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Author |
Wallach, D.; Nissanka, S.P.; Karunaratne, A.S.; Weerakoon, W.M.W.; Thorburn, P.J.; Boote, K.J.; Jones, J.W. |
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Title |
Accounting for both parameter and model structure uncertainty in crop model predictions of phenology: A case study on rice |
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Journal Article |
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Year |
2016 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
European Journal of Agronomy |
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Keywords |
Uncertainty; Phenology; Parameter uncertainty; Multi-model ensemble; Generalized least squares; Rice; Crop model; APSIM; DSSAT |
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Abstract |
We consider predictions of the impact of climate warming on rice development times in Sri Lanka. The major emphasis is on the uncertainty of the predictions, and in particular on the estimation of mean squared error of prediction. Three contributions to mean squared error are considered. The first is parameter uncertainty that results from model calibration. To take proper account of the complex data structure, generalized least squares is used to estimate the parameters and the variance-covariance matrix of the parameter estimators. The second contribution is model structure uncertainty, which we estimate using two different models. An ANOVA analysis is used to separate the contributions of parameter and model uncertainty to mean squared error. The third contribution is model error, which is estimated using hindcasts. Mean squared error of prediction of time from emergence to maturity, for baseline +2 °C, is estimated as 108 days2, with model error contributing 86 days2, followed by model structure uncertainty which contributes 15 days2 and parameter uncertainty which contributes 7 days2. We also show how prediction uncertainty is reduced if prediction concerns development time averaged over years, or the difference in development time between baseline and warmer temperatures. |
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2016-09-13 |
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1161-0301 |
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Article |
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CropM |
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CropM; wos; ftnotmacsur; wsnotyet; |
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MA @ admin @ |
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4777 |
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Author |
Ewert, F.; Boote, K.J.; Rötter, R.P.; Thorburn, P.; Nendel, C. (eds) |
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Crop modelling for agriculture and food security under global change. Abstracts. International Crop Modelling Symposium iCROPM2016, 15-17 March 2016, Berlin, Germany |
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Book Whole |
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2016 |
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CropM; MACSUR_ACK |
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Berlin |
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Ewert, F.; Boote, K.J.; Rötter, R.P.; Thorburn, P.; Nendel, C. |
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MA @ admin @ |
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2428 |
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Nendel, C.; Thorburn, P.; Melzer, D.; Cerri, C.E.P.; Claessens, L.; Aggarwal, P.K.; Adam, M.; Angulo, C.; Asseng, S.; Baron, C.; Basso, B.; Bassu, S.; Bertuzzi, P.; Biernath, C.; Boogaard, H.; Boote, K.J.; Brisson, N.; Cammarano, D.; Conijn, S.; Corbeels, M.; Deryng, D.; Sanctis, G.D.; Doltra, J.; Durand, J.L.; Ewert, F.; Gayler, S.; Goldberg, R.; Grant, R.; Grassini, P.; Heng, L.; Hoek, S.B.; Hooker, J.A.U.-, L.A.H.; Ingwersen, J.; Izaurralde, C.; Jongschaap, R.; Kemanian, A.; Kersebaum, K.C.; Lizaso, J.; Makowski, D.; Martre, P.; Müller, C.; Kim, S.H.; Kumar, S.N.; O’Leary, G.; Olesen, J.E.; Osborne, T.; Palosuo, T.; Pravia, M.V.; Priesack, E.; Ripoche, D.A.U.-, R.P.R.; Sau, F.; Semenov, M.A.; Shcherbak, I.; Steduto, P.; Stöckle, C.; Stratonovitch, P.; Streck, T.; Supit, I.; Tao, F.L.; Teixeira, E.; Timlin, D.; Travasso, M.; Waha, K.; Wallach, D.; White, J.W.; Wolf, J. |
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Soil nitrogen mineralisation simulated by crop models across different environments and the consequences for model improvement |
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Conference Article |
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2016 |
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Berlin (Germany) |
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International Crop Modelling Symposium iCROPM 2016, 2016-05-15 to 2016-05-17, Berlin, Germany |
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MA @ admin @ |
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4903 |
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Author |
Boote, K.J.; Porter, C.; Jones, J.W.; Thorburn, P.J.; Kersebaum, K.C.; Hoogenboom, G.; White, J.W.; Hatfield, J.L. |
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Title |
Sentinel site data for crop model improvement—definition and characterization |
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Book Chapter |
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Year |
2016 |
Publication |
Improving Modeling Tools to Assess Climate Change Effects on Crop Response |
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Crop models are increasingly being used to assess the impacts of future climate change on production and food security. High quality, site-specific data on weather, soils, management, and cultivar are needed for those model applications. Also important is that model development, evaluation, improvement, and calibration require additional high quality, site-specific measurements on crop yield, growth, phenology, and ancillary traits. We review the evolution of minimum data set requirements for agroecosystem modeling and then describe the characteristics and ranking of sentinel site data needed for crop model improvement, calibration, and application. We in the Agricultural Model Intercomparison and Improvement Project (AgMIP), propose to rank sentinel site data sets as platinum, gold, silver, and copper, based on the degree of true site-specific measurement of weather, soils, management, crop yield, as well as the quality, comprehensiveness, quantity, accuracy, and value. For example, to be ranked platinum, the weather and soil characterization must be measured on-site, and all management inputs must be known. Dataset ranking will be lower for weather measured off-site or soil traits estimated from soil mapping. Ranking also depends on the intended purposes for data use. If the purpose is to improve a crop model for response to water or N, then additional observations are necessary, such as initial soil water, initial soil inorganic N, and plant N uptake during the growing season to be ranked platinum. Rankings are enhanced by presence of multiple treatments and sites. Examples of platinum-, gold-, and silver-quality data sets for model improvement and calibration uses are illustrated. |
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Hatfield, J.L.; Fleisher, D. |
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Advances in Agricultural Systems Modeling |
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7 |
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CropM |
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MA @ admin @ |
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4980 |
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Acharya, T.; Fanzo, J.; Gustafson, D.; Ingram, J.; Schneeman, B.; Allen, L.; Boote, K.; Drewnowski, A.; Ewert, F.; Hall, S.; Hendley, P.; Howden, M.; Janssen, S.; Jones, J.; Latulippe, M.; Lotze-Campen, H.; McDermott, J.; Meijl, H.V.; Nelson, G.; Newsome, R.; Roulin, A.; Scholes, B.; Tanumihardjo, S.; Tavill, G.; van der Mensbrugghe, D.; Wiebe, K. |
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Title |
Assessing Sustainable Nutrition Security: The Role of Food Systems: Working Paper |
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Report |
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2014 |
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ftnotmacsur |
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Washington, D.C., U.S.A. |
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ILSI Research Foundation: Center for Integrated Modeling of Sustainable Agriculture and Nutrition Security |
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TradeM |
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MA @ admin @ |
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4995 |
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