| Records |
| Author |
Van Oijen, M.; Höglind, M. |
| Title |
Toward a Bayesian procedure for using process-based models in plant breeding, with application to ideotype design |
Type |
Journal Article |
| Year |
2016 |
Publication |
Euphytica |
Abbreviated Journal |
Euphytica |
| Volume |
207 |
Issue |
3 |
Pages |
627-643 |
| Keywords |
BASGRA; cold tolerance; genotype-environment interaction; plant breeding; process-based modelling; yield stability; grassland productivity; timothy regrowth; climate-change; water-deficit; forest models; late blight; leaf-area; calibration; growth; tolerance |
| Abstract |
Process-based grassland models (PBMs) simulate growth and development of vegetation over time. The models tend to have a large number of parameters that represent properties of the plants. To simulate different cultivars of the same species, different parameter values are required. Parameter differences may be interpreted as genetic variation for plant traits. Despite this natural connection between PBMs and plant genetics, there are only few examples of successful use of PBMs in plant breeding. Here we present a new procedure by which PBMs can help design ideotypes, i.e. virtual cultivars that optimally combine properties of existing cultivars. Ideotypes constitute selection targets for breeding. The procedure consists of four steps: (1) Bayesian calibration of model parameters using data from cultivar trials, (2) Estimating genetic variation for parameters from the combination of cultivar-specific calibrated parameter distributions, (3) Identifying parameter combinations that meet breeding objectives, (4) Translating model results to practice, i.e. interpreting parameters in terms of practical selection criteria. We show an application of the procedure to timothy (Phleum pratense L.) as grown in different regions of Norway. |
| Address |
2016-10-31 |
| Corporate Author |
|
Thesis |
|
| Publisher |
|
Place of Publication |
|
Editor |
|
Language  |
English |
Summary Language |
|
Original Title |
|
| Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
| Series Volume |
|
Series Issue |
|
Edition |
|
| ISSN |
0014-2336 |
ISBN |
|
Medium |
Article |
| Area |
|
Expedition |
|
Conference |
|
| Notes |
CropM, ft_macsur |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4820 |
| Permanent link to this record |
| |
|
| |
| Author |
Daccache, A.; Ciurana, J.S.; Diaz, J.A.R.; Knox, J.W. |
| Title |
Water and energy footprint of irrigated agriculture in the Mediterranean region |
Type |
Journal Article |
| Year |
2014 |
Publication |
Environmental Research Letters |
Abbreviated Journal |
Environ. Res. Lett. |
| Volume |
9 |
Issue |
12 |
Pages |
124014 |
| Keywords |
food security; CO2 emissions; nexus; water productivity; water resources; climate-change; southern spain; management; impacts; deficit; grids |
| Abstract |
Irrigated agriculture constitutes the largest consumer of freshwater in the Mediterranean region and provides a major source of income and employment for rural livelihoods. However, increasing droughts and water scarcity have highlighted concerns regarding the environmental sustainability of agriculture in the region. An integrated assessment combining a gridded water balance model with a geodatabase and GIS has been developed and used to assess the water demand and energy footprint of irrigated production in the region. Modelled outputs were linked with crop yield and water resources data to estimate water (m(3) kg(-1)) and energy (CO2 kg(-1)) productivity and identify vulnerable areas or `hotspots’. For a selected key crops in the region, irrigation accounts for 61 km(3) yr(-1) of water abstraction and 1.78 Gt CO2 emissions yr-1, with most emissions from sunflower (73 kg CO2/t) and cotton (60 kg CO2/t) production. Wheat is a major strategic crop in the region and was estimated to have a water productivity of 1000 tMm(-3) and emissions of 31 kg CO2/t. Irrigation modernization would save around 8 km(3) of water but would correspondingly increase CO2 emissions by around +135\%. Shifting from rain-fed to irrigated production would increase irrigation demand to 166 km(3) yr(-1) (+137\%) whilst CO2 emissions would rise by +270\%. The study has major policy implications for understanding the water-energy-food nexus in the region and the trade-offs between strategies to save water, reduce CO2 emissions and/or intensify food production. |
| Address |
|
| Corporate Author |
|
Thesis |
|
| Publisher |
|
Place of Publication |
|
Editor |
|
| Language |
English |
Summary Language |
|
Original Title |
|
| Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
| Series Volume |
|
Series Issue |
|
Edition |
|
| ISSN |
1748-9326 |
ISBN |
|
Medium |
Article |
| Area |
|
Expedition |
|
Conference |
|
| Notes |
CropM, ft_macsur |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4747 |
| Permanent link to this record |
| |
|
| |
| Author |
Castañeda-Vera, A.; Leffelaar, P.A.; Álvaro-Fuentes, J.; Cantero-Martínez, C.; Mínguez, M.I. |
| Title |
Selecting crop models for decision making in wheat insurance |
Type |
Journal Article |
| Year |
2015 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
European Journal of Agronomy |
| Volume |
68 |
Issue |
|
Pages |
97-116 |
| Keywords |
aquacrop; ceres-wheat; cropsyst; wofost; model choice; rainfed semi-arid areas; radiation use efficiency; water deficit; use efficiency; management-practices; farming systems; field-capacity; soil; yield; evaporation; photosynthesis; transpiration; irrigation |
| Abstract |
In crop insurance, the accuracy with which the insurer quantifies the actual risk is highly dependent on the availability on actual yield data. Crop models might be valuable tools to generate data on expected yields for risk assessment when no historical records are available. However, selecting a crop model for a specific objective, location and implementation scale is a difficult task. A look inside the different crop and soil modules to understand how outputs are obtained might facilitate model choice. The objectives of this paper were (i) to assess the usefulness of crop models to be used within a crop insurance analysis and design and (ii) to select the most suitable crop model for drought risk assessment in semi-arid regions in Spain. For that purpose first, a pre-selection of crop models simulating wheat yield under rainfed growing conditions at the field scale was made, and second, four selected models (Aquacrop, CERES-Wheat, CropSyst and WOFOST) were compared in terms of modelling approaches, process descriptions and model outputs. Outputs of the four models for the simulation of winter wheat growth are comparable when water is not limiting, but differences are larger when simulating yields under rainfed conditions. These differences in rainfed yields are mainly related to the dissimilar simulated soil water availability and the assumed linkages with dry matter formation. We concluded that for the simulation of winter wheat growth at field scale in such semi-arid conditions, CERES-Wheat and CropSyst are preferred. WOFOST is a satisfactory compromise between data availability and complexity when detail data on soil is limited. Aquacrop integrates physiological processes in some representative parameters, thus diminishing the number of input parameters, what is seen as an advantage when observed data is scarce. However, the high sensitivity of this model to low water availability limits its use in the region considered. Contrary to the use of ensembles of crop models, we endorse that efforts be concentrated on selecting or rebuilding a model that includes approaches that better describe the agronomic conditions of the regions in which they will be applied. The use of such complex methodologies as crop models is associated with numerous sources of uncertainty, although these models are the best tools available to get insight in these complex agronomic systems. (C) 2015 Elsevier B.V. All rights reserved. |
| Address |
|
| Corporate Author |
|
Thesis |
|
| Publisher |
|
Place of Publication |
|
Editor |
|
| Language |
English |
Summary Language |
|
Original Title |
|
| Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
| Series Volume |
|
Series Issue |
|
Edition |
|
| ISSN |
1161-0301 |
ISBN |
|
Medium |
Article |
| Area |
|
Expedition |
|
Conference |
|
| Notes |
CropM |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4710 |
| Permanent link to this record |
| |
|
| |
| Author |
Özkan, Ş.; Hill, J.; Cullen, B. |
| Title |
Effect of climate variability on pasture-based dairy feeding systems in south-east Australia |
Type |
Journal Article |
| Year |
2014 |
Publication |
Animal Production Science |
Abbreviated Journal |
Animal Production Science |
| Volume |
55 |
Issue |
9 |
Pages |
1106-1116 |
| Keywords |
carry-forward surplus; conserved-hay; probability; winter deficit; grown forage consumption; new-zealand; nutritive characteristics; interannual variation; botanical composition; herbage accumulation; crop; systems; cows; management; profit |
| Abstract |
The Australian dairy industry relies primarily on pasture for its feed supply. However, the variability in climate affects plant growth, leading to uncertainty in dryland pasture supply. This paper models the impact of climate variability on pasture production and examines the potential of two pasture-based dairy feeding systems: (1) to experience winter deficits; (2) to carry forward the conserved pasture surpluses as silage for future use; and (3) to conserve pasture surpluses as hay. The two dairy feeding systems examined were a traditional perennial ryegrass-based feeding system (ryegrass max. – RM) and a system that incorporated double cropping into the perennial ryegrass pasture base (complementary forage – CF). The conditional probability of the RM and CF systems to generate pasture deficits in winter were 94% and 96%, respectively. Both systems could carry forward the surplus silage into the following lactation almost once in every 4-5 years with the RM system performing slightly better than the CF system. The proportions of the grain-based concentrates fed in the two systems were 25% and 27% for the RM and CF systems, respectively. This study suggests that double-cropping systems have the potential to provide high-quality feed to support the feed gaps when pasture is not available due to increased variability in climatic conditions. |
| Address |
2015-09-23 |
| Corporate Author |
|
Thesis |
|
| Publisher |
|
Place of Publication |
|
Editor |
|
| Language |
English |
Summary Language |
|
Original Title |
|
| Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
| Series Volume |
|
Series Issue |
|
Edition |
|
| ISSN |
1836-5787 |
ISBN |
|
Medium |
Article |
| Area |
|
Expedition |
|
Conference |
|
| Notes |
LiveM |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4689 |
| Permanent link to this record |
| |
|
| |
| Author |
Heinemann, A.B.; Barrios-Perez, C.; Ramirez-Villegas, J.; Arango-Londoño, D.; Bonilla-Findji, O.; Medeiros, J.C.; Jarvis, A. |
| Title |
Variation and impact of drought-stress patterns across upland rice target population of environments in Brazil |
Type |
Journal Article |
| Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
| Volume |
66 |
Issue |
12 |
Pages |
3625-3638 |
| Keywords |
Brazil; Climate; Computer Simulation; Crops, Agricultural/physiology; *Droughts; *Environment; Geography; Oryza/*physiology; Plant Transpiration; *Stress, Physiological; Water; Breeding; Oryza sativa; environment classification; modelling; water deficit. |
| Abstract |
The upland rice (UR) cropped area in Brazil has decreased in the last decade. Importantly, a portion of this decrease can be attributed to the current UR breeding programme strategy, according to which direct grain yield selection is targeted primarily to the most favourable areas. New strategies for more-efficient crop breeding under non-optimal conditions are needed for Brazil’s UR regions. Such strategies should include a classification of spatio-temporal yield variations in environmental groups, as well as a determination of prevalent drought types and their characteristics (duration, intensity, phenological timing, and physiological effects) within those environmental groups. This study used a process-based crop model to support the Brazilian UR breeding programme in their efforts to adopt a new strategy that accounts for the varying range of environments where UR is currently cultivated. Crop simulations based on a commonly grown cultivar (BRS Primavera) and statistical analyses of simulated yield suggested that the target population of environments can be divided into three groups of environments: a highly favorable environment (HFE, 19% of area), a favorable environment (FE, 44%), and least favourable environment (LFE, 37%). Stress-free conditions dominated the HFE group (69% likelihood) and reproductive stress dominated the LFE group (68% likelihood), whereas reproductive and terminal drought stress were found to be almost equally likely to occur in the FE group. For the best and worst environments, we propose specific adaptation focused on the representative stress, while for the FE, wide adaptation to drought is suggested. ‘Weighted selection’ is also a possible strategy for the FE and LFE environment groups. |
| Address |
|
| Corporate Author |
|
Thesis |
|
| Publisher |
|
Place of Publication |
|
Editor |
|
| Language |
English |
Summary Language |
|
Original Title |
|
| Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
| Series Volume |
|
Series Issue |
|
Edition |
|
| ISSN |
0022-0957 1460-2431 |
ISBN |
|
Medium |
Article |
| Area |
|
Expedition |
|
Conference |
|
| Notes |
CropM |
Approved |
no |
| Call Number |
MA @ admin @ |
Serial |
4560 |
| Permanent link to this record |
