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Brylińska, M.; Sobkowiak, S.; Stefańczyk, E.; Śliwka, J. |
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Title |
Potato cultivation system affects population structure of Phytophthora infestans |
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Journal Article |
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Year |
2016 |
Publication |
Fungal Ecology |
Abbreviated Journal |
Fungal Ecology |
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20 |
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Pages |
132-143 |
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Keywords |
SSR; Population genetic structure; Late blight; Potato; late blight resistance; mating-type; microsatellite markers; phenotypic diversity; sexual reproduction; genotypic diversity; nordic countries; severe outbreaks; sarpo mira; pathogenicity |
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Abstract |
Phytophthora infestans is one of the most destructive potato pathogens. Many factors influence the population structure of P. infestans, including migration, climate and type of potato cultivation. Here, we analyse 365 P. infestans isolates collected from three regions of Poland over three years. We determined mating type, mitochondrial haplotype, resistance to metalaxyl, virulence and polymorphism at 14 simple sequence repeat (SSR) loci. Analysis of SSR markers showed high genetic diversity associated with this population. Model-based structure analysis grouped 299 unique genotypes into four main clusters. The P. infestans isolates collected from the Mlochow region, which has the most intensive level of potato cultivation, formed a distinct cluster, indicating a strong effect of the cultivation system on pathogen population structure. Three clusters contained isolates with frequent presence of three alleles at one locus, which may affect their capacity for sexual reproduction and preserve groups of fit genotypes that propagate asexually. (C) 2016 Elsevier Ltd and The British Mycological Society. |
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1754-5048 |
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CropM, ft_macsur |
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MA @ admin @ |
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4720 |
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Author |
Kahiluoto, H.; Kaseva, J.; Hakala, K.; Himanen, S.J.; Jauhiainen, L.; Rötter, R.P.; Salo, T.; Trnka, M. |
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Title |
Cultivating resilience by empirically revealing response diversity |
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Journal Article |
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Year |
2014 |
Publication |
Global Environmental Change |
Abbreviated Journal |
Glob. Environ. Change |
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25 |
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186-193 |
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Keywords |
generic approach; climate change; food security; agrifood systems; cultivars; adaptive capacity; climate-change; functional diversity; plant-communities; genetic diversity; biodiversity; ecosystems; management; redundancy; evenness; weather |
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Abstract |
Intensified climate and market turbulence requires resilience to a multitude of changes. Diversity reduces the sensitivity to disturbance and fosters the capacity to adapt to various future scenarios. What really matters is diversity of responses. Despite appeals to manage resilience, conceptual developments have not yet yielded a break-through in empirical applications. Here, we present an approach to empirically reveal the ‘response diversity’: the factors of change that are critical to a system are identified, and the response diversity is determined based on the documented component responses to these factors. We illustrate this approach and its added value using an example of securing food supply in the face of climate variability and change. This example demonstrates that quantifying response diversity allows for a new perspective: despite continued increase in cultivar diversity of barley, the diversity in responses to weather declined during the last decade in the regions where most of the barley is grown in Finland. This was due to greater homogeneity in responses among new cultivars than among older ones. Such a decline in the response diversity indicates increased vulnerability and reduced resilience. The assessment serves adaptive management in the face of both ecological and socioeconomic drivers. Supplier diversity in the food retail industry in order to secure affordable food in spite of global price volatility could represent another application. The approach is, indeed, applicable to any system for which it is possible to adopt empirical information regarding the response by its components to the critical factors of variability and change. Targeting diversification in response to critical change brings efficiency into diversity. We propose the generic procedure that is demonstrated in this study as a means to efficiently enhance resilience at multiple levels of agrifood systems and beyond. (C) 2014 The Authors. Published by Elsevier Ltd. |
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0959-3780 |
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CropM |
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MA @ admin @ |
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4525 |
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