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Makowski, D. (2017). A simple Bayesian method for adjusting ensemble of crop model outputs to yield observations. Europ. J. Agron., 88, 76–83.
Abstract: Multi-model forecasting has drawn some attention in crop science for evaluating effect of climate change on crop yields. The principle is to run several individual process-based crop models under several climate scenarios in order to generate ensembles of output values. This paper describes a simple Bayesian method – called Bayes linear method- for updating ensemble of crop model outputs using yield observations. The principle is to summarize the ensemble of crop model outputs by its mean and variance, and then to adjust these two quantities to yield observations in order to reduce uncertainty. The adjusted mean and variance combine two sources of information, i.e., the ensemble of crop model outputs and the observations. Interestingly, with this method, observations collected under a given climate scenario can be used to adjust mean and variance of the model ensemble under a different scenario. Another advantage of the proposed method is that it does not rely on a separate calibration of each individual crop model. The uncertainty reduction resulting from the adjustment of an ensemble of crop models to observations was assessed in a numerical application. The implementation of the Bayes linear method systematically reduced uncertainty, but the results showed the effectiveness of this method varied in function of several factors, especially the accuracy of the yield observation, and the covariance between the crop model output and the observation. (C) 2015 Elsevier B.V. All rights reserved.
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Ginaldi, F., Bindi, M., Marta, A. D., Ferrise, R., Orlandini, S., & Danuso, F. (2016). Interoperability of agronomic long term experiment databases and crop model intercomparison: the Italian experience. Europ. J. Agron., 77, 209–222.
Abstract: • ICFAR-DB organises and stores data from 16 Italian long term agronomic experiments. • ICFAR-DB fulfils interoperability using system dynamics ontology and AgMIP nomenclature. • ICFAR information management system moves closer data to model and vice versa. The IC-FAR national project (Linking long term observatories with crop system modelling for better understanding of climate change impact, and adaptation strategies for Italian cropping systems) initiated in 2013 with the primary aim of implementing data from 16 long term Italian agronomic experiments in a common, interoperable structure. The building of a common database (DB) structure demands a harmonization process aimed at standardising concepts, language and data in order to make them clear, and has to produce a well-documented and easily available tool for the whole scientific community. The Agricultural Model Intercomparison and Improvement Project (AgMIP) has made a great effort in this sense, improving the vocabulary developed by the International Consortium for Agricultural Systems Applications (ICASA) and defining harmonization procedures. Nowadays, these ones have also to be addressed to facilitate the extraction of input files for crop model simulations. Substantially, two alternative directions can be pursued: adapting data to models, building a standard storage structure and using translators that convert DB information to model input files; or adapting models to data, using the same storage structure for feeding modelling solutions constituted by combining model components, re-implemented in the same model platform. The ICFAR information management system simplifies data entry, improves model input extraction (implementing System Dynamics ontology), and satisfies both the paradigms. This has required the development of different software tools: ICFAR-DB for data entry and storage; a model input extractor for feeding the crop models (MoLInEx); SEMoLa platform for building modelling solutions and performing via scripts the model intercomparison. The use of the standard AgMIP/ICASA nomenclature in the ICFAR-DB and the opportunity to create files with MoLInex for feeding AgMIP model translators allow full system interoperability.
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