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Ramirez-Villegas, J.; Watson, J.; Challinor, A.J. |
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Title |
Identifying traits for genotypic adaptation using crop models |
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Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3451-3462 |
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Keywords |
Adaptation, Physiological/*genetics; Crops, Agricultural/*genetics; Environment; Genotype; *Models, Theoretical; *Quantitative Trait, Heritable; Climate change; crop models; genotypic adaptation; ideotypes; impacts |
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Abstract |
Genotypic adaptation involves the incorporation of novel traits in crop varieties so as to enhance food productivity and stability and is expected to be one of the most important adaptation strategies to future climate change. Simulation modelling can provide the basis for evaluating the biophysical potential of crop traits for genotypic adaptation. This review focuses on the use of models for assessing the potential benefits of genotypic adaptation as a response strategy to projected climate change impacts. Some key crop responses to the environment, as well as the role of models and model ensembles for assessing impacts and adaptation, are first reviewed. Next, the review describes crop-climate models can help focus the development of future-adapted crop germplasm in breeding programmes. While recently published modelling studies have demonstrated the potential of genotypic adaptation strategies and ideotype design, it is argued that, for model-based studies of genotypic adaptation to be used in crop breeding, it is critical that modelled traits are better grounded in genetic and physiological knowledge. To this aim, two main goals need to be pursued in future studies: (i) a better understanding of plant processes that limit productivity under future climate change; and (ii) a coupling between genetic and crop growth models-perhaps at the expense of the number of traits analysed. Importantly, the latter may imply additional complexity (and likely uncertainty) in crop modelling studies. Hence, appropriately constraining processes and parameters in models and a shift from simply quantifying uncertainty to actually quantifying robustness towards modelling choices are two key aspects that need to be included into future crop model-based analyses of genotypic adaptation. |
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0022-0957 1460-2431 |
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CropM, ftnotmacsur |
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MA @ admin @ |
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4645 |
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Author |
McKersie, B. |
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Title |
Planning for food security in a changing climate |
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Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3435-3450 |
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Keywords |
Adaptation, Physiological; *Climate Change; Crops, Agricultural/growth & development; Droughts; *Food Supply; Zea mays/physiology; Climate change; DroughtGard; cropping systems; drought tolerance; genetic engineering; maize; marker-assisted selection; plant breeding |
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The Intergovernmental Panel on Climate Change and other international agencies have concluded that global crop production is at risk due to climate change, population growth, and changing food preferences. Society expects that the agricultural sciences will innovate solutions to these problems and provide food security for the foreseeable future. My thesis is that an integrated research plan merging agronomic and genetic approaches has the greatest probability of success. I present a template for a research plan based on the lessons we have learned from the Green Revolution and from the development of genetically engineered crops that may guide us to meet this expectation. The plan starts with a vision of how the crop management system could change, and I give a few examples of innovations that are very much in their infancy but have significant potential. The opportunities need to be conceptualized on a regional basis for each crop to provide a target for change. The plan gives an overview of how the tools of plant biotechnology can be used to create the genetic diversity needed to implement the envisioned changes in the crop management system, using the development of drought tolerance in maize (Zea mays L.) as an example that has led recently to the commercial release of new hybrids in the USA. The plan requires an interdisciplinary approach that integrates and coordinates research on plant biotechnology, genetics, physiology, breeding, agronomy, and cropping systems to be successful. |
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CropM |
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MA @ admin @ |
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4568 |
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Kunert, K.J.; van Wyk, S.G.; Cullis, C.A.; Vorster, B.J.; Foyer, C.H. |
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Title |
Potential use of phytocystatins in crop improvement, with a particular focus on legumes |
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Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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66 |
Issue |
12 |
Pages |
3559-3570 |
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Crops, Agricultural/*growth & development/metabolism; Cystatins/*metabolism; Cysteine Proteases/metabolism; Fabaceae/*growth & development/metabolism; Plant Proteins/*metabolism; Plant Root Nodulation; Stress, Physiological; Chilling; cystatin; drought; protein degradation; senescence; soybean; stress tolerance |
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Phytocystatins are a well-characterized class of naturally occurring protease inhibitors that function by preventing the catalysis of papain-like cysteine proteases. The action of cystatins in biotic stress resistance has been studied intensively, but relatively little is known about their functions in plant growth and defence responses to abiotic stresses, such as drought. Extreme weather events, such as drought and flooding, will have negative impacts on the yields of crop plants, particularly grain legumes. The concepts that changes in cellular protein content and composition are required for acclimation to different abiotic stresses, and that these adjustments are achieved through regulation of proteolysis, are widely accepted. However, the nature and regulation of the protein turnover machinery that underpins essential stress-induced cellular restructuring remain poorly characterized. Cysteine proteases are intrinsic to the genetic programmes that underpin plant development and senescence, but their functions in stress-induced senescence are not well defined. Transgenic plants including soybean that have been engineered to constitutively express phytocystatins show enhanced tolerance to a range of different abiotic stresses including drought, suggesting that manipulation of cysteine protease activities by altered phytocystatin expression in crop plants might be used to improve resilience and quality in the face of climate change. |
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0022-0957 1460-2431 |
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CropM |
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MA @ admin @ |
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4564 |
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Heinemann, A.B.; Barrios-Perez, C.; Ramirez-Villegas, J.; Arango-Londoño, D.; Bonilla-Findji, O.; Medeiros, J.C.; Jarvis, A. |
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Title |
Variation and impact of drought-stress patterns across upland rice target population of environments in Brazil |
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Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3625-3638 |
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Keywords |
Brazil; Climate; Computer Simulation; Crops, Agricultural/physiology; *Droughts; *Environment; Geography; Oryza/*physiology; Plant Transpiration; *Stress, Physiological; Water; Breeding; Oryza sativa; environment classification; modelling; water deficit. |
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The upland rice (UR) cropped area in Brazil has decreased in the last decade. Importantly, a portion of this decrease can be attributed to the current UR breeding programme strategy, according to which direct grain yield selection is targeted primarily to the most favourable areas. New strategies for more-efficient crop breeding under non-optimal conditions are needed for Brazil’s UR regions. Such strategies should include a classification of spatio-temporal yield variations in environmental groups, as well as a determination of prevalent drought types and their characteristics (duration, intensity, phenological timing, and physiological effects) within those environmental groups. This study used a process-based crop model to support the Brazilian UR breeding programme in their efforts to adopt a new strategy that accounts for the varying range of environments where UR is currently cultivated. Crop simulations based on a commonly grown cultivar (BRS Primavera) and statistical analyses of simulated yield suggested that the target population of environments can be divided into three groups of environments: a highly favorable environment (HFE, 19% of area), a favorable environment (FE, 44%), and least favourable environment (LFE, 37%). Stress-free conditions dominated the HFE group (69% likelihood) and reproductive stress dominated the LFE group (68% likelihood), whereas reproductive and terminal drought stress were found to be almost equally likely to occur in the FE group. For the best and worst environments, we propose specific adaptation focused on the representative stress, while for the FE, wide adaptation to drought is suggested. ‘Weighted selection’ is also a possible strategy for the FE and LFE environment groups. |
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0022-0957 1460-2431 |
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CropM |
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MA @ admin @ |
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4560 |
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Author |
Dockter, C.; Hansson, M. |
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Title |
Improving barley culm robustness for secured crop yield in a changing climate |
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Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3499-3509 |
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Keywords |
Climate Change; Crops, Agricultural/*anatomy & histology/genetics/*growth & development; Edible Grain/anatomy & histology/genetics/growth & development; Genes, Plant; Hordeum/*anatomy & histology/genetics/*growth & development; Phenotype; Barley (Hordeum vulgare); Green Revolution; brassinosteroid; gibberellin; lodging; plant architecture; short culm |
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The Green Revolution combined advancements in breeding and agricultural practice, and provided food security to millions of people. Daily food supply is still a major issue in many parts of the world and is further challenged by future climate change. Fortunately, life science research is currently making huge progress, and the development of future crop plants will be explored. Today, plant breeding typically follows one gene per trait. However, new scientific achievements have revealed that many of these traits depend on different genes and complex interactions of proteins reacting to various external stimuli. These findings open up new possibilities for breeding where variations in several genes can be combined to enhance productivity and quality. In this review we present an overview of genes determining plant architecture in barley, with a special focus on culm length. Many genes are currently known only through their mutant phenotypes, but emerging genomic sequence information will accelerate their identification. More than 1000 different short-culm barley mutants have been isolated and classified in different phenotypic groups according to culm length and additional pleiotropic characters. Some mutants have been connected to deficiencies in biosynthesis and reception of brassinosteroids and gibberellic acids. Still other mutants are unlikely to be connected to these hormones. The genes and corresponding mutations are of potential interest for development of stiff-straw crop plants tolerant to lodging, which occurs in extreme weather conditions with strong winds and heavy precipitation. |
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0022-0957 1460-2431 |
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CropM |
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MA @ admin @ |
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4556 |
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