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Author Wallach, D.; Nissanka, S.P.; Karunaratne, A.S.; Weerakoon, W.M.W.; Thorburn, P.J.; Boote, K.J.; Jones, J.W. url  doi
openurl 
  Title Accounting for both parameter and model structure uncertainty in crop model predictions of phenology: A case study on rice Type Journal Article
  Year 2016 Publication European Journal of Agronomy Abbreviated Journal European Journal of Agronomy  
  Volume (up) Issue Pages  
  Keywords Uncertainty; Phenology; Parameter uncertainty; Multi-model ensemble; Generalized least squares; Rice; Crop model; APSIM; DSSAT  
  Abstract We consider predictions of the impact of climate warming on rice development times in Sri Lanka. The major emphasis is on the uncertainty of the predictions, and in particular on the estimation of mean squared error of prediction. Three contributions to mean squared error are considered. The first is parameter uncertainty that results from model calibration. To take proper account of the complex data structure, generalized least squares is used to estimate the parameters and the variance-covariance matrix of the parameter estimators. The second contribution is model structure uncertainty, which we estimate using two different models. An ANOVA analysis is used to separate the contributions of parameter and model uncertainty to mean squared error. The third contribution is model error, which is estimated using hindcasts. Mean squared error of prediction of time from emergence to maturity, for baseline +2 °C, is estimated as 108 days2, with model error contributing 86 days2, followed by model structure uncertainty which contributes 15 days2 and parameter uncertainty which contributes 7 days2. We also show how prediction uncertainty is reduced if prediction concerns development time averaged over years, or the difference in development time between baseline and warmer temperatures.  
  Address 2016-09-13  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language Language Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 1161-0301 ISBN Medium Article  
  Area CropM Expedition Conference  
  Notes CropM; wos; ftnotmacsur; wsnotyet; Approved no  
  Call Number MA @ admin @ Serial 4777  
Permanent link to this record
 

 
Author Schauberger, B.; Rolinski, S.; Müller, C. doi  openurl
  Title A network-based approach for semi-quantitative knowledge mining and its application to yield variability Type Journal Article
  Year 2016 Publication Environmental Research Letters Abbreviated Journal Environ. Res. Lett.  
  Volume (up) 11 Issue 12 Pages 123001  
  Keywords yield variability; crop models; interaction network; plant process; wheat; maize; rice; Global Food Security; Climate-Change; Crop Production; Stress Tolerance; Wheat Yields; Heat-Stress; Temperature Variability; Environmental-Factors; United-States; Elevated CO2  
  Abstract Variability of crop yields is detrimental for food security. Under climate change its amplitude is likely to increase, thus it is essential to understand the underlying causes and mechanisms. Crop models are the primary tool to project future changes in crop yields under climate change. Asystematic overview of drivers and mechanisms of crop yield variability (YV) can thus inform crop model development and facilitate improved understanding of climate change impacts on crop yields. Yet there is a vast body of literature on crop physiology and YV, which makes a prioritization of mechanisms for implementation in models challenging. Therefore this paper takes on a novel approach to systematically mine and organize existing knowledge from the literature. The aim is to identify important mechanisms lacking in models, which can help to set priorities in model improvement. We structure knowledge from the literature in a semi-quantitative network. This network consists of complex interactions between growing conditions, plant physiology and crop yield. We utilize the resulting network structure to assign relative importance to causes of YV and related plant physiological processes. As expected, our findings confirm existing knowledge, in particular on the dominant role of temperature and precipitation, but also highlight other important drivers of YV. More importantly, our method allows for identifying the relevant physiological processes that transmit variability in growing conditions to variability in yield. We can identify explicit targets for the improvement of crop models. The network can additionally guide model development by outlining complex interactions between processes and by easily retrieving quantitative information for each of the 350 interactions. We show the validity of our network method as a structured, consistent and scalable dictionary of literature. The method can easily be applied to many other research fields.  
  Address 2017-04-07  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 1748-9326 ISBN Medium Review  
  Area Expedition Conference  
  Notes CropM, ft_macsur Approved no  
  Call Number MA @ admin @ Serial 4942  
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Author Sánchez, B.; Rasmussen, A.; Porter, J.R. doi  openurl
  Title Temperatures and the growth and development of maize and rice: a review Type Journal Article
  Year 2014 Publication Global Change Biology Abbreviated Journal Glob. Chang. Biol.  
  Volume (up) 20 Issue 2 Pages 408-417  
  Keywords Climate Change; Oryza/*growth & development; Temperature; Zea mays/*growth & development; cardinal temperatures; climatic change impacts; development; growth; lethal temperatures; maize; rice  
  Abstract Because of global land surface warming, extreme temperature events are expected to occur more often and more intensely, affecting the growth and development of the major cereal crops in several ways, thus affecting the production component of food security. In this study, we have identified rice and maize crop responses to temperature in different, but consistent, phenological phases and development stages. A literature review and data compilation of around 140 scientific articles have determined the key temperature thresholds and response to extreme temperature effects for rice and maize, complementing an earlier study on wheat. Lethal temperatures and cardinal temperatures, together with error estimates, have been identified for phenological phases and development stages. Following the methodology of previous work, we have collected and statistically analysed temperature thresholds of the three crops for the key physiological processes such as leaf initiation, shoot growth and root growth and for the most susceptible phenological phases such as sowing to emergence, anthesis and grain filling. Our summary shows that cardinal temperatures are conservative between studies and are seemingly well defined in all three crops. Anthesis and ripening are the most sensitive temperature stages in rice as well as in wheat and maize. We call for further experimental studies of the effects of transgressing threshold temperatures so such responses can be included into crop impact and adaptation models.  
  Address  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 1354-1013 ISBN Medium Article  
  Area Expedition Conference  
  Notes CropM, ftnotmacsur, IPCC-AR5 Approved no  
  Call Number MA @ admin @ Serial 4693  
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Author Lehtonen, H. openurl 
  Title Evaluating adaptation and the production development of Finnish agriculture in climate and global change Type Journal Article
  Year 2015 Publication Agricultural and Food Science Abbreviated Journal Agricultural and Food Science  
  Volume (up) 24 Issue 3 Pages 219-234  
  Keywords agricultural sector modelling; economic adjustment; global prices; climate change; finnish agriculture; crop production; land-use; challenge; ensembles; Finland; Europe; policy  
  Abstract Agricultural product prices and policies influence the development of crop yields under climate change through farm level management decisions. On this basis, five main scenarios were specified for agricultural commodity prices and crop yields. An economic agricultural sector model was used in order to assess the impacts of the scenarios on production, land use and farm income in Finland. The results suggest that falling crop yields, if realized due to low prices and restrictive policies, will result in decreasing crop and livestock production and increasing nutrient surplus. Slowly increasing crop yields could stabilise production and increase farm income. Significantly higher crop prices and yields are required, however, for any marked increase in production in Finland. Cereals production would increase relatively more than livestock production, if there were high prices for agricultural products. This is explained by abundant land resources, a high opportunity cost of labour and policies maintaining current dairy and beef production.  
  Address 2016-07-22  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 1459-6067 ISBN Medium Article  
  Area Expedition Conference  
  Notes TradeM, ft_macsur Approved no  
  Call Number MA @ admin @ Serial 4750  
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Author Tao, F.; Roetter, R.P.; Palosuo, T.; Hernandez Diaz-Ambrona, C.G.; Ines Minguez, M.; Semenov, M.A.; Kersebaum, K.C.; Nendel, C.; Specka, X.; Hoffmann, H.; Ewert, F.; Dambreville, A.; Martre, P.; Rodriguez, L.; Ruiz-Ramos, M.; Gaiser, T.; Hohn, J.G.; Salo, T.; Ferrise, R.; Bindi, M.; Cammarano, D.; Schulman, A.H. doi  openurl
  Title Contribution of crop model structure, parameters and climate projections to uncertainty in climate change impact assessments Type Journal Article
  Year 2018 Publication Global Change Biology Abbreviated Journal Glob. Chang. Biol.  
  Volume (up) 24 Issue 3 Pages 1291-1307  
  Keywords barley; climate change; Europe; impact; super-ensemble; uncertainty; Nitrogen Dynamics; Multimodel Ensembles; Simulation-Models; Change; Scenarios; Yield; Rice; Weather; Growth; Wheat; Maize  
  Abstract Climate change impact assessments are plagued with uncertainties from many sources, such as climate projections or the inadequacies in structure and parameters of the impact model. Previous studies tried to account for the uncertainty from one or two of these. Here, we developed a triple-ensemble probabilistic assessment using seven crop models, multiple sets of model parameters and eight contrasting climate projections together to comprehensively account for uncertainties from these three important sources. We demonstrated the approach in assessing climate change impact on barley growth and yield at Jokioinen, Finland in the Boreal climatic zone and Lleida, Spain in the Mediterranean climatic zone, for the 2050s. We further quantified and compared the contribution of crop model structure, crop model parameters and climate projections to the total variance of ensemble output using Analysis of Variance (ANOVA). Based on the triple-ensemble probabilistic assessment, the median of simulated yield change was -4% and +16%, and the probability of decreasing yield was 63% and 31% in the 2050s, at Jokioinen and Lleida, respectively, relative to 1981-2010. The contribution of crop model structure to the total variance of ensemble output was larger than that from downscaled climate projections and model parameters. The relative contribution of crop model parameters and downscaled climate projections to the total variance of ensemble output varied greatly among the seven crop models and between the two sites. The contribution of downscaled climate projections was on average larger than that of crop model parameters. This information on the uncertainty from different sources can be quite useful for model users to decide where to put the most effort when preparing or choosing models or parameters for impact analyses. We concluded that the triple-ensemble probabilistic approach that accounts for the uncertainties from multiple important sources provide more comprehensive information for quantifying uncertainties in climate change impact assessments as compared to the conventional approaches that are deterministic or only account for the uncertainties from one or two of the uncertainty sources.  
  Address 2018-03-08  
  Corporate Author Thesis  
  Publisher Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 1354-1013 ISBN Medium  
  Area Expedition Conference  
  Notes CropM, ft_macsur Approved no  
  Call Number MA @ admin @ Serial 5194  
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