |
Abbreviated Journal |
Frontiers in Microbiology |
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Volume |
7 |
Issue |
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Pages |
1820 |
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Keywords |
lactating dairy-cows; milk urea concentration; fatty-acid production; ruminal fermentation; mechanistic model; holstein cows; beef-cattle; stoichiometric parameters; methane production; feeding frequency |
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Abstract |
All mechanistic rumen models cover the main drivers of variation in rumen function, which are feed intake, the differences between feedstuffs and feeds in their intrinsic rumen degradation characteristics, and fractional outflow rate of fluid and particulate matter. Dynamic modeling approaches are best suited to the prediction of more nuanced responses in rumen metabolism, and represent the dynamics of the interactions between substrates and micro-organisms and inter-microbial interactions. The concepts of dynamics are discussed for the case of rumen starch digestion as influenced by starch intake rate and frequency of feed intake, and for the case of fermentation of fiber in the large intestine. Adding representations of new functional classes of micro-organisms (i.e., with new characteristics from the perspective of whole rumen function) in rumen models only delivers new insights if complemented by the dynamics of their interactions with other functional classes. Rumen fermentation conditions have to be represented due to their profound impact on the dynamics of substrate degradation and microbial metabolism. Although the importance of rumen pH is generally acknowledged, more emphasis is needed on predicting its variation as well as variation in the processes that underlie rumen fluid dynamics. The rumen wall has an important role in adapting to rapid changes in the rumen environment, clearing of volatile fatty acids (VFA), and maintaining rumen pH within limits. Dynamics of rumen wall epithelia and their role in VFA absorption needs to be better represented in models that aim to predict rumen responses across nutritional or physiological states. For a detailed prediction of rumen N balance there is merit in a dynamic modeling approach compared to the static approaches adopted in current protein evaluation systems. Improvement is needed on previous attempts to predict rumen VFA profiles, and this should be pursued by introducing factors that relate more to microbial metabolism. For rumen model construction, data on rumen microbiomes are preferably coupled with knowledge consolidated in rumen models instead of relying on correlations with rather general aspects of treatment or animal. This helps to prevent the disregard of basic principles and underlying mechanisms of whole rumen function. |
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2017-01-06 |
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English |
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1664-302x |
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LiveM, ft_MACSUR |
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MA @ admin @ |
Serial |
4932 |
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Author |
Kraus, D.; Weller, S.; Klatt, S.; Haas, E.; Wassmann, R.; Kiese, R.; Butterbach-Bahl, K. |
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Title |
A new LandscapeDNDC biogeochemical module to predict CH4 and N2O emissions from lowland rice and upland cropping systems |
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Journal Article |
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Year |
2015 |
Publication |
Plant and Soil |
Abbreviated Journal |
Plant Soil |
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Volume |
386 |
Issue |
1-2 |
Pages |
125-149 |
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Keywords |
methane; nitrous oxide; paddy rice; maize; model; nitrous-oxide emissions; process-based model; methane transport capacity; process-oriented model; pnet-n-dndc; forest soils; paddy soils; sensitivity-analysis; residue management; organic-matter |
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Abstract |
Replacing paddy rice by upland systems such as maize cultivation is an on-going trend in SE Asia caused by increasing water scarcity and higher demand for meat. How such land management changes will feedback on soil C and N cycles and soil greenhouse gas emissions is not well understood at present. A new LandscapeDNDC biogeochemical module was developed that allows the effect of land management changes on soil C and N cycle to be simulated. The new module is applied in combination with further modules simulating microclimate and crop growth and evaluated against observations from field experiments. The model simulations agree well with observed dynamics of CH (4) emissions in paddy rice depending on changes in climatic conditions and agricultural management. Magnitude and peak emission periods of N (2) O from maize cultivation are simulated correctly, though there are still deficits in reproducing day-to-day dynamics. These shortcomings are most likely related to simulated soil hydrology and may only be resolved if LandscapeDNDC is coupled to more complex hydrological models. LandscapeDNDC allows for simulation of changing land management practices in SE Asia. The possibility to couple LandscapeDNDC to more complex hydrological models is a feature needed to better understand related effects on soil-atmosphere-hydrosphere interactions. |
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0032-079x |
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CropM, ft_macsur |
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MA @ admin @ |
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4530 |
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Sanz-Cobena, A.; Misselbrook, T.H.; Hernaiz, P.; Vallejo, A. |
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Title |
Impact of rainfall to the effectiveness of pig slurry shallow injection method for NH3 mitigation in a Mediterranean soil |
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Journal Article |
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Year |
2019 |
Publication |
Atmospheric Environment |
Abbreviated Journal |
Atm. Environ. |
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Volume |
216 |
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Pages |
116913 |
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Keywords |
ammonia; micrometeorological method; slurry incorporation; trade-offs; nitrous oxide; mediterranean agroecosystems; nitrous-oxide emissions; field-applied manure; organic fertilizers; ammonia emissions; methane emissions; N2O emissions; animal manures; management; losses; grassland |
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Ammonia emission from fertilized cropping systems is an important concern for stakeholders, particularly in regions with high livestock densities producing large amounts of manure. Application of pig slurries can result in very large losses of N through NH3 volatilization, thus decreasing the N use efficiency (NUE) of the applied manure. Shallow incorporation has been shown to significantly abate these losses. In this field study, we assessed the impact of contrasting weather conditions on the effectiveness of shallow injection to abate NH3 emissions from pig slurry application to a Mediterranean soil. As potential trade-offs of NH3 abatement, greenhouse gas emissions were also measured under conditions of high soil moisture. Compared with surface application of slurry, shallow injection effectively and significantly decreased NH3 losses independently of weather conditions, but reductions of NH3 emission were greater after heavy rainfall. In contrast, under these conditions, shallow injection triggered higher emissions of N2O and CH4. Our findings reinforce the idea that any single-pollutant abatement strategy needs to be designed and assessed in a regional context and considering potential trade-offs in the form of other pollutants. |
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2020-06-08 |
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LiveM, ft_macsur |
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MA @ admin @ |
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5234 |
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Author |
Walkiewicz, A.; Bulak, P.; Brzezinska, M.; Wnuk, E.; Bieganowski, A. |
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Title |
Methane oxidation in heavy metal contaminated Mollic Gleysol under oxic and hypoxic conditions |
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Journal Article |
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Year |
2016 |
Publication |
Environmental Pollution |
Abbreviated Journal |
Environ. Pollut. |
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Volume |
213 |
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403-411 |
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Keywords |
Soil; Methane oxidation; CH4; Heavy metals; Oxygen status; Dehydrogenase; activity; methanotrophic bacteria; dehydrogenase-activity; potential activity; forest soils; responses; landfill; community; ch4; co2; bioremediation |
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Abstract |
Soils are the largest terrestrial sink for methane (CH4). However, heavy metals may exert toxicity to soil microorganisms, including methanotrophic bacteria. We tested the effect of lead (Pb), zinc (Zn) and nickel (Ni) on CH4 oxidation (1% v/v) and dehydrogenase activity, an index of the activity of the total soil microbial community in Mollic Gleysol soil in oxic and hypoxic conditions (oxia and hypoxia, 20% and 10% v/v O2, respectively). Metals were added in doses corresponding to the amounts permitted of Pb, Zn, Ni in agricultural soils (60, 120, 35 mg kg(-1), respectively), and half and double of these doses. Relatively low metal contents and O2 status reflect the conditions of most agricultural soils of temperate regions. Methane consumption showed high tolerance to heavy metals. The effect of O2 status was stronger than that of metals. CH4 consumption was enhanced under hypoxia, where both the start and the completion of the control and contaminated treatment were faster than under oxic conditions. Dehydrogenase activity, showed higher sensitivity to the contamination (except for low Ni dose), with a stronger effect of heavy metals, than that of the O2 status. |
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English |
Summary Language |
Newsletter July 2016 |
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0269-7491 |
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CropM, ft_macsur |
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MA @ admin @ |
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4771 |
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