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Wallach, D.; Thorburn, P.; Asseng, S.; Challinor, A.J.; Ewert, F.; Jones, J.W.; Rötter, R.; Ruane, A. |
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Title  |
Estimating model prediction error: Should you treat predictions as fixed or random |
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Journal Article |
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Year |
2016 |
Publication |
Environmental Modelling & Software |
Abbreviated Journal |
Env. Model. Softw. |
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Volume |
84 |
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Pages |
529-539 |
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Keywords |
Crop model; Uncertainty; Prediction error; Parameter uncertainty; Input uncertainty; Model structure uncertainty |
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Abstract |
Crop models are important tools for impact assessment of climate change, as well as for exploring management options under current climate. It is essential to evaluate the uncertainty associated with predictions of these models. We compare two criteria of prediction error; MSEPfixed, which evaluates mean squared error of prediction for a model with fixed structure, parameters and inputs, and MSEPuncertain(X), which evaluates mean squared error averaged over the distributions of model structure, inputs and parameters. Comparison of model outputs with data can be used to estimate the former. The latter has a squared bias term, which can be estimated using hindcasts, and a model variance term, which can be estimated from a simulation experiment. The separate contributions to MSEPuncertain(X) can be estimated using a random effects ANOVA. It is argued that MSEPuncertain(X) is the more informative uncertainty criterion, because it is specific to each prediction situation. |
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1364-8152 |
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CropM, ft_macsur |
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MA @ admin @ |
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4773 |
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Zhao, G.; Hoffmann, H.; Yeluripati, J.; Xenia, S.; Nendel, C.; Coucheney, E.; Kuhnert, M.; Tao, F.; Constantin, J.; Raynal, H.; Teixeira, E.; Grosz, B.; Doro, L.; Kiese, R.; Eckersten, H.; Haas, E.; Cammarano, D.; Kassie, B.; Moriondo, M.; Trombi, G.; Bindi, M.; Biernath, C.; Heinlein, F.; Klein, C.; Priesack, E.; Lewan, E.; Kersebaum, K.-C.; Rötter, R.; Roggero, P.P.; Wallach, D.; Asseng, S.; Siebert, S.; Gaiser, T.; Ewert, F. |
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Title |
Evaluating the precision of eight spatial sampling schemes in estimating regional means of simulated yield for two crops |
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Journal Article |
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Year |
2016 |
Publication |
Environmental Modelling & Software |
Abbreviated Journal |
Env. Model. Softw. |
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Volume |
80 |
Issue |
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Pages |
100-112 |
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Keywords |
Crop model; Stratified random sampling; Simple random sampling; Clustering; Up-scaling; Model comparison; Precision gain; species distribution models; systems simulation; weather data; large-scale; design; soil; optimization; growth; apsim; autocorrelation |
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We compared the precision of simple random sampling (SimRS) and seven types of stratified random sampling (StrRS) schemes in estimating regional mean of water-limited yields for two crops (winter wheat and silage maize) that were simulated by fourteen crop models. We found that the precision gains of StrRS varied considerably across stratification methods and crop models. Precision gains for compact geographical stratification were positive, stable and consistent across crop models. Stratification with soil water holding capacity had very high precision gains for twelve models, but resulted in negative gains for two models. Increasing the sample size monotonously decreased the sampling errors for all the sampling schemes. We conclude that compact geographical stratification can modestly but consistently improve the precision in estimating regional mean yields. Using the most influential environmental variable for stratification can notably improve the sampling precision, especially when the sensitivity behavior of a crop model is known. |
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1364-8152 |
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CropM, ft_macsur |
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MA @ admin @ |
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4724 |
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Persson, T.; Höglind, M.; Gustavsson, A.-M.; Halling, M.; Jauhiainen, L.; Niemeläinen, O.; Thorvaldsson, G.; Virkajärvi, P. |
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Title |
Evaluation of the LINGRA timothy model under Nordic conditions |
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Journal Article |
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Year |
2014 |
Publication |
Field Crops Research |
Abbreviated Journal |
Field Crops Research |
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161 |
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Pages |
87-97 |
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Keywords |
crop model; forage grass; perennial ley; simulation model; nutritive-value; climate-change; systems simulation; growth; dynamics; crop; performance; regrowth; calibration; pastures |
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Simulation models are frequently applied to determine the production potential of forage grasses under various scenarios, including climate change. Thorough calibrations and evaluations of forage grass models can help improve their applicability. This study evaluated the ability of the Light Interception and Utilization Simulator-GRAss (LINGRA) model to predict biomass yield of timothy (Phleum pratense L. cv. Grindstad) in the Nordic countries. Variety trial data for the first and second year after establishment were obtained for seven locations: Jokioinen, Finland (60 degrees 48 ‘ N; 23 degrees 29 ‘ E), Maaninka, Finland (63 degrees 09 ‘ N; 27 degrees 18 ‘ E), Korpa, Iceland (64 degrees 09 ‘ N; 21 degrees 45 ‘ W), Srheim, Norway (58 degrees 41 ‘ N; 5 degrees 39 ‘ E), Lillerud, Sweden (59 degrees 24’ N; 13 degrees 16 ‘ E), Ostersund, Sweden (63 degrees 15 ‘ N; 14 degrees 34 ‘ E) and Ulna Sweden (63 degrees 49 ‘ N; 20 degrees 13 ‘ E) from 1992 to 2012. Two calibrations of the LINGRA model were carried out using Bayesian techniques. In the first of these (SRrheim calibration), data on biomass yield and underlying variables obtained from independent field trials at Srheim were used. In the second (Nordic calibration), biomass data from the other locations were used as well. The model was validated against the remaining set of biomass yields from all locations not included in the Nordic calibration. The observed total seasonal yield the first and second year after establishment was 913 and 991 g DM m(-2) respectively on average across the locations. The corresponding average simulated yield after the Srheim calibration was 1044 (root mean square error (RMSE) 258) and 1112 g DM m(-2) (RMSE 312), respectively. After the Nordic calibration, the simulated average total seasonal yield was 863 (RMSE 242) the first year and 927 g DM m(-2) (RMSE 271) the second year after establishment. The differences between the observed and simulated first cut yield followed the same patterns, whereas the prediction accuracy for second cut yield did not differ substantially between the calibration approaches.Using the parameter set from the Nordic region decreased the model predictability at Srheim compared with only using model parameters derived from this location. These results show that using biomass data from several locations, instead of only one specific location, in the calibration of the LINGRA model improved the overall prediction accuracy of first cut dry matter yield and total seasonal dry matter yield across an environmentally heterogeneous region. To further analyse the usefulness of including multi-site data in forage grass model calibrations, other forage grass models could be evaluated against the same dataset. |
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0378-4290 |
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CropM, ft_macsur |
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MA @ admin @ |
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4634 |
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García-López, J.; Lorite, I.J.; García-Ruiz, R.; Domínguez, J. |
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Title |
Evaluation of three simulation approaches for assessing yield of rainfed sunflower in a Mediterranean environment for climate change impact modelling |
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Journal Article |
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Year |
2014 |
Publication |
Climatic Change |
Abbreviated Journal |
Clim. Change |
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124 |
Issue |
1-2 |
Pages |
147-162 |
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Keywords |
winter-wheat; water-stress; irrigation management; high-temperature; oil quality; oilcrop-sun; crop model; responses; variability; growth |
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Abstract |
The determination of the impact of climate change on crop yield at a regional scale requires the development of new modelling methodologies able to generate accurate yield estimates with reduced available data. In this study, different simulation approaches for assessing yield have been evaluated. In addition to two well-known models (AquaCrop and Stewart function), a methodological proposal considering a simplified approach using an empirical model (SOM) has been included in the analysis. This empirical model was calibrated using rainfed sunflower experimental field data from three sites located in Andalusia, southern Spain, and validated using two additional locations, providing very satisfactory results compared with the other models with higher data requirements. Thus, only requiring weather data (accumulated rainfall from the beginning of the season fixed on September 1st, and maximum temperature during flowering) the approach accurately described the temporal and spatial yield variability observed (RMSE = 391 kg ha(-1)). The satisfactory results for assessing yield of sunflower under semi-arid conditions obtained in this study demonstrate the utility of empirical approaches with few data requirements, providing an excellent decision tool for climate change impact analyses at a regional scale, where available data is very limited. |
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0165-0009 1573-1480 |
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CropM |
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MA @ admin @ |
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4622 |
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Author |
Zheng, B.; Chapman, S.C.; Christopher, J.T.; Frederiks, T.M.; Chenu, K. |
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Title |
Frost trends and their estimated impact on yield in the Australian wheatbelt |
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Journal Article |
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Year |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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66 |
Issue |
12 |
Pages |
3611-3623 |
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Keywords |
Adaptation, Physiological/genetics; Australia; Computer Simulation; Ecotype; *Freezing; Genotype; Geography; Seasons; Triticum/genetics/*growth & development/physiology; Breeding; climate change; crop adaptation; crop modelling; ideotype; post-head-emergence frost; reproductive frost; spring radiant frost |
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Radiant spring frosts occurring during reproductive developmental stages can result in catastrophic yield loss for wheat producers. To better understand the spatial and temporal variability of frost, the occurrence and impact of frost events on rain-fed wheat production was estimated across the Australian wheatbelt for 1957-2013 using a 0.05 ° gridded weather data set. Simulated yield outcomes at 60 key locations were compared with those for virtual genotypes with different levels of frost tolerance. Over the last six decades, more frost events, later last frost day, and a significant increase in frost impact on yield were found in certain regions of the Australian wheatbelt, in particular in the South-East and West. Increasing trends in frost-related yield losses were simulated in regions where no significant trend of frost occurrence was observed, due to higher mean temperatures accelerating crop development and causing sensitive post-heading stages to occur earlier, during the frost risk period. Simulations indicated that with frost-tolerant lines the mean national yield could be improved by up to 20% through (i) reduced frost damage (~10% improvement) and (ii) the ability to use earlier sowing dates (adding a further 10% improvement). In the simulations, genotypes with an improved frost tolerance to temperatures 1 °C lower than the current 0 °C reference provided substantial benefit in most cropping regions, while greater tolerance (to 3 °C lower temperatures) brought further benefits in the East. The results indicate that breeding for improved reproductive frost tolerance should remain a priority for the Australian wheat industry, despite warming climates. |
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0022-0957 |
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CropM |
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MA @ admin @ |
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4580 |
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