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Author (down) Mansouri, M.; Dumont, B.; Leemans, V.; Destain, M.-F.
Title Bayesian methods for predicting LAI and soil water content Type Journal Article
Year 2014 Publication Precision Agriculture Abbreviated Journal Precision Agric.
Volume 15 Issue 2 Pages 184-201
Keywords crop model; bayes; data assimilation; extended kalman filtering; particle filtering; variational filtering; leaf-area index; parameter-estimation; crop models; moisture; instruments; management; sensors; state
Abstract LAI of winter wheat (Triticum aestivum L.) and soil water content of the topsoil (200 mm) and of the subsoil (500 mm) were considered as state variables of a dynamic soil-crop system. This system was assumed to progress according to a Bayesian probabilistic state space model, in which real values of LAI and soil water content were daily introduced in order to correct the model trajectory and reach better future evolution. The chosen crop model was mini STICS which can reduce the computing and execution times while ensuring the robustness of data processing and estimation. To predict simultaneously state variables and model parameters in this non-linear environment, three techniques were used: extended Kalman filtering (EKF), particle filtering (PF), and variational filtering (VF). The significantly improved performance of the VF method when compared to EKF and PF is demonstrated. The variational filter has a low computational complexity and the convergence speed of states and parameters estimation can be adjusted independently. Detailed case studies demonstrated that the root mean square error of the three estimated states (LAI and soil water content of two soil layers) was smaller and that the convergence of all considered parameters was ensured when using VF. Assimilating measurements in a crop model allows accurate prediction of LAI and soil water content at a local scale. As these biophysical properties are key parameters in the crop-plant system characterization, the system has the potential to be used in precision farming to aid farmers and decision makers in developing strategies for site-specific management of inputs, such as fertilizers and water irrigation.
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ISSN 1385-2256 ISBN Medium Article
Area Expedition Conference
Notes CropM, ftnotmacsur Approved no
Call Number MA @ admin @ Serial 4629
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Author (down) Mansouri, M.; Dumont, B.; Destain, M.-F.
Title Predicting Grain Protein Content of Winter Wheat Type Conference Article
Year 2014 Publication Abbreviated Journal
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Area Expedition Conference 22nd European Symposium on Artificial Networks, Computational Intelligence and Machine Learning. Bruges, Belgium, 2014-04-23 to 2014-04-25
Notes Approved no
Call Number MA @ admin @ Serial 2631
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Author (down) Mansouri, M.; Dumont, B.; Destain, M.-F.
Title Bayesian methods for predicting and modelling winter wheat biomass Type Conference Article
Year 2014 Publication Abbreviated Journal
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Area Expedition Conference MACSUR CropM International Symposium and Workshop: Modelling climate change impacts on crop production for food security, Oslo, Norway, 2014-02-10 to 2014-02-12
Notes Approved no
Call Number MA @ admin @ Serial 2629
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Author (down) Mansouri, M.; Dumont, B.; Destain, M.-F.
Title Bayesian methods for predicting LAI and soil moisture Type Conference Article
Year 2012 Publication Abbreviated Journal
Volume Issue Pages
Keywords CropM
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Area Expedition Conference 11th International Conference on Precision Agriculture. Indianapolis (USA), 2012-07-15 to 2012-07-18
Notes Approved no
Call Number MA @ admin @ Serial 2627
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Author (down) Mansouri, M.; Dumont, B.; Destain, M.-F.
Title Modeling and prediction of nonlinear environmental system using Bayesian methods Type Journal Article
Year 2013 Publication Computers and Electronics in Agriculture Abbreviated Journal Computers and Electronics in Agriculture
Volume 92 Issue Pages 16-31
Keywords state and parameter estimation; variational filter; particle filter; extended kalman filter; nonlinear environmental system; leaf area index and soil moisture model; extended kalman filter; state-space models; parameter-estimation; particle filters; navigation; tutorial; tracking
Abstract An environmental dynamic system is usually modeled as a nonlinear system described by a set of nonlinear ODEs. A central challenge in computational modeling of environmental systems is the determination of the model parameters. In these cases, estimating these variables or parameters from other easily obtained measurements can be extremely useful. This work addresses the problem of monitoring and modeling a leaf area index and soil moisture model (LSM) using state estimation. The performances of various conventional and state-of-the-art state estimation techniques are compared when they are utilized to achieve this objective. These techniques include the extended Kalman filter (EKF), particle filter (PF), and the more recently developed technique variational filter (VF). Specifically, two comparative studies are performed. In the first comparative study, the state variables (the leaf-area index LAI, the volumetric water content of the soil layer 1, HUR1 and the volumetric water content of the soil layer 2, HUR2) are estimated from noisy measurements of these variables, and the various estimation techniques are compared by computing the estimation root mean square error (RMSE) with respect to the noise-free data. In the second comparative study, the state variables as well as the model parameters are simultaneously estimated. In this case, in addition to comparing the performances of the various state estimation techniques, the effect of number of estimated model parameters on the accuracy and convergence of these techniques are also assessed. The results of both comparative studies show that the PF provides a higher accuracy than the EKF, which is due to the limited ability of the EKF to handle highly nonlinear processes. The results also show that the VF provides a significant improvement over the PF because, unlike the PF which depends on the choice of sampling distribution used to estimate the posterior distribution, the VF yields an optimum choice of the sampling distribution, which also accounts for the observed data. The results of the second comparative study show that, for all techniques, estimating more model parameters affects the estimation accuracy as well as the convergence of the estimated states and parameters. However, the VF can still provide both convergence as well as accuracy related advantages over other estimation methods. (C) 2013 Elsevier B.V. All rights reserved.
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Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0168-1699 ISBN Medium Article
Area Expedition Conference
Notes CropM Approved no
Call Number MA @ admin @ Serial 4495
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