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Zhao, G.; Hoffmann, H.; van Bussel, L.G.J.; Enders, A.; Specka, X.; Sosa, C.; Yeluripati, J.; Tao, F.L.; Constantin, J.; Raynal, H.; Teixeira, E.; Grosz, B.; Doro, L.; Zhao, Z.G.; Nendel, C.; Kiese, R.; Eckersten, H.; Haas, E.; Vanuytrecht, E.; Wang, E.; Kuhnert, M.; Trombi, G.; Moriondo, M.; Bindi, M.; Lewan, E.; Bach, M.; Kersebaum, K.C.; Rotter, R.; Roggero, P.P.; Wallach, D.; Cammarano, D.; Asseng, S.; Krauss, G.; Siebert, S.; Gaiser, T.; Ewert, F. |
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Title |
Effect of weather data aggregation on regional crop simulation for different crops, production conditions, and response variables |
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Journal Article |
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Year |
2015 |
Publication |
Climate Research |
Abbreviated Journal |
Clim. Res. |
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Volume |
65 |
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Pages |
141-157 |
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Keywords  |
crop model; model comparison; spatial resolution; data aggregation; spatial heterogeneity; scaling; climate-change scenarios; sub-saharan africa; winter-wheat; spatial-resolution; yield response; input data; systems simulation; large-scale; soil data; part i |
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Abstract |
We assessed the weather data aggregation effect (DAE) on the simulation of cropping systems for different crops, response variables, and production conditions. Using 13 process-based crop models and the ensemble mean, we simulated 30 yr continuous cropping systems for 2 crops (winter wheat and silage maize) under 3 production conditions for the state of North Rhine-Westphalia, Germany. The DAE was evaluated for 5 weather data resolutions (i.e. 1, 10, 25, 50, and 100 km) for 3 response variables including yield, growing season evapotranspiration, and water use efficiency. Five metrics, viz. the spatial bias (Delta), average absolute deviation (AAD), relative AAD, root mean squared error (RMSE), and relative RMSE, were used to evaluate the DAE on both the input weather data and simulated results. For weather data, we found that data aggregation narrowed the spatial variability but widened the., especially across mountainous areas. The DAE on loss of spatial heterogeneity and hotspots was stronger than on the average changes over the region. The DAE increased when coarsening the spatial resolution of the input weather data. The DAE varied considerably across different models, but changed only slightly for different production conditions and crops. We conclude that if spatially detailed information is essential for local management decision, higher resolution is desirable to adequately capture the spatial variability for heterogeneous regions. The required resolution depends on the choice of the model as well as the environmental condition of the study area. |
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0936-577x |
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CropM, ft_macsur |
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MA @ admin @ |
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4754 |
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Dumont, B.; Leemans, V.; Mansouri, M.; Bodson, B.; Destain, J.-P.; Destain, M.-F. |
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Title |
Parameter identification of the STICS crop model, using an accelerated formal MCMC approach |
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Journal Article |
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Year |
2014 |
Publication |
Environmental Modelling & Software |
Abbreviated Journal |
Env. Model. Softw. |
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Volume |
52 |
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121-135 |
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Keywords |
crop model; parameter estimation; bayes; stics; dream; global sensitivity-analysis; simulation-model; nitrogen balances; bayesian-approach; generic model; wheat; prediction; water; optimization; algorithm |
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Abstract |
This study presents a Bayesian approach for the parameters’ identification of the STICS crop model based on the recently developed Differential Evolution Adaptive Metropolis (DREAM) algorithm. The posterior distributions of nine specific crop parameters of the STICS model were sampled with the aim to improve the growth simulations of a winter wheat (Triticum aestivum L) culture. The results obtained with the DREAM algorithm were initially compared to those obtained with a Nelder-Mead Simplex algorithm embedded within the OptimiSTICS package. Then, three types of likelihood functions implemented within the DREAM algorithm were compared, namely the standard least square, the weighted least square, and a transformed likelihood function that makes explicit use of the coefficient of variation (CV). The results showed that the proposed CV likelihood function allowed taking into account both noise on measurements and heteroscedasticity which are regularly encountered in crop modelling. (C) 2013 Elsevier Ltd. All rights reserved. |
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1364-8152 |
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CropM |
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MA @ admin @ |
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4520 |
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Author |
Mansouri, M.; Destain, M.-F. |
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Title |
Predicting biomass and grain protein content using Bayesian methods |
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Journal Article |
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Year |
2015 |
Publication |
Stochastic Environmental Research and Risk Assessment |
Abbreviated Journal |
Stoch. Environ. Res. Risk Assess. |
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29 |
Issue |
4 |
Pages |
1167-1177 |
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Keywords |
crop model; particle filter; prediction; ensemble kalman filter; parameter-estimation; particle filters; decision-support; state estimation; model; nitrogen; navigation; tracking; systems |
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This paper deals with the problem of predicting biomass and grain protein content using improved particle filtering (IPF) based on minimizing the Kullback-Leibler divergence. The performances of IPF are compared with those of the conventional particle filtering (PF) in two comparative studies. In the first one, we apply IPF and PF at a simple dynamic crop model with the aim to predict a single state variable, namely the winter wheat biomass, and to estimate several model parameters. In the second study, the proposed IPF and the PF are applied to a complex crop model (AZODYN) to predict a winter-wheat quality criterion, namely the grain protein content. The results of both comparative studies reveal that the IPF method provides a better estimation accuracy than the PF method. The benefit of the IPF method lies in its ability to provide accuracy related advantages over the PF method since, unlike the PF which depends on the choice of the sampling distribution used to estimate the posterior distribution, the IPF yields an optimum choice of this sampling distribution, which also utilizes the observed data. The performance of the proposed method is evaluated in terms of estimation accuracy, root mean square error, mean absolute error and execution times. |
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1436-3240 1436-3259 |
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CropM |
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MA @ admin @ |
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4664 |
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Challinor, A.J.; Müller, C.; Asseng, S.; Deva, C.; Nicklin, K.J.; Wallach, D.; Vanuytrecht, E.; Whitfield, S.; Ramirez-Villegas, J.; Koehler, A.-K. |
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Title |
Improving the use of crop models for risk assessment and climate change adaptation |
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Journal Article |
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Year |
2017 |
Publication |
Agricultural Systems |
Abbreviated Journal |
Agric. Syst. |
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159 |
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296-306 |
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Keywords |
Crop model; Risk assessment; Climate change impacts; Adaptation; Climate models; Uncertainty |
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Highlights
• 14 criteria for use of crop models in assessments of impacts, adaptation and risk • Working with stakeholders to identify timing of risks is key to risk assessments. • Multiple methods needed to critically assess the use of climate model output • Increasing transparency and inter-comparability needed in risk assessments
Abstract
Crop models are used for an increasingly broad range of applications, with a commensurate proliferation of methods. Careful framing of research questions and development of targeted and appropriate methods are therefore increasingly important. In conjunction with the other authors in this special issue, we have developed a set of criteria for use of crop models in assessments of impacts, adaptation and risk. Our analysis drew on the other papers in this special issue, and on our experience in the UK Climate Change Risk Assessment 2017 and the MACSUR, AgMIP and ISIMIP projects. The criteria were used to assess how improvements could be made to the framing of climate change risks, and to outline the good practice and new developments that are needed to improve risk assessment. Key areas of good practice include: i. the development, running and documentation of crop models, with attention given to issues of spatial scale and complexity; ii. the methods used to form crop-climate ensembles, which can be based on model skill and/or spread; iii. the methods used to assess adaptation, which need broadening to account for technological development and to reflect the full range options available. The analysis highlights the limitations of focussing only on projections of future impacts and adaptation options using pre-determined time slices. Whilst this long-standing approach may remain an essential component of risk assessments, we identify three further key components: 1. Working with stakeholders to identify the timing of risks. What are the key vulnerabilities of food systems and what does crop-climate modelling tell us about when those systems are at risk? 2. Use of multiple methods that critically assess the use of climate model output and avoid any presumption that analyses should begin and end with gridded output. 3. Increasing transparency and inter-comparability in risk assessments. Whilst studies frequently produce ranges that quantify uncertainty, the assumptions underlying these ranges are not always clear. We suggest that the contingency of results upon assumptions is made explicit via a common uncertainty reporting format; and/or that studies are assessed against a set of criteria, such as those presented in this paper. |
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phase 2+ |
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0308521x |
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CropM |
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CropM, ft_macsur |
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Call Number |
MA @ admin @ |
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5175 |
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Author |
Angulo, C.; Gaiser, T.; Rötter, R.P.; Børgesen, C.D.; Hlavinka, P.; Trnka, M.; Ewert, F. |
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Title |
‘Fingerprints’ of four crop models as affected by soil input data aggregation |
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Journal Article |
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2014 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
European Journal of Agronomy |
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61 |
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35-48 |
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Keywords |
crop model; soil data; spatial resolution; yield distribution; aggregation; us great-plains; climate-change; integrated assessment; simulating wheat; yields; scale; productivity; uncertainty; variability; responses |
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Abstract |
• Systematic analysis of the influence of spatial soil data resolution on simulated regional yields and total growing season evapotranspiration. • The responses of four crop models of different complexity are compared. • Differences between models are larger than the effect of the chosen spatial soil data resolution. • Low influence of soil data resolution due to: high precipitation amount, methods for calculating water retention and method of data aggregation. The spatial variability of soil properties is an important driver of yield variability at both field and regional scale. Thus, when using crop growth simulation models, the choice of spatial resolution of soil input data might be key in order to accurately reproduce observed yield variability. In this study we used four crop models (SIMPLACE<LINTUL-SLIM>, DSSAT-CSM, EPIC and DAISY) differing in the detail of modeling above-ground biomass and yield as well as of modeling soil water dynamics, water uptake and drought effects on plants to simulate winter wheat in two (agro-climatologically and geo-morphologically) contrasting regions of the federal state of North-Rhine-Westphalia (Germany) for the period from 1995 to 2008. Three spatial resolutions of soil input data were taken into consideration, corresponding to the following map scales: 1:50 000, 1:300 000 and 1:1 000 000. The four crop models were run for water-limited production conditions and model results were evaluated in the form of frequency distributions, depicted by bean-plots. In both regions, soil data aggregation had very small influence on the shape and range of frequency distributions of simulated yield and simulated total growing season evapotranspiration for all models. Further analysis revealed that the small influence of spatial resolution of soil input data might be related to: (a) the high precipitation amount in the region which partly masked differences in soil characteristics for water holding capacity, (b) the loss of variability in hydraulic soil properties due to the methods applied to calculate water retention properties of the used soil profiles, and (c) the method of soil data aggregation. No characteristic “fingerprint” between sites, years and resolutions could be found for any of the models. Our results support earlier recommendation to evaluate model results on the basis of frequency distributions since these offer quick and better insight into the distribution of simulation results as compared to summary statistics only. Finally, our results support conclusions from other studies about the usefulness of considering a multi-model approach to quantify the uncertainty in simulated yields introduced by the crop growth simulation approach when exploring the effects of scaling for regional yield impact assessments. |
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1161-0301 |
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CropM, ft_macsur |
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MA @ admin @ |
Serial |
4511 |
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