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Fronzek, S.; Pirttioja, N.; Carter, T.R.; Bindi, M.; Hoffmann, H.; Palosuo, T.; Ruiz-Ramos, M.; Tao, F.; Trnka, M.; Acutis, M.; Asseng, S.; Baranowski, P.; Basso, B.; Bodin, P.; Buis, S.; Cammarano, D.; Deligios, P.; Destain, M.-F.; Dumont, B.; Ewert, F.; Ferrise, R.; Francois, L.; Gaiser, T.; Hlavinka, P.; Jacquemin, I.; Kersebaum, K.C.; Kollas, C.; Krzyszczaki, J.; Lorite, I.J.; Minet, J.; Ines Minguez, M.; Montesino, M.; Moriondo, M.; Mueller, C.; Nendel, C.; Ozturk, I.; Perego, A.; Rodriguez, A.; Ruane, A.C.; Ruget, F.; Sanna, M.; Semenov, M.A.; Slawinski, C.; Stratonovitch, P.; Supit, I.; Waha, K.; Wang, E.; Wu, L.; Zhao, Z.; Rotter, R.P. |
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Title |
Classifying multi-model wheat yield impact response surfaces showing sensitivity to temperature and precipitation change |
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Journal Article |
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Year |
2018 |
Publication |
Agricultural Systems |
Abbreviated Journal |
Agric. Syst. |
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Volume |
159 |
Issue |
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Pages |
209-224 |
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Keywords  |
Classification; Climate change; Crop model; Ensemble; Sensitivity analysis; Wheat; Climate-Change; Crop Models; Probabilistic Assessment; Simulating; Impacts; British Catchments; Uncertainty; Europe; Productivity; Calibration; Adaptation |
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Abstract |
Crop growth simulation models can differ greatly in their treatment of key processes and hence in their response to environmental conditions. Here, we used an ensemble of 26 process-based wheat models applied at sites across a European transect to compare their sensitivity to changes in temperature (-2 to +9 degrees C) and precipitation (-50 to +50%). Model results were analysed by plotting them as impact response surfaces (IRSs), classifying the IRS patterns of individual model simulations, describing these classes and analysing factors that may explain the major differences in model responses. The model ensemble was used to simulate yields of winter and spring wheat at four sites in Finland, Germany and Spain. Results were plotted as IRSs that show changes in yields relative to the baseline with respect to temperature and precipitation. IRSs of 30-year means and selected extreme years were classified using two approaches describing their pattern. The expert diagnostic approach (EDA) combines two aspects of IRS patterns: location of the maximum yield (nine classes) and strength of the yield response with respect to climate (four classes), resulting in a total of 36 combined classes defined using criteria pre-specified by experts. The statistical diagnostic approach (SDA) groups IRSs by comparing their pattern and magnitude, without attempting to interpret these features. It applies a hierarchical clustering method, grouping response patterns using a distance metric that combines the spatial correlation and Euclidian distance between IRS pairs. The two approaches were used to investigate whether different patterns of yield response could be related to different properties of the crop models, specifically their genealogy, calibration and process description. Although no single model property across a large model ensemble was found to explain the integrated yield response to temperature and precipitation perturbations, the application of the EDA and SDA approaches revealed their capability to distinguish: (i) stronger yield responses to precipitation for winter wheat than spring wheat; (ii) differing strengths of response to climate changes for years with anomalous weather conditions compared to period-average conditions; (iii) the influence of site conditions on yield patterns; (iv) similarities in IRS patterns among models with related genealogy; (v) similarities in IRS patterns for models with simpler process descriptions of root growth and water uptake compared to those with more complex descriptions; and (vi) a closer correspondence of IRS patterns in models using partitioning schemes to represent yield formation than in those using a harvest index. Such results can inform future crop modelling studies that seek to exploit the diversity of multi-model ensembles, by distinguishing ensemble members that span a wide range of responses as well as those that display implausible behaviour or strong mutual similarities. |
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2018-01-25 |
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0308-521x |
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CropM, ft_macsur |
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MA @ admin @ |
Serial |
5186 |
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Author |
Pirttioja, N.; Carter, T.R.; Fronzek, S.; Bindi, M.; Hoffmann, H.; Palosuo, T.; Ruiz-Ramos, M.; Tao, F.; Trnka, M.; Acutis, M.; Asseng, S.; Baranowski, P.; Basso, B.; Bodin, P.; Buis, S.; Cammarano, D.; Deligios, P.; Destain, M.F.; Dumont, B.; Ewert, F.; Ferrise, R.; François, L.; Gaiser, T.; Hlavinka, P.; Jacquemin, I.; Kersebaum, K.C.; Kollas, C.; Krzyszczak, J.; Lorite, I.J.; Minet, J.; Minguez, M.I.; Montesino-San Martin, M.; Moriondo, M.; Müller, C.; Nendel, C.; Öztürk, I.; Perego, A.; Rodríguez, A.; Ruane, A.C.; Ruget, F.; Sanna, M.; Semenov, M.A.; Slawinski, C.; Stratonovitch, P.; Supit, I.; Waha, K.; Wang, E.; Wu, L.; Zhao, Z.; Rötter, R.P. |
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Title |
Temperature and precipitation effects on wheat yield across a European transect: a crop model ensemble analysis using impact response surfaces |
Type |
Journal Article |
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Year |
2015 |
Publication |
Climate Research |
Abbreviated Journal |
Clim. Res. |
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Volume |
65 |
Issue |
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Pages |
87-105 |
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Keywords |
climate; crop model; impact response surface; IRS; sensitivity analysis; wheat; yield; climate-change impacts; uncertainty; 21st-century; projections; simulation; growth; region |
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Abstract |
This study explored the utility of the impact response surface (IRS) approach for investigating model ensemble crop yield responses under a large range of changes in climate. IRSs of spring and winter wheat Triticum aestivum yields were constructed from a 26-member ensemble of process-based crop simulation models for sites in Finland, Germany and Spain across a latitudinal transect. The sensitivity of modelled yield to systematic increments of changes in temperature (-2 to +9°C) and precipitation (-50 to +50%) was tested by modifying values of baseline (1981 to 2010) daily weather, with CO2 concentration fixed at 360 ppm. The IRS approach offers an effective method of portraying model behaviour under changing climate as well as advantages for analysing, comparing and presenting results from multi-model ensemble simulations. Though individual model behaviour occasionally departed markedly from the average, ensemble median responses across sites and crop varieties indicated that yields decline with higher temperatures and decreased precipitation and increase with higher precipitation. Across the uncertainty ranges defined for the IRSs, yields were more sensitive to temperature than precipitation changes at the Finnish site while sensitivities were mixed at the German and Spanish sites. Precipitation effects diminished under higher temperature changes. While the bivariate and multi-model characteristics of the analysis impose some limits to interpretation, the IRS approach nonetheless provides additional insights into sensitivities to inter-model and inter-annual variability. Taken together, these sensitivities may help to pinpoint processes such as heat stress, vernalisation or drought effects requiring refinement in future model development. |
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0936-577x 1616-1572 |
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CropM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
4662 |
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Dumont, B.; Basso, B.; Bodson, B.; Destain, J.-P.; Destain, M.-F. |
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Title |
Climatic risk assessment to improve nitrogen fertilisation recommendations: A strategic crop model-based approach |
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Journal Article |
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Year |
2015 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
European Journal of Agronomy |
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65 |
Issue |
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Pages |
10-17 |
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Keywords |
climatic variability; stochastically generated weather; lars-wg; crop model; stics; nitrogen management; yield skewness; wheat yield; generic model; stics; management; variability; simulation; field; balances; impact |
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Within the context of nitrogen (N) management, since 1950, with the rapid intensification of agriculture, farmers have often applied much larger fertiliser quantities than what was required to reach the yield potential. However, to prevent pollution of surface and groundwater induced by nitrates, The European Community launched The European Nitrates Directive 91/6/76/EEC. In 2002, in Wallonia (Belgium), the Nitrates Directive has been transposed under the Sustainable Nitrogen Management in Agriculture Program (PGDA), with the aim of maintaining productivity and revenue for the country’s farmers, while reducing the environmental impact of excessive N application. A feasible approach for addressing climatic uncertainty lies in the use of crop models such as the one commonly known as STICS (simulateur multidisciplinaire pour les cultures standard). These models allow the impact on crops of the interaction between cropping systems and climatic records to be assessed. Comprehensive historical climatic records are rare, however, and therefore the yield distribution values obtained using such an approach can be discontinuous. In order to obtain better and more detailed yield distribution information, the use of a high number of stochastically generated climate time series was proposed, relying on the LARS-Weather Generator. The study focused on the interactions between varying N practices and climatic conditions. Historically and currently, Belgian farmers apply 180 kg N ha(-1), split into three equal fractions applied at the tillering, stem elongation and flag-leaf stages. This study analysed the effectiveness of this treatment in detail, comparing it to similar practices where only the N rates applied at the flag-leaf stage were modified. Three types of farmer decision-making were analysed. The first related to the choice of N strategy for maximising yield, the second to obtaining the highest net revenue, and the third to reduce the environmental impact of potential N leaching, which carries the likelihood of taxation if inappropriate N rates are applied. The results showed reduced discontinuity in the yield distribution values thus obtained. In general, the modulation of N levels to accord with current farmer practices showed considerable asymmetry. In other words, these practices maximised the probability of achieving yields that were at least superior to the mean of the distribution values, thus reducing risk for the farmers. The practice based on applying the highest amounts (60-60-100 kg N ha(-1)) produced the best yield distribution results. When simple economical criteria were computed, the 60-60-80 kg N ha(-1) protocol was found to be optimal for 80-90% of the time. There were no statistical differences, however, between this practice and Belgian farmers’ current practice. When the taxation linked to a high level of potentially leachable N remaining in the soil after harvest was considered, this methodology clearly showed that, in 3 years out of 4,30 kg N ha(-1) could systematically be saved in comparison with the usual practice. |
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1161-0301 |
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CropM, ft_macsur |
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MA @ admin @ |
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4646 |
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Author |
Mansouri, M.; Dumont, B.; Leemans, V.; Destain, M.-F. |
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Title |
Bayesian methods for predicting LAI and soil water content |
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Journal Article |
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Year |
2014 |
Publication |
Precision Agriculture |
Abbreviated Journal |
Precision Agric. |
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15 |
Issue |
2 |
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184-201 |
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Keywords |
crop model; bayes; data assimilation; extended kalman filtering; particle filtering; variational filtering; leaf-area index; parameter-estimation; crop models; moisture; instruments; management; sensors; state |
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Abstract |
LAI of winter wheat (Triticum aestivum L.) and soil water content of the topsoil (200 mm) and of the subsoil (500 mm) were considered as state variables of a dynamic soil-crop system. This system was assumed to progress according to a Bayesian probabilistic state space model, in which real values of LAI and soil water content were daily introduced in order to correct the model trajectory and reach better future evolution. The chosen crop model was mini STICS which can reduce the computing and execution times while ensuring the robustness of data processing and estimation. To predict simultaneously state variables and model parameters in this non-linear environment, three techniques were used: extended Kalman filtering (EKF), particle filtering (PF), and variational filtering (VF). The significantly improved performance of the VF method when compared to EKF and PF is demonstrated. The variational filter has a low computational complexity and the convergence speed of states and parameters estimation can be adjusted independently. Detailed case studies demonstrated that the root mean square error of the three estimated states (LAI and soil water content of two soil layers) was smaller and that the convergence of all considered parameters was ensured when using VF. Assimilating measurements in a crop model allows accurate prediction of LAI and soil water content at a local scale. As these biophysical properties are key parameters in the crop-plant system characterization, the system has the potential to be used in precision farming to aid farmers and decision makers in developing strategies for site-specific management of inputs, such as fertilizers and water irrigation. |
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1385-2256 |
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CropM, ftnotmacsur |
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MA @ admin @ |
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4629 |
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Dumont, B.; Leemans, V.; Mansouri, M.; Bodson, B.; Destain, J.-P.; Destain, M.-F. |
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Title |
Parameter identification of the STICS crop model, using an accelerated formal MCMC approach |
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Journal Article |
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Year |
2014 |
Publication |
Environmental Modelling & Software |
Abbreviated Journal |
Env. Model. Softw. |
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Volume |
52 |
Issue |
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121-135 |
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Keywords |
crop model; parameter estimation; bayes; stics; dream; global sensitivity-analysis; simulation-model; nitrogen balances; bayesian-approach; generic model; wheat; prediction; water; optimization; algorithm |
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This study presents a Bayesian approach for the parameters’ identification of the STICS crop model based on the recently developed Differential Evolution Adaptive Metropolis (DREAM) algorithm. The posterior distributions of nine specific crop parameters of the STICS model were sampled with the aim to improve the growth simulations of a winter wheat (Triticum aestivum L) culture. The results obtained with the DREAM algorithm were initially compared to those obtained with a Nelder-Mead Simplex algorithm embedded within the OptimiSTICS package. Then, three types of likelihood functions implemented within the DREAM algorithm were compared, namely the standard least square, the weighted least square, and a transformed likelihood function that makes explicit use of the coefficient of variation (CV). The results showed that the proposed CV likelihood function allowed taking into account both noise on measurements and heteroscedasticity which are regularly encountered in crop modelling. (C) 2013 Elsevier Ltd. All rights reserved. |
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1364-8152 |
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CropM |
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MA @ admin @ |
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4520 |
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