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Author |
Van Oosten, M.J.; Sharkhuu, A.; Batelli, G.; Bressan, R.A.; Maggio, A. |
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Title |
The Arabidopsis thaliana mutant air1 implicates SOS3 in the regulation of anthocyanins under salt stress |
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Journal Article |
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Year |
2013 |
Publication |
Plant Molecular Biology |
Abbreviated Journal |
Plant Mol. Biol. |
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Volume |
83 |
Issue |
4-5 |
Pages |
405-415 |
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Keywords |
Anthocyanins/analysis/*metabolism; Arabidopsis/drug effects/*genetics/physiology/radiation effects; Arabidopsis Proteins/*genetics/metabolism; Basic-Leucine Zipper Transcription Factors/*genetics/metabolism; Flavonoids/metabolism; *Gene Expression Regulation, Plant; Light; Mutagenesis, Insertional; Phenotype; Plant Roots/drug effects/genetics/physiology/radiation effects; Plant Shoots/drug effects/genetics/physiology/radiation effects; Real-Time Polymerase Chain Reaction; Sodium Chloride/pharmacology; Stress, Physiological |
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Abstract |
The accumulation of anthocyanins in plants exposed to salt stress has been largely documented. However, the functional link and regulatory components underlying the biosynthesis of these molecules during exposure to stress are largely unknown. In a screen of second site suppressors of the salt overly sensitive3-1 (sos3-1) mutant, we isolated the anthocyanin-impaired-response-1 (air1) mutant. air1 is unable to accumulate anthocyanins under salt stress, a key phenotype of sos3-1 under high NaCl levels (120 mM). The air1 mutant showed a defect in anthocyanin production in response to salt stress but not to other stresses such as high light, low phosphorous, high temperature or drought stress. This specificity indicated that air1 mutation did not affect anthocyanin biosynthesis but rather its regulation in response to salt stress. Analysis of this mutant revealed a T-DNA insertion at the first exon of an Arabidopsis thaliana gene encoding for a basic region-leucine zipper transcription factor. air1 mutants displayed higher survival rates compared to wild-type in oxidative stress conditions, and presented an altered expression of anthocyanin biosynthetic genes such as F3H, F3’H and LDOX in salt stress conditions. The results presented here indicate that AIR1 is involved in the regulation of various steps of the flavonoid and anthocyanin accumulation pathways and is itself regulated by the salt-stress response signalling machinery. The discovery and characterization of AIR1 opens avenues to dissect the connections between abiotic stress and accumulation of antioxidants in the form of flavonoids and anthocyanins. |
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0167-4412 1573-5028 |
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CropM |
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MA @ admin @ |
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4616 |
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Author |
Shrestha, S.; Ciaian, P.; Himics, M.; van Doorslaer, B. |
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Title |
Impacts of climate change on EU agriculture |
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Journal Article |
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Year |
2013 |
Publication |
Review of Agricultural and Applied Economics |
Abbreviated Journal |
Review of Agricultural and Applied Economics |
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Volume |
16 |
Issue |
2 |
Pages |
24-39 |
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Keywords |
climate change; agricultural productivity; adaptation; Europe |
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The current paper investigates the medium term economic impact of climate changes on the EU agriculture. The yield change data under climate change scenarios are taken from the BIOMA (Biophysical Models Application) simulation environment. We employ CAPRI modelling framework to identify the EU aggregate economic effects as well as regional impacts. We take into account supply and market price adjustments of the EU agricultural sector as well as technical adaptation of crops to climate change. Overall results indicate an increase in yields and production level in the EU agricultural sector due to the climate change. In general, there are relatively small effects at the EU aggregate. For example, the value of land use and welfare change by approximately between -2% and 0.2%. However, there is a stronger impact at regional level with some stronger effects prevailing particularly in the Central and Northern EU and smaller impacts are observed in Southern Europe. Regional impacts of climate change vary by a factor higher up to 10 relative to the aggregate EU impacts. The price adjustments reduce the response of agricultural sector to climate change in particular with respect to production and income changes. The technical adaption of crops to climate change may result in a change production and land use by a factor between 1.4 and 6 relative to no-adaptation situation. |
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TradeM, ftnotmacsur |
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MA @ admin @ |
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4615 |
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Lorite, I.J.; García-Vila, M.; Santos, C.; Ruiz-Ramos, M.; Fereres, E. |
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AquaData and AquaGIS: Two computer utilities for temporal and spatial simulations of water-limited yield with AquaCrop |
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Journal Article |
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Year |
2013 |
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Computers and Electronics in Agriculture |
Abbreviated Journal |
Computers and Electronics in Agriculture |
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96 |
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227-237 |
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software tool; aquacrop; crop simulation model; geographic information system; spatial aggregation; fao crop model; irrigation management; iberian peninsula; southern spain; climate models; impacts; program; europe; system |
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The crop simulation model AquaCrop, recently developed by FAO can be used for a wide range of purposes. However, in its present form, its use over large areas or for applications that require a large number of simulations runs (e.g., long-term analysis), is not practical without developing software to facilitate such applications. Two tools for managing the inputs and outputs of AquaCrop, named AquaData and AquaGIS, have been developed for this purpose and are presented here. Both software utilities have been programmed in Delphi v. 5 and in addition, AquaGIS requires the Geographic Information System (GIS) programming tool MapObjects. These utilities allow the efficient management of input and output files, along with a GIS module to develop spatial analysis and effect spatial visualization of the results, facilitating knowledge dissemination. A sample of application of the utilities is given here, as an AquaCrop simulation analysis of impact of climate change on wheat yield in Southern Spain, which requires extensive input data preparation and output processing. The use of AquaCrop without the two utilities would have required approximately 1000 h of work, while the utilization of AquaData and AquaGIS reduced that time by more than 99%. Furthermore, the use of GIS, made it possible to perform a spatial analysis of the results, thus providing a new option to extend the use of the AquaCrop model to scales requiring spatial and temporal analyses. (C) 2013 Elsevier B.V. All rights reserved. |
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0168-1699 |
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CropM |
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MA @ admin @ |
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4609 |
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Leclère, D.; Jayet, P.-A.; de Noblet-Ducoudré, N. |
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Title |
Farm-level Autonomous Adaptation of European Agricultural Supply to Climate Change |
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Journal Article |
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2013 |
Publication |
Ecological Economics |
Abbreviated Journal |
Ecol. Econ. |
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87 |
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1-14 |
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climate change; agriculture; europe; residual impact; autonomous adaptation; water use efficiency; modeling; land-use; integrated assessment; future scenarios; change impacts; model; vulnerability; performance; emissions; nitrogen; lessons |
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The impact of climate change on European agriculture is subject to a significant uncertainty, which reflects the intertwined nature of agriculture. This issue involves a large number of processes, ranging from field to global scales, which have not been fully integrated yet. In this study, we intend to help bridging this gap by quantifying the effect of farm-scale autonomous adaptations in response to changes in climate. To do so, we use a modelling framework coupling the STICS generic crop model to the AROPAj microeconomic model of European agricultural supply. This study provides a first estimate of the role of such adaptations, consistent at the European scale while detailed across European regions. Farm-scale autonomous adaptations significantly alter the impact of climate change over Europe, by widely alleviating negative impacts on crop yields and gross margins. They significantly increase European production levels. However, they also have an important and heterogeneous impact on irrigation water withdrawals, which exacerbate the differences in ambient atmospheric carbon dioxide concentrations among climate change scenarios. (c) 2012 Elsevier B.V. All rights reserved. |
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0921-8009 |
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TradeM |
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MA @ admin @ |
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4606 |
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Humblot, P.; Jayet, P.A.; Clerino, P.; Leconte-Demarsy, D.; Szopa, S.; Castell, J.F. |
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Title |
Assessment of ozone impacts on farming systems: a bio-economic modeling approach applied to the widely diverse French case |
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Journal Article |
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2013 |
Publication |
Ecological Economics |
Abbreviated Journal |
Ecol. Econ. |
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85 |
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50-58 |
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ozone; bio-economic modeling; agricultural production; land use; greenhouse gas; carbon sequestration; abatement costs; climate-change; crops; agriculture; eu; emissions; benefits; level |
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As a result of anthropogenic activities, ozone is produced in the surface atmosphere, causing direct damage to plants and reducing crop yields. By combining a biophysical crop model with an economic supply model we were able to predict and quantify this effect at a fine spatial resolution. We applied our approach to the very varied French case and showed that ozone has significant productivity and land-use effects. A comparison of moderate and high ozone scenarios for 2030 shows that wheat production may decrease by more than 30% and barley production may increase by more than 14% as surface ozone concentration increases. These variations are due to the direct effect of ozone on yields as well as to modifications in land use caused by a shift toward more ozone-resistant crops: our study predicts a 16% increase in the barley-growing area and an equal decrease in the wheat-growing area. Moreover, mean agricultural gross margin losses can go as high as 2.5% depending on the ozone scenario, and can reach 7% in some particularly affected regions. A rise in ozone concentration was also associated with a reduction of agricultural greenhouse gas emissions of about 2%, as a result of decreased use of nitrogen fertilizers. One noteworthy result was that major impacts, including changes in land use, do not necessarily occur in ozone high concentration zones, and may strongly depend on farm systems and their adaptation capability. Our study suggests that policy makers should view ozone pollution as a major potential threat to agricultural yields. (C) 2012 Elsevier B.V. All rights reserved. |
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0921-8009 |
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TradeM |
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MA @ admin @ |
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4604 |
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