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Author |
Mansouri, M.; Dumont, B.; Leemans, V.; Destain, M.-F. |
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Title |
Bayesian methods for predicting LAI and soil water content |
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Journal Article |
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Year |
2014 |
Publication |
Precision Agriculture |
Abbreviated Journal |
Precision Agric. |
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Volume |
15 |
Issue |
2 |
Pages  |
184-201 |
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Keywords |
crop model; bayes; data assimilation; extended kalman filtering; particle filtering; variational filtering; leaf-area index; parameter-estimation; crop models; moisture; instruments; management; sensors; state |
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Abstract |
LAI of winter wheat (Triticum aestivum L.) and soil water content of the topsoil (200 mm) and of the subsoil (500 mm) were considered as state variables of a dynamic soil-crop system. This system was assumed to progress according to a Bayesian probabilistic state space model, in which real values of LAI and soil water content were daily introduced in order to correct the model trajectory and reach better future evolution. The chosen crop model was mini STICS which can reduce the computing and execution times while ensuring the robustness of data processing and estimation. To predict simultaneously state variables and model parameters in this non-linear environment, three techniques were used: extended Kalman filtering (EKF), particle filtering (PF), and variational filtering (VF). The significantly improved performance of the VF method when compared to EKF and PF is demonstrated. The variational filter has a low computational complexity and the convergence speed of states and parameters estimation can be adjusted independently. Detailed case studies demonstrated that the root mean square error of the three estimated states (LAI and soil water content of two soil layers) was smaller and that the convergence of all considered parameters was ensured when using VF. Assimilating measurements in a crop model allows accurate prediction of LAI and soil water content at a local scale. As these biophysical properties are key parameters in the crop-plant system characterization, the system has the potential to be used in precision farming to aid farmers and decision makers in developing strategies for site-specific management of inputs, such as fertilizers and water irrigation. |
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1385-2256 |
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CropM, ftnotmacsur |
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MA @ admin @ |
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4629 |
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Webber, H.; Ewert, F.; Kimball, B.A.; Siebert, S.; White, J.W.; Wall, G.W.; Ottman, M.J.; Trawally, D.N.A.; Gaiser, T. |
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Title |
Simulating canopy temperature for modelling heat stress in cereals |
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Journal Article |
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Year |
2016 |
Publication |
Environmental Modelling & Software |
Abbreviated Journal |
Env. Model. Softw. |
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Volume |
77 |
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Pages |
143-155 |
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Keywords |
canopy temperature; heat stress; cereals; crop models; profile relationships; crop production; climate-change; spring wheat; field plots; growth; maize; water; yields; variability |
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Abstract |
Crop models must be improved to account for the effects of heat stress events on crop yields. To date, most approaches in crop models use air temperature to define heat stress intensity as the cumulative sum of thermal times (TT) above a high temperature threshold during a sensitive period for yield formation. However, observational evidence indicates that crop canopy temperature better explains yield reductions associated with high temperature events than air temperature does. This study presents a canopy level energy balance using Monin ObukhovSimilarity Theory (MOST) with simplifications about the canopy resistance that render it suitable for application in crop models and other models of the plant environment. The model is evaluated for a uniform irrigated wheat canopy in Arizona and rainfed maize in Burkina Faso. No single variable regression relationships for key explanatory variables were found that were consistent across sowing dates to explain the deviation of canopy temperature from air temperature. Finally, thermal times determined with simulated canopy temperatures were able to reproduce thermal times calculated with observed canopy temperature, whereas those determined with air temperatures were not. (C) 2015 Elsevier Ltd. All rights reserved. |
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1364-8152 |
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CropM, ft_macsur |
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MA @ admin @ |
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4730 |
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Persson, T.; Kværnø, S.; Höglind, M. |
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Title |
Impact of soil type extrapolation on timothy grass yield under baseline and future climate conditions in southeastern Norway |
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Journal Article |
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Year |
2015 |
Publication |
Climate Research |
Abbreviated Journal |
Clim. Res. |
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65 |
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71-86 |
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Keywords |
climate change scenarios; crop modelling; forage grass; lingra; soil properties; spatial variability; phleum pretense; poaceae; simulation-model; nutritive-value; systems simulation; catimo model; crop models; growth; nitrogen; scale; productivity; regrowth |
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Interactions between soil properties and climate affect forage grass productivity. Dynamic models, simulating crop performance as a function of environmental conditions, are valid for a specific location with given soil and weather conditions. Extrapolations of local soil properties to larger regions can help assess the requirement for soil input in regional yield estimations. Using the LINGRA model, we simulated the regional yield level and variability of timothy, a forage grass, in Akershus and Ostfold counties, Norway. Soils were grouped according to physical similarities according to 4 sets of criteria. This resulted in 66, 15, 5 and 1 groups of soils. The properties of the soil with the largest area was extrapolated to the other soils within each group and input to the simulations. All analyses were conducted for 100 yr of generated weather representing the period 1961-1990, and climate projections for the period 2046-2065, the Intergovernmental Panel on Climate Change greenhouse gas emission scenario A1B, and 4 global climate models. The simulated regional seasonal timothy yields were 5-13% lower on average and had higher inter-annual variability for the least detailed soil extrapolation than for the other soil extrapolations, across climates. There were up to 20% spatial intra-regional differences in simulated yield between soil extrapolations. The results indicate that, for conditions similar to these studied here, a few representative profiles are sufficient for simulations of average regional seasonal timothy yield. More spatially detailed yield analyses would benefit from more detailed soil input. |
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0936-577x 1616-1572 |
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CropM, ft_macsur |
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MA @ admin @ |
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4674 |
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Eyshi Rezaei, E.; Siebert, S.; Ewert, F. |
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Title |
Impact of data resolution on heat and drought stress simulated for winter wheat in Germany |
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Journal Article |
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Year |
2015 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
European Journal of Agronomy |
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65 |
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69-82 |
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Keywords |
crop modeling; heat; drought; spatial resolution; wheat; high-temperature stress; climate-change; grain-yield; crop models; data aggregation; abiotic stress; short periods; variability; growth; duration |
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Heat and drought stress can reduce crop yields considerably which is increasingly assessed with crop models for larger areas. Applying these models originally developed for the field scale at large spatial extent typically implies the use of input data with coarse resolution. Little is known about the effect of data resolution on the simulated impact of extreme events like heat and drought on crops. Hence, in this study the effect of input and output data aggregation on simulated heat and drought stress and their impact on yield of winter wheat is systematically analyzed. The crop model SIMPLACE was applied for the period 1980-2011 across Germany at a resolution of 1 km x 1 km. Weather and soil input data and model output data were then aggregated to 10 km x 10 km, 25 km x 25 km, 50 km x 50 km and 100 km x 100 km resolution to analyze the aggregation effect on heat and drought stress and crop yield. We found that aggregation of model input and output data barely influenced the mean and median of heat and drought stress reduction factors and crop yields simulated across Germany. However, data aggregation resulted in less spatial variability of model results and a reduced severity of simulated stress events, particularly for regions with high heterogeneity in weather and soil conditions. Comparisons of simulations at coarse resolution with those at high resolution showed distinct patterns of positive and negative deviations which compensated each other so that aggregation effects for large regions were small for mean or median yields. Therefore, modelling at a resolution of 100 km x 100 km was sufficient to determine mean wheat yield as affected by heat and drought stress for Germany. Further research is required to clarify whether the results can be generalized across crop models differing in structure and detail. Attention should also be given to better understand the effect of data resolution on interactions between heat and drought impacts. (C) 2015 Elsevier B.V. All rights reserved. |
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1161-0301 |
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CropM, ft_macsur |
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MA @ admin @ |
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4751 |
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Dono, G.; Cortignani, R.; Dell’Unto, D.; Deligios, P.; Doro, L.; Lacetera, N.; Mula, L.; Pasqui, M.; Quaresima, S.; Vitali, A.; Roggero, P.P. |
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Title |
Winners and losers from climate change in agriculture: Insights from a case study in the Mediterranean basin |
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Journal Article |
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Year |
2016 |
Publication |
Agricultural Systems |
Abbreviated Journal |
Agricultural Systems |
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147 |
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65-75 |
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Adaptation of farms to CC; Mediterranean region; Discrete Stochastic Programming; Regional Atmospheric Modelling System; Crop models; Livestock models |
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The Mediterranean region has always shown a marked inter-annual variability in seasonal weather, creating uncertainty in decisional processes of cultivation and livestock breeding that should not be neglected when modeling farmers’ adaptive responses. This is especially relevant when assessing the impact of climate change (CC), which modifies the atmospheric variability and generates new uncertainty conditions, and the possibility of adaptation of agriculture. Our analysis examines this aspect reconstructing the effects of inter-annual climate variability in a diversified farming district that well represents a wide range of rainfed and irrigated agricultural systems in the Mediterranean area. We used a Regional Atmospheric Modelling System and a weather generator to generate 150 stochastic years of the present and near future climate. Then, we implemented calibrated crop and livestock models to estimate the corresponding productive responses in the form of probability distribution functions (PDFs) under the two climatic conditions. We assumed these PDFs able to represent the expectations of farmers in a discrete stochastic programming (DSP) model that reproduced their economic behaviour under uncertainty conditions. The comparison of the results in the two scenarios provided an assessment of the impact of CC, also taking into account the possibility of adjustment allowed by present technologies and price regimes. The DSP model is built in blocks that represent the farm typologies operating in the study area, each one with its own resource endowment, decisional constraints and economic response. Under this latter aspect, major differences emerged among farm typologies and sub-zones of the study area. A crucial element of differentiation was water availability, since only irrigated C3 crops took full advantage from the fertilization effect of increasing atmospheric CO2 concentration. Rainfed crop production was depressed by the expected reduction of spring rainfall associated to the higher temperatures. So, a dualism emerges between the smaller impact on crop production in the irrigated plain sub-zone, equipped with collective water networks and abundant irrigation resources, and the major negative impact in the hilly area, where these facilities and resources are absent. However intensive dairy farming was also negatively affected in terms of milk production and quality, and cattle mortality because of the increasing summer temperatures. This provides explicit guidance for addressing strategic adaptation policies and for framing farmers’ perception of CC, in order to help them to develop an awareness of the phenomena that are already in progress, which is a prerequisite for effective adaptation responses. |
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0308521x |
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CropM, LiveM, TradeM, ft_macsur |
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MA @ admin @ |
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4756 |
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