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Wallach, D.; Nissanka, S.P.; Karunaratne, A.S.; Weerakoon, W.M.W.; Thorburn, P.J.; Boote, K.J.; Jones, J.W. |
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Title |
Accounting for both parameter and model structure uncertainty in crop model predictions of phenology: A case study on rice |
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Journal Article |
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Year  |
2016 |
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European Journal of Agronomy |
Abbreviated Journal |
European Journal of Agronomy |
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Keywords |
Uncertainty; Phenology; Parameter uncertainty; Multi-model ensemble; Generalized least squares; Rice; Crop model; APSIM; DSSAT |
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Abstract |
We consider predictions of the impact of climate warming on rice development times in Sri Lanka. The major emphasis is on the uncertainty of the predictions, and in particular on the estimation of mean squared error of prediction. Three contributions to mean squared error are considered. The first is parameter uncertainty that results from model calibration. To take proper account of the complex data structure, generalized least squares is used to estimate the parameters and the variance-covariance matrix of the parameter estimators. The second contribution is model structure uncertainty, which we estimate using two different models. An ANOVA analysis is used to separate the contributions of parameter and model uncertainty to mean squared error. The third contribution is model error, which is estimated using hindcasts. Mean squared error of prediction of time from emergence to maturity, for baseline +2 °C, is estimated as 108 days2, with model error contributing 86 days2, followed by model structure uncertainty which contributes 15 days2 and parameter uncertainty which contributes 7 days2. We also show how prediction uncertainty is reduced if prediction concerns development time averaged over years, or the difference in development time between baseline and warmer temperatures. |
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2016-09-13 |
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1161-0301 |
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Article |
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CropM |
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CropM; wos; ftnotmacsur; wsnotyet; |
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MA @ admin @ |
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4777 |
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Maiorano, A.; Martre, P.; Asseng, S.; Ewert, F.; Müller, C.; Rötter, R.P.; Ruane, A.C.; Semenov, M.A.; Wallach, D.; Wang, E.; Alderman, P.D.; Kassie, B.T.; Biernath, C.; Basso, B.; Cammarano, D.; Challinor, A.J.; Doltra, J.; Dumont, B.; Rezaei, E.E.; Gayler, S.; Kersebaum, K.C.; Kimball, B.A.; Koehler, A.-K.; Liu, B.; O’Leary, G.J.; Olesen, J.E.; Ottman, M.J.; Priesack, E.; Reynolds, M.; Stratonovitch, P.; Streck, T.; Thorburn, P.J.; Waha, K.; Wall, G.W.; White, J.W.; Zhao, Z.; Zhu, Y. |
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Title |
Crop model improvement reduces the uncertainty of the response to temperature of multi-model ensembles |
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Journal Article |
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Year |
2016 |
Publication |
Field Crops Research |
Abbreviated Journal |
Field Crops Research |
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202 |
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5-20 |
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Keywords |
Impact uncertainty; High temperature; Model improvement; Multi-model ensemble; Wheat crop model |
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To improve climate change impact estimates and to quantify their uncertainty, multi-model ensembles (MMEs) have been suggested. Model improvements can improve the accuracy of simulations and reduce the uncertainty of climate change impact assessments. Furthermore, they can reduce the number of models needed in a MME. Herein, 15 wheat growth models of a larger MME were improved through re-parameterization and/or incorporating or modifying heat stress effects on phenology, leaf growth and senescence, biomass growth, and grain number and size using detailed field experimental data from the USDA Hot Serial Cereal experiment (calibration data set). Simulation results from before and after model improvement were then evaluated with independent field experiments from a CIMMYT world-wide field trial network (evaluation data set). Model improvements decreased the variation (10th to 90th model ensemble percentile range) of grain yields simulated by the MME on average by 39% in the calibration data set and by 26% in the independent evaluation data set for crops grown in mean seasonal temperatures >24 °C. MME mean squared error in simulating grain yield decreased by 37%. A reduction in MME uncertainty range by 27% increased MME prediction skills by 47%. Results suggest that the mean level of variation observed in field experiments and used as a benchmark can be reached with half the number of models in the MME. Improving crop models is therefore important to increase the certainty of model-based impact assessments and allow more practical, i.e. smaller MMEs to be used effectively. |
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2016-09-13 |
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Newsletter July 2016 |
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0378-4290 |
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CropM |
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CropMwp;wos; ft=macsur; wsnot_yet; |
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MA @ admin @ |
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4776 |
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Ewert, F.; Boote, K.J.; Rötter, R.P.; Thorburn, P.; Nendel, C. (eds) |
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Crop modelling for agriculture and food security under global change. Abstracts. International Crop Modelling Symposium iCROPM2016, 15-17 March 2016, Berlin, Germany |
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2016 |
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CropM; MACSUR_ACK |
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Berlin |
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Ewert, F.; Boote, K.J.; Rötter, R.P.; Thorburn, P.; Nendel, C. |
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MA @ admin @ |
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2428 |
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Wallach, D.; Thorburn, P.; Asseng, S.; Challinor, A.J.; Ewert, F.; Jones, J.W.; Rötter, R.; Ruane, A. |
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Overview paper on comprehensive framework for assessment of error and uncertainty in crop model predictions |
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Report |
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2016 |
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FACCE MACSUR Reports |
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8 |
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C4.1-D |
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MACSUR_ACK; CropM |
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Crop models are important tools for impact assessment of climate change, as well as for exploring management options under current climate. It is essential to evaluate the uncertainty associated with predictions of these models. Several ways of quantifying prediction uncertainty have been explored in the literature, but there have been no studies of how the different approaches are related to one another, and how they are related to some overall measure of prediction uncertainty. Here we show that all the different approaches can be related to two different viewpoints about the model; either the model is treated as a fixed predictor with some average error, or the model can be treated as a random variable with uncertainty in one or more of model structure, model inputs and model parameters. We discuss the differences, and show how mean squared error of prediction can be estimated in both cases. The results can be used to put uncertainty estimates into a more general framework and to relate different uncertainty estimates to one another and to overall prediction uncertainty. This should lead to a better understanding of crop model prediction uncertainty and the underlying causes of that uncertainty. This study was published as (Wallach et al. 2016) |
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MA @ office @ |
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2954 |
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Nendel, C.; Thorburn, P.; Melzer, D.; Cerri, C.E.P.; Claessens, L.; Aggarwal, P.K.; Adam, M.; Angulo, C.; Asseng, S.; Baron, C.; Basso, B.; Bassu, S.; Bertuzzi, P.; Biernath, C.; Boogaard, H.; Boote, K.J.; Brisson, N.; Cammarano, D.; Conijn, S.; Corbeels, M.; Deryng, D.; Sanctis, G.D.; Doltra, J.; Durand, J.L.; Ewert, F.; Gayler, S.; Goldberg, R.; Grant, R.; Grassini, P.; Heng, L.; Hoek, S.B.; Hooker, J.A.U.-, L.A.H.; Ingwersen, J.; Izaurralde, C.; Jongschaap, R.; Kemanian, A.; Kersebaum, K.C.; Lizaso, J.; Makowski, D.; Martre, P.; Müller, C.; Kim, S.H.; Kumar, S.N.; O’Leary, G.; Olesen, J.E.; Osborne, T.; Palosuo, T.; Pravia, M.V.; Priesack, E.; Ripoche, D.A.U.-, R.P.R.; Sau, F.; Semenov, M.A.; Shcherbak, I.; Steduto, P.; Stöckle, C.; Stratonovitch, P.; Streck, T.; Supit, I.; Tao, F.L.; Teixeira, E.; Timlin, D.; Travasso, M.; Waha, K.; Wallach, D.; White, J.W.; Wolf, J. |
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Soil nitrogen mineralisation simulated by crop models across different environments and the consequences for model improvement |
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2016 |
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Berlin (Germany) |
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International Crop Modelling Symposium iCROPM 2016, 2016-05-15 to 2016-05-17, Berlin, Germany |
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MA @ admin @ |
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4903 |
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