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Author Rodriguez, A.; Ruiz-Ramos, M.; Palosuo, T.; Carter, T.R.; Fronzek, S.; Lorite, I.J.; Ferrise, R.; Pirttioja, N.; Bindi, M.; Baranowski, P.; Buis, S.; Cammarano, D.; Chen, Y.; Dumont, B.; Ewert, F.; Gaiser, T.; Hlavinka, P.; Hoffmann, H.; Hohn, J.G.; Jurecka, F.; Kersebaum, K.C.; Krzyszczak, J.; Lana, M.; Mechiche-Alami, A.; Minet, J.; Montesino, M.; Nendel, C.; Porter, J.R.; Ruget, F.; Semenov, M.A.; Steinmetz, Z.; Stratonovitch, P.; Supit, I.; Tao, F.; Trnka, M.; de Wit, A.; Roetter, R.P. doi  openurl
  Title (up) Implications of crop model ensemble size and composition for estimates of adaptation effects and agreement of recommendations Type Journal Article
  Year 2019 Publication Agricultural and Forest Meteorology Abbreviated Journal Agricultural and Forest Meteorology  
  Volume 264 Issue Pages 351-362  
  Keywords Wheat adaptation; Uncertainty; Climate change; Decision support; Response surface; Outcome confidence; Climate-Change Impacts; Response Surfaces; Wheat; Uncertainty; Yield; Simulation; 21St-Century; Productivity; Temperature; Projections  
  Abstract unless local adaptation can ameliorate these impacts. Ensembles of crop simulation models can be useful tools for assessing if proposed adaptation options are capable of achieving target yields, whilst also quantifying the share of uncertainty in the simulated crop impact resulting from the crop models themselves. Although some studies have analysed the influence of ensemble size on model outcomes, the effect of ensemble composition has not yet been properly appraised. Moreover, results and derived recommendations typically rely on averaged ensemble simulation results without accounting sufficiently for the spread of model outcomes. Therefore, we developed an Ensemble Outcome Agreement (EOA) index, which analyses the effect of changes in composition and size of a multi-model ensemble (MME) to evaluate the level of agreement between MME outcomes with respect to a given hypothesis (e.g. that adaptation measures result in positive crop responses). We analysed the recommendations of a previous study performed with an ensemble of 17 crop models and testing 54 adaptation options for rainfed winter wheat (Triticum aestivwn L.) at Lleida (NE Spain) under perturbed conditions of temperature, precipitation and atmospheric CO2 concentration. Our results confirmed that most adaptations recommended in the previous study have a positive effect. However, we also showed that some options did not remain recommendable in specific conditions if different ensembles were considered. Using EOA, we were able to identify the adaptation options for which there is high confidence in their effectiveness at enhancing yields, even under severe climate perturbations. These include substituting spring wheat for winter wheat combined with earlier sowing dates and standard or longer duration cultivars, or introducing supplementary irrigation, the latter increasing EOA values in all cases. There is low confidence in recovering yields to baseline levels, although this target could be attained for some adaptation options under moderate climate perturbations. Recommendations derived from such robust results may provide crucial information for stakeholders seeking to implement adaptation measures.  
  Address 2019-01-07  
  Corporate Author Thesis  
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  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0168-1923 ISBN Medium  
  Area Expedition Conference  
  Notes CropM, ft_macsur Approved no  
  Call Number MA @ admin @ Serial 5214  
Permanent link to this record
 

 
Author Mansouri, M.; Dumont, B.; Destain, M.-F. url  doi
openurl 
  Title (up) Modeling and prediction of nonlinear environmental system using Bayesian methods Type Journal Article
  Year 2013 Publication Computers and Electronics in Agriculture Abbreviated Journal Computers and Electronics in Agriculture  
  Volume 92 Issue Pages 16-31  
  Keywords state and parameter estimation; variational filter; particle filter; extended kalman filter; nonlinear environmental system; leaf area index and soil moisture model; extended kalman filter; state-space models; parameter-estimation; particle filters; navigation; tutorial; tracking  
  Abstract An environmental dynamic system is usually modeled as a nonlinear system described by a set of nonlinear ODEs. A central challenge in computational modeling of environmental systems is the determination of the model parameters. In these cases, estimating these variables or parameters from other easily obtained measurements can be extremely useful. This work addresses the problem of monitoring and modeling a leaf area index and soil moisture model (LSM) using state estimation. The performances of various conventional and state-of-the-art state estimation techniques are compared when they are utilized to achieve this objective. These techniques include the extended Kalman filter (EKF), particle filter (PF), and the more recently developed technique variational filter (VF). Specifically, two comparative studies are performed. In the first comparative study, the state variables (the leaf-area index LAI, the volumetric water content of the soil layer 1, HUR1 and the volumetric water content of the soil layer 2, HUR2) are estimated from noisy measurements of these variables, and the various estimation techniques are compared by computing the estimation root mean square error (RMSE) with respect to the noise-free data. In the second comparative study, the state variables as well as the model parameters are simultaneously estimated. In this case, in addition to comparing the performances of the various state estimation techniques, the effect of number of estimated model parameters on the accuracy and convergence of these techniques are also assessed. The results of both comparative studies show that the PF provides a higher accuracy than the EKF, which is due to the limited ability of the EKF to handle highly nonlinear processes. The results also show that the VF provides a significant improvement over the PF because, unlike the PF which depends on the choice of sampling distribution used to estimate the posterior distribution, the VF yields an optimum choice of the sampling distribution, which also accounts for the observed data. The results of the second comparative study show that, for all techniques, estimating more model parameters affects the estimation accuracy as well as the convergence of the estimated states and parameters. However, the VF can still provide both convergence as well as accuracy related advantages over other estimation methods. (C) 2013 Elsevier B.V. All rights reserved.  
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  Language English Summary Language Original Title  
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  Series Volume Series Issue Edition  
  ISSN 0168-1699 ISBN Medium Article  
  Area Expedition Conference  
  Notes CropM Approved no  
  Call Number MA @ admin @ Serial 4495  
Permanent link to this record
 

 
Author Dumont, B.; Leemans, V.; Mansouri, M.; Bodson, B.; Destain, J.-P.; Destain, M.-F. url  doi
openurl 
  Title (up) Parameter identification of the STICS crop model, using an accelerated formal MCMC approach Type Journal Article
  Year 2014 Publication Environmental Modelling & Software Abbreviated Journal Env. Model. Softw.  
  Volume 52 Issue Pages 121-135  
  Keywords crop model; parameter estimation; bayes; stics; dream; global sensitivity-analysis; simulation-model; nitrogen balances; bayesian-approach; generic model; wheat; prediction; water; optimization; algorithm  
  Abstract This study presents a Bayesian approach for the parameters’ identification of the STICS crop model based on the recently developed Differential Evolution Adaptive Metropolis (DREAM) algorithm. The posterior distributions of nine specific crop parameters of the STICS model were sampled with the aim to improve the growth simulations of a winter wheat (Triticum aestivum L) culture. The results obtained with the DREAM algorithm were initially compared to those obtained with a Nelder-Mead Simplex algorithm embedded within the OptimiSTICS package. Then, three types of likelihood functions implemented within the DREAM algorithm were compared, namely the standard least square, the weighted least square, and a transformed likelihood function that makes explicit use of the coefficient of variation (CV). The results showed that the proposed CV likelihood function allowed taking into account both noise on measurements and heteroscedasticity which are regularly encountered in crop modelling. (C) 2013 Elsevier Ltd. All rights reserved.  
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  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 1364-8152 ISBN Medium Article  
  Area Expedition Conference  
  Notes CropM Approved no  
  Call Number MA @ admin @ Serial 4520  
Permanent link to this record
 

 
Author Mansouri, M.; Dumont, B.; Destain, M.-F. url  openurl
  Title (up) Predicting Grain Protein Content of Winter Wheat Type Conference Article
  Year 2014 Publication Abbreviated Journal  
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  Area Expedition Conference 22nd European Symposium on Artificial Networks, Computational Intelligence and Machine Learning. Bruges, Belgium, 2014-04-23 to 2014-04-25  
  Notes Approved no  
  Call Number MA @ admin @ Serial 2631  
Permanent link to this record
 

 
Author Dumont, B.; Vancutsem, F.; Seutin, B.; Bodson, B.; Destain, J.-P.; Destain, M.-F. url  openurl
  Title (up) Simulation de la croissance du blé à l’aide de modèles écophysiologiques: Synthèse bibliographique des méthodes, potentialités et limitations Type Journal Article
  Year 2012 Publication Biotechnologie, Agronomie, Société et Environnement Abbreviated Journal Biotechnologie, Agronomie, Société et Environnement  
  Volume 163 Issue Pages 376-386  
  Keywords crops; growth; soil; Triticum; wheats; calibration; optimization methods  
  Abstract Crop models describe the growth and development of a crop interacting with its surrounding agro-environmental conditions (soil, climate and the close conditions of the plant). However, the implementation of such models remains difficult because of the high number of explanatory variables and parameters. It often happens that important discrepancies appear between measured and simulated values. This article aims to highlight the different sources of uncertainty related to the use of crop models, as well as the actual methods that allow a compensation for or, at least, a consideration of these sources of error during analysis of the model results. This article presents a literature review, which firstly synthesises the general mathematical structure of crop models. The main criteria for evaluating crop models are then described. Finally, several methods used for improving models are given. Parameter estimation methods, including frequentist and Bayesian approaches, are presented and data assimilation methods are reviewed.  
  Address  
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  Language French Summary Language Original Title  
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  Series Volume Series Issue Edition  
  ISSN ISBN Medium Article  
  Area Expedition Conference  
  Notes CropM, ftnotmacsur Approved no  
  Call Number MA @ admin @ Serial 4584  
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