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Dumont, B.; Vancutsem, F.; Seutin, B.; Bodson, B.; Destain, J.-P.; Destain, M.-F. |
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Title |
Simulation de la croissance du blé à l’aide de modèles écophysiologiques: Synthèse bibliographique des méthodes, potentialités et limitations |
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Journal Article |
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Year |
2012 |
Publication |
Biotechnologie, Agronomie, Société et Environnement |
Abbreviated Journal |
Biotechnologie, Agronomie, Société et Environnement |
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Volume |
163 |
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376-386 |
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Keywords |
crops; growth; soil; Triticum; wheats; calibration; optimization methods |
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Crop models describe the growth and development of a crop interacting with its surrounding agro-environmental conditions (soil, climate and the close conditions of the plant). However, the implementation of such models remains difficult because of the high number of explanatory variables and parameters. It often happens that important discrepancies appear between measured and simulated values. This article aims to highlight the different sources of uncertainty related to the use of crop models, as well as the actual methods that allow a compensation for or, at least, a consideration of these sources of error during analysis of the model results. This article presents a literature review, which firstly synthesises the general mathematical structure of crop models. The main criteria for evaluating crop models are then described. Finally, several methods used for improving models are given. Parameter estimation methods, including frequentist and Bayesian approaches, are presented and data assimilation methods are reviewed. |
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French |
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CropM, ftnotmacsur |
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MA @ admin @ |
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4584 |
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Pulina, A.; Lai, R.; Salis, L.; Seddaiu, G.; Roggero, P.P.; Bellocchi, G. |
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Title |
Modelling pasture production and soil temperature, water and carbon fluxes in Mediterranean grassland systems with the Pasture Simulation Model |
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Journal Article |
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Year |
2018 |
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Grass and Forage Science |
Abbreviated Journal |
Grass Forage Sci. |
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73 |
Issue |
2 |
Pages |
272-283 |
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Keywords |
grassland production; Mediterranean pastures; model calibration; PaSim; sheep grazing systems; soil respiration |
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Abstract |
Grasslands play important roles in agricultural production and provide a range of ecosystem services. Modelling can be a valuable adjunct to experimental research in order to improve the knowledge and assess the impact of management practices in grassland systems. In this study, the PaSim model was assessed for its ability to simulate plant biomass production, soil temperature, water content, and total and heterotrophic soil respiration in Mediterranean grasslands. The study site was the extensively managed sheep grazing system at the Berchidda‐Monti Observatory (Sardinia, Italy), from which two data sets were derived for model calibration and validation respectively. A new model parameterization was derived for Mediterranean conditions from a set of eco‐physiological parameters. With the exception of heterotrophic respiration (Rh), for which modelling efficiency (EF) values were negative, the model outputs were in agreement with observations (e.g., EF ranging from ~0.2 for total soil respiration to ~0.7 for soil temperature). These results support the effectiveness of PaSim to simulate C cycle components in Mediterranean grasslands. The study also highlights the need of further model development to provide better representation of the seasonal dynamics of Mediterranean annual species‐rich grasslands and associated peculiar Rh features, for which the modelling is only implicitly being undertaken by the current PaSim release. |
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LiveM, ft_macsur |
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MA @ admin @ |
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4973 |
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Van Oijen, M.; Höglind, M. |
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Toward a Bayesian procedure for using process-based models in plant breeding, with application to ideotype design |
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2016 |
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Euphytica |
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Euphytica |
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207 |
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3 |
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627-643 |
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BASGRA; cold tolerance; genotype-environment interaction; plant breeding; process-based modelling; yield stability; grassland productivity; timothy regrowth; climate-change; water-deficit; forest models; late blight; leaf-area; calibration; growth; tolerance |
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Process-based grassland models (PBMs) simulate growth and development of vegetation over time. The models tend to have a large number of parameters that represent properties of the plants. To simulate different cultivars of the same species, different parameter values are required. Parameter differences may be interpreted as genetic variation for plant traits. Despite this natural connection between PBMs and plant genetics, there are only few examples of successful use of PBMs in plant breeding. Here we present a new procedure by which PBMs can help design ideotypes, i.e. virtual cultivars that optimally combine properties of existing cultivars. Ideotypes constitute selection targets for breeding. The procedure consists of four steps: (1) Bayesian calibration of model parameters using data from cultivar trials, (2) Estimating genetic variation for parameters from the combination of cultivar-specific calibrated parameter distributions, (3) Identifying parameter combinations that meet breeding objectives, (4) Translating model results to practice, i.e. interpreting parameters in terms of practical selection criteria. We show an application of the procedure to timothy (Phleum pratense L.) as grown in different regions of Norway. |
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2016-10-31 |
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0014-2336 |
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CropM, ft_macsur |
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MA @ admin @ |
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4820 |
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Refsgaard, J.C.; Madsen, H.; Andréassian, V.; Arnbjerg-Nielsen, K.; Davidson, T.A.; Drews, M.; Hamilton, D.P.; Jeppesen, E.; Kjellström, E.; Olesen, J.E.; Sonnenborg, T.O.; Trolle, D.; Willems, P.; Christensen, J.H. |
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A framework for testing the ability of models to project climate change and its impacts |
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2014 |
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Climatic Change |
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Clim. Change |
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122 |
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1-2 |
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271-282 |
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simulation-models; shallow lakes; predictions; calibration; ensembles; terminology; uncertainty; temperature; adaptation; validation |
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Models used for climate change impact projections are typically not tested for simulation beyond current climate conditions. Since we have no data truly reflecting future conditions, a key challenge in this respect is to rigorously test models using proxies of future conditions. This paper presents a validation framework and guiding principles applicable across earth science disciplines for testing the capability of models to project future climate change and its impacts. Model test schemes comprising split-sample tests, differential split-sample tests and proxy site tests are discussed in relation to their application for projections by use of single models, ensemble modelling and space-time-substitution and in relation to use of different data from historical time series, paleo data and controlled experiments. We recommend that differential-split sample tests should be performed with best available proxy data in order to build further confidence in model projections. |
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0165-0009 1573-1480 |
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CropM |
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MA @ admin @ |
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4688 |
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Author |
Angulo, C.; Rötter, R.; Lock, R.; Enders, A.; Fronzek, S.; Ewert, F. |
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Title |
Implication of crop model calibration strategies for assessing regional impacts of climate change in Europe |
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Journal Article |
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2013 |
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Agricultural and Forest Meteorology |
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Agricultural and Forest Meteorology |
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170 |
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32-46 |
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regional crop modelling; calibration; impact assessment; yield variability; simulation; simulation-models; elevated CO2; integrated assessment; bayesian calibration; atmospheric CO2; growth simulation; use efficiency; spring wheat; winter-wheat; large-area |
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Process-based crop simulation models are increasingly used in regional climate change impact studies, but little is known about the implications of different calibration strategies on simulated yields. This study aims to assess the importance of region-specific calibration of five important field crops (winter wheat, winter barley, potato, sugar beet and maize) across 25 member countries of the European Union (EU25). We examine three calibration strategies and their implications on spatial and temporal yield variability in response to climate change: (i) calculation of phenology parameters only, (ii) consideration of both phenology calibration and a yield correction factor and (iii) calibration of phenology and selected growth processes. The analysis is conducted for 533 climate zones, considering 24 years of observed yield data (1983-2006). The best performing strategy is used to estimate the impacts of climate change, increasing CO2 concentration and technology development on yields for the five crops across EU25, using seven climate change scenarios for the period 2041-2064. Simulations and calibrations are performed with the crop model LINTUL2 combined with a calibration routine implemented in the modelling interface LINTUL-FAST. The results show that yield simulations improve if growth parameters are considered in the calibration for individual regions (strategy 3); e.g. RMSE values for simulated winter wheat yield are 2.36, 1.10 and 0.70 Mg ha(-1) for calibration strategies 1, 2 and 3, respectively. The calibration strategy did not only affect the model simulations under reference climate but also the extent of the simulated climate change impacts. Applying the calibrated model for impact assessment revealed that climatic change alone will reduce crop yields. Consideration of the effects of increasing CO2 concentration and technology development resulted in yield increases for all crops except maize (i.e. the negative effects of climate change were outbalanced by the positive effects of CO2 and technology change), with considerable differences between scenarios and regions. Our simulations also suggest some increase in yield variability due to climate change which, however, is less pronounced than the differences among scenarios which are particularly large when the effects of CO2 concentration and technology development are considered. Our results stress the need for region-specific calibration of crop models used for Europe-wide assessments. Limitations of the considered strategies are discussed. We recommend that future work should focus on obtaining more comprehensive, high quality data with a finer resolution allowing application of improved strategies for model calibration that better account for spatial differences and changes over time in the growth and development parameters used in crop models. (c) 2012 Elsevier B.V. All rights reserved. |
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0168-1923 |
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CropM |
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MA @ admin @ |
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4597 |
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