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Author  |
Porter, J.R.; Christensen, S. |
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Title |
Deconstructing crop processes and models via identities |
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Journal Article |
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Year |
2013 |
Publication |
Plant Cell and Environment |
Abbreviated Journal |
Plant Cell and Environment |
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Volume |
36 |
Issue |
11 |
Pages |
1919-1925 |
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Keywords |
Biomass; Carbon Dioxide/pharmacology; Climate Change; Crops, Agricultural/drug effects/*physiology; *Models, Biological; Kaya-Porter identity; crop models; deconstruction; resource use efficiency |
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Abstract |
This paper is part review and part opinion piece; it has three parts of increasing novelty and speculation in approach. The first presents an overview of how some of the major crop simulation models approach the issue of simulating the responses of crops to changing climatic and weather variables, mainly atmospheric CO2 concentration and increased and/or varying temperatures. It illustrates an important principle in models of a single cause having alternative effects and vice versa. The second part suggests some features, mostly missing in current crop models, that need to be included in the future, focussing on extreme events such as high temperature or extreme drought. The final opinion part is speculative but novel. It describes an approach to deconstruct resource use efficiencies into their constituent identities or elements based on the Kaya-Porter identity, each of which can be examined for responses to climate and climatic change. We give no promise that the final part is correct’, but we hope it can be a stimulation to thought, hypothesis and experiment, and perhaps a new modelling approach. |
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2016-10-31 |
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0140-7791 |
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CropM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
4799 |
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Author |
Persson, T.; Kværnø, S.; Höglind, M. |
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Title |
Impact of soil type extrapolation on timothy grass yield under baseline and future climate conditions in southeastern Norway |
Type |
Journal Article |
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Year |
2015 |
Publication |
Climate Research |
Abbreviated Journal |
Clim. Res. |
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Volume |
65 |
Issue |
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Pages |
71-86 |
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Keywords |
climate change scenarios; crop modelling; forage grass; lingra; soil properties; spatial variability; phleum pretense; poaceae; simulation-model; nutritive-value; systems simulation; catimo model; crop models; growth; nitrogen; scale; productivity; regrowth |
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Abstract |
Interactions between soil properties and climate affect forage grass productivity. Dynamic models, simulating crop performance as a function of environmental conditions, are valid for a specific location with given soil and weather conditions. Extrapolations of local soil properties to larger regions can help assess the requirement for soil input in regional yield estimations. Using the LINGRA model, we simulated the regional yield level and variability of timothy, a forage grass, in Akershus and Ostfold counties, Norway. Soils were grouped according to physical similarities according to 4 sets of criteria. This resulted in 66, 15, 5 and 1 groups of soils. The properties of the soil with the largest area was extrapolated to the other soils within each group and input to the simulations. All analyses were conducted for 100 yr of generated weather representing the period 1961-1990, and climate projections for the period 2046-2065, the Intergovernmental Panel on Climate Change greenhouse gas emission scenario A1B, and 4 global climate models. The simulated regional seasonal timothy yields were 5-13% lower on average and had higher inter-annual variability for the least detailed soil extrapolation than for the other soil extrapolations, across climates. There were up to 20% spatial intra-regional differences in simulated yield between soil extrapolations. The results indicate that, for conditions similar to these studied here, a few representative profiles are sufficient for simulations of average regional seasonal timothy yield. More spatially detailed yield analyses would benefit from more detailed soil input. |
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0936-577x 1616-1572 |
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CropM, ft_macsur |
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MA @ admin @ |
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4674 |
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Author |
Mansouri, M.; Dumont, B.; Leemans, V.; Destain, M.-F. |
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Title |
Bayesian methods for predicting LAI and soil water content |
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Journal Article |
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Year |
2014 |
Publication |
Precision Agriculture |
Abbreviated Journal |
Precision Agric. |
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Volume |
15 |
Issue |
2 |
Pages |
184-201 |
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Keywords |
crop model; bayes; data assimilation; extended kalman filtering; particle filtering; variational filtering; leaf-area index; parameter-estimation; crop models; moisture; instruments; management; sensors; state |
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Abstract |
LAI of winter wheat (Triticum aestivum L.) and soil water content of the topsoil (200 mm) and of the subsoil (500 mm) were considered as state variables of a dynamic soil-crop system. This system was assumed to progress according to a Bayesian probabilistic state space model, in which real values of LAI and soil water content were daily introduced in order to correct the model trajectory and reach better future evolution. The chosen crop model was mini STICS which can reduce the computing and execution times while ensuring the robustness of data processing and estimation. To predict simultaneously state variables and model parameters in this non-linear environment, three techniques were used: extended Kalman filtering (EKF), particle filtering (PF), and variational filtering (VF). The significantly improved performance of the VF method when compared to EKF and PF is demonstrated. The variational filter has a low computational complexity and the convergence speed of states and parameters estimation can be adjusted independently. Detailed case studies demonstrated that the root mean square error of the three estimated states (LAI and soil water content of two soil layers) was smaller and that the convergence of all considered parameters was ensured when using VF. Assimilating measurements in a crop model allows accurate prediction of LAI and soil water content at a local scale. As these biophysical properties are key parameters in the crop-plant system characterization, the system has the potential to be used in precision farming to aid farmers and decision makers in developing strategies for site-specific management of inputs, such as fertilizers and water irrigation. |
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ISSN |
1385-2256 |
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CropM, ftnotmacsur |
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MA @ admin @ |
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4629 |
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Author |
Kersebaum, K.C.; Boote, K.J.; Jorgenson, J.S.; Nendel, C.; Bindi, M.; Frühauf, C.; Gaiser, T.; Hoogenboom, G.; Kollas, C.; Olesen, J.E.; Rötter, R.P.; Ruget, F.; Thorburn, P.J.; Trnka, M.; Wegehenkel, M. |
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Title |
Analysis and classification of data sets for calibration and validation of agro-ecosystem models |
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Journal Article |
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Year |
2015 |
Publication |
Environmental Modelling & Software |
Abbreviated Journal |
Env. Model. Softw. |
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Volume |
72 |
Issue |
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Pages |
402-417 |
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Keywords |
field experiments; data quality; crop modelling; data requirement; minimum data; software; different climatic zones; soil-moisture sensors; spatial variability; nitrogen dynamics; crop models; systems simulation; wheat yields; elevated co2; growth; field |
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Experimental field data are used at different levels of complexity to calibrate, validate and improve agroecosystem models to enhance their reliability for regional impact assessment. A methodological framework and software are presented to evaluate and classify data sets into four classes regarding their suitability for different modelling purposes. Weighting of inputs and variables for testing was set from the aspect of crop modelling. The software allows users to adjust weights according to their specific requirements. Background information is given for the variables with respect to their relevance for modelling and possible uncertainties. Examples are given for data sets of the different classes. The framework helps to assemble high quality data bases, to select data from data bases according to modellers requirements and gives guidelines to experimentalists for experimental design and decide on the most effective measurements to improve the usefulness of their data for modelling, statistical analysis and data assimilation. (C) 2015 Elsevier Ltd. All rights reserved. |
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1364-8152 |
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CropM, ft_macsur |
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MA @ admin @ |
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4563 |
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Author |
Hoffmann, H.; Zhao, G.; Asseng, S.; Bindi, M.; Biernath, C.; Constantin, J.; Coucheney, E.; Dechow, R.; Doro, L.; Eckersten, H.; Gaiser, T.; Grosz, B.; Heinlein, F.; Kassie, B.T.; Kersebaum, K.-C.; Klein, C.; Kuhnert, M.; Lewan, E.; Moriondo, M.; Nendel, C.; Priesack, E.; Raynal, H.; Roggero, P.P.; Rötter, R.P.; Siebert, S.; Specka, X.; Tao, F.; Teixeira, E.; Trombi, G.; Wallach, D.; Weihermüller, L.; Yeluripati, J.; Ewert, F. |
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Title |
Impact of spatial soil and climate input data aggregation on regional yield simulations |
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Journal Article |
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Year |
2016 |
Publication |
PLoS One |
Abbreviated Journal |
PLoS One |
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Volume |
11 |
Issue |
4 |
Pages |
e0151782 |
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Keywords |
systems simulation; nitrogen dynamics; winter-wheat; crop models; data resolution; scale; water; variability; calibration; weather |
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Abstract |
We show the error in water-limited yields simulated by crop models which is associated with spatially aggregated soil and climate input data. Crop simulations at large scales (regional, national, continental) frequently use input data of low resolution. Therefore, climate and soil data are often generated via averaging and sampling by area majority. This may bias simulated yields at large scales, varying largely across models. Thus, we evaluated the error associated with spatially aggregated soil and climate data for 14 crop models. Yields of winter wheat and silage maize were simulated under water-limited production conditions. We calculated this error from crop yields simulated at spatial resolutions from 1 to 100 km for the state of North Rhine-Westphalia, Germany. Most models showed yields biased by <15% when aggregating only soil data. The relative mean absolute error (rMAE) of most models using aggregated soil data was in the range or larger than the inter-annual or inter-model variability in yields. This error increased further when both climate and soil data were aggregated. Distinct error patterns indicate that the rMAE may be estimated from few soil variables. Illustrating the range of these aggregation effects across models, this study is a first step towards an ex-ante assessment of aggregation errors in large-scale simulations. |
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English |
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1932-6203 |
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CropM, ft_macsur |
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MA @ admin @ |
Serial |
4725 |
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