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Author |
De Swaef, T.; Bellocchi, G.; Aper, J.; Lootens, P.; Roldan-Ruiz, I. |
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Title |
Use of identifiability analysis in designing phenotyping experiments for modelling forage production and quality |
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Journal Article |
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Year |
2019 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
70 |
Issue |
9 |
Pages |
2587-2604 |
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Keywords |
Breeding; grassland modelling; identifiability analysis; perennial; ryegrass; phenotyping; sensitivity analysis; pasture simulation-model; practical identifiability; crop; water; parameters; systems; carbon; uncertainty; sensitivity; emissions |
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Abstract |
Agricultural systems models are complex and tend to be over-parameterized with respect to observational datasets. Practical identifiability analysis based on local sensitivity analysis has proved effective in investigating identifiable parameter sets in environmental models, but has not been applied to agricultural systems models. Here, we demonstrate that identifiability analysis improves experimental design to ensure independent parameter estimation for yield and quality outputs of a complex grassland model. The Pasture Simulation model (PaSim) was used to demonstrate the effectiveness of practical identifiability analysis in designing experiments and measurement protocols within phe-notyping experiments with perennial ryegrass. Virtual experiments were designed combining three factors: frequency of measurements, duration of the experiment. and location of trials. Our results demonstrate that (i) PaSim provides sufficient detail in terms of simulating biomass yield and quality of perennial ryegrass for use in breeding, (ii) typical breeding trials are insufficient to parameterize all influential parameters, (iii) the frequency of measurements is more important than the number of growing seasons to improve the identifiability of PaSim parameters, and (iv) identifiability analysis provides a sound approach for optimizing the design of multi-location trials. Practical identifiability analysis can play an important role in ensuring proper exploitation of phenotypic data and cost-effective multi-location experimental designs. Considering the growing importance of simulation models, this study supports the design of experiments and measurement protocols in the phenotyping networks that have recently been organized. |
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2020-02-14 |
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English |
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0022-0957 |
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LiveM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial  |
5231 |
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Author |
Holman, I.P.; Brown, C.; Carter, T.R.; Harrison, P.A.; Rounsevell, M. |
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Title |
Improving the representation of adaptation in climate change impact models |
Type |
Journal Article |
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Year |
2019 |
Publication |
Regional Environmental Change |
Abbreviated Journal |
Reg. Environ. Change |
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Volume |
19 |
Issue |
3 |
Pages |
711-721 |
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Keywords |
Adaptive capacity; Limits; Water; Land; Decision making; Integrated assessment; Land-Cover Change; Global Change; River-Basin; Integrated Assessment; Adaptive Capacity; Vulnerability; Variability; Precautionary; Agriculture; Management |
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Abstract |
Climate change adaptation is a complex human process, framed by uncertainties and constraints, which is difficult to capture in existing assessment models. Attempts to improve model representations are hampered by a shortage of systematic descriptions of adaptation processes and their relevance to models. This paper reviews the scientific literature to investigate conceptualisations and models of climate change adaptation, and the ways in which representation of adaptation in models can be improved. The review shows that real-world adaptive responses can be differentiated along a number of dimensions including intent or purpose, timescale, spatial scale, beneficiaries and providers, type of action, and sector. However, models of climate change consequences for land use and water management currently provide poor coverage of these dimensions, instead modelling adaptation in an artificial and subjective manner. While different modelling approaches do capture distinct aspects of the adaptive process, they have done so in relative isolation, without producing improved unified representations. Furthermore, adaptation is often assumed to be objective, effective and consistent through time, with only a minority of models taking account of the human decisions underpinning the choice of adaptation measures (14%), the triggers that motivate actions (38%) or the time-lags and constraints that may limit their uptake and effectiveness (14%). No models included adaptation to take advantage of beneficial opportunities of climate change. Based on these insights, transferable recommendations are made on directions for future model development that may enhance realism within models, while also advancing our understanding of the processes and effectiveness of adaptation to a changing climate. |
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2019-04-27 |
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ISSN |
1436-3798 |
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TradeM, ft_macsur |
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MA @ admin @ |
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5220 |
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Author |
Andreoli, V.; Cassardo, C.; Iacona, L.T.; Spanna, F. |
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Title |
Description and Preliminary Simulations with the Italian Vineyard Integrated Numerical Model for Estimating Physiological Values (IVINE) |
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Journal Article |
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Year |
2019 |
Publication |
Agronomy |
Abbreviated Journal |
Agronomy |
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Volume |
9 |
Issue |
2 |
Pages |
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Keywords |
viticulture; crop model; phenology; physiological processes; climate; micrometeorology; microclimate; climate change; water status; balance model; crop; phenology; growth; STICS; implementation; carbon; yield |
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Abstract |
The numerical crop growth model Italian Vineyard Integrated Numerical model for Estimating physiological values (IVINE) was developed in order to evaluate environmental forcing effects on vine growth. The IVINE model simulates vine growth processes with parameterizations, allowing the understanding of plant conditions at a vineyard scale. It requires a set of meteorology data and soil water status as boundary conditions. The primary model outputs are main phenological stages, leaf development, yield, and sugar concentration. The model requires setting some variety information depending on the cultivar: At present, IVINE is optimized for Vitis vinifera L. Nebbiolo, a variety grown mostly in the Piedmont region (northwestern Italy). In order to evaluate the model accuracy, IVINE was validated using experimental observations gathered in Piedmontese vineyards, showing performances similar or slightly better than those of other widely used crop models. The results of a sensitivity analysis performed to highlight the effects of the variations of air temperature and soil water potential input variables on IVINE outputs showed that most phenological stages anticipated with increasing temperatures, while berry sugar content saturated at about 25.5 °Bx. Long-term (60 years, in the period 1950–2009) simulations performed over a Piedmontese subregion showed statistically significant variations of most IVINE output variables, with larger time trend slopes referring to the most recent 30-year period (1980–2009), thus confirming that ongoing climate change started influencing Piedmontese vineyards in 1980. |
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2019-02-21 |
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ISSN |
2073-4395 |
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article |
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CropM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
5218 |
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Author |
Luo, K.; Tao, F.; Deng, X.; Moiwo, J.P. |
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Title |
Changes in potential evapotranspiration and surface runoff in 1981-2010 and the driving factors in Upper Heihe River Basin in Northwest China |
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Journal Article |
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Year |
2017 |
Publication |
Hydrological Processes |
Abbreviated Journal |
Hydrol. Process. |
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Volume |
31 |
Issue |
1 |
Pages |
90-103 |
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Keywords |
driving factor; potential evaporation; surface runoff; SWAT model; Upper Heihe River Basin; SWAT Hydrologic Model; Pan Evaporation; Vegetation Model; Climate-Change; Water; Trends; Precipitation; Uncertainty; Variability; Generation |
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Abstract |
Changes in potential evapotranspiration and surface runoff can have profound implications for hydrological processes in arid and semiarid regions. In this study, we investigated the response of hydrological processes to climate change in Upper Heihe River Basin in Northwest China for the period from 1981 to 2010. We used agronomic, climatic and hydrological data to drive the Soil and Water Assessment Tool model for changes in potential evapotranspiration (ET0) and surface runoff and the driving factors in the study area. The results showed that increasing autumn temperature increased snow melt, resulting in increased surface runoff, especially in September and October. The spatial distribution of annual runoff was different from that of seasonal runoff, with the highest runoff in Yeniugou River, followed by Babaohe River and then the tributaries in the northern of the basin. There was no evaporation paradox at annual and seasonal time scales, and annual ET0 was driven mainly by wind speed. ET0 was driven by relative humidity in spring, sunshine hour duration in autumn and both sunshine hour duration and relative humility in summer. Surface runoff was controlled by temperature in spring and winter and by precipitation in summer (flood season). Although surface runoff increased in autumn with increasing temperature, it depended on rainfall in September and on temperature in October and November. Copyright (C) 2016 John Wiley & Sons, Ltd. |
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Address |
2018-08-23 |
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English |
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ISSN |
0885-6087 |
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CropM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
5207 |
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Author |
Korhonen, P.; Palosuo, T.; Persson, T.; Höglind, M.; Jego, G.; Van Oijen, M.; Gustavsson, A.-M.; Belanger, G.; Virkajärvi, P. |
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Title |
Modelling grass yields in northern climates – a comparison of three growth models for timothy |
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Journal Article |
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Year |
2018 |
Publication |
Field Crops Research |
Abbreviated Journal |
Field Crops Research |
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Volume |
224 |
Issue |
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Pages |
37-47 |
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Keywords |
Forage grass; Model comparison; Timothy; Uncertainty; Yield; Nutritive-Value; Catimo Model; Nitrogen Balances; Simulation; Regrowth; Wheat; Stics; Dynamics; Harvest; Water |
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Abstract |
During the past few years, several studies have compared the performance of crop simulation models to assess the uncertainties in model-based climate change impact assessments and other modelling studies. Many of these studies have concentrated on cereal crops, while fewer model comparisons have been conducted for grasses. We compared the predictions for timothy grass (Phleum pratertse L.) yields for first and second cuts along with the dynamics of above-ground biomass for the grass simulation models BASGRA and CATIMO, and the soil -crop model STICS. The models were calibrated and evaluated using field data from seven sites across Northern Europe and Canada with different climates, soil conditions and management practices. Altogether the models were compared using data on timothy grass from 33 combinations of sites, cultivars and management regimes. Model performances with two calibration approaches, cultivar-specific and generic calibrations, were compared. All the models studied estimated the dynamics of above-ground biomass and the leaf area index satisfactorily, but tended to underestimate the first cut yield. Cultivar-specific calibration resulted in more accurate first cut yield predictions than the generic calibration achieving root mean square errors approximately one third lower for the cultivar-specific calibration. For the second cut, the difference between the calibration methods was small. The results indicate that detailed soil process descriptions improved the overall model performance and the model responses to management, such as nitrogen applications. The results also suggest that taking the genetic variability into account between cultivars of timothy grass also improves the yield estimates. Calibrations using both spring and summer growth data simultaneously revealed that processes determining the growth in these two periods require further attention in model development. |
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Address |
2018-07-12 |
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English |
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ISSN |
0378-4290 |
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CropM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
5206 |
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