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Author |
Martre, P.; He, J.; Le Gouis, J.; Semenov, M.A. |
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Title |
In silico system analysis of physiological traits determining grain yield and protein concentration for wheat as influenced by climate and crop management |
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Journal Article |
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Year  |
2015 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
66 |
Issue |
12 |
Pages |
3581-3598 |
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Keywords |
Climate; *Computer Simulation; Crops, Agricultural/*growth & development/physiology; Edible Grain/*growth & development; Models, Biological; Nitrogen/metabolism; Plant Proteins/*metabolism; Plant Transpiration; Probability; *Quantitative Trait, Heritable; Soil/chemistry; Triticum/growth & development/metabolism/*physiology; Water/chemistry; Crop growth model; genetic adaptation; grain protein concentration; grain yield; interannual variability; sensitivity analysis; wheat (Triticum aestivum L.); yield stability |
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Abstract |
Genetic improvement of grain yield (GY) and grain protein concentration (GPC) is impeded by large genotype×environment×management interactions and by compensatory effects between traits. Here global uncertainty and sensitivity analyses of the process-based wheat model SiriusQuality2 were conducted with the aim of identifying candidate traits to increase GY and GPC. Three contrasted European sites were selected and simulations were performed using long-term weather data and two nitrogen (N) treatments in order to quantify the effect of parameter uncertainty on GY and GPC under variable environments. The overall influence of all 75 plant parameters of SiriusQuality2 was first analysed using the Morris method. Forty-one influential parameters were identified and their individual (first-order) and total effects on the model outputs were investigated using the extended Fourier amplitude sensitivity test. The overall effect of the parameters was dominated by their interactions with other parameters. Under high N supply, a few influential parameters with respect to GY were identified (e.g. radiation use efficiency, potential duration of grain filling, and phyllochron). However, under low N, >10 parameters showed similar effects on GY and GPC. All parameters had opposite effects on GY and GPC, but leaf and stem N storage capacity appeared as good candidate traits to change the intercept of the negative relationship between GY and GPC. This study provides a system analysis of traits determining GY and GPC under variable environments and delivers valuable information to prioritize model development and experimental work. |
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1460-2431 (Electronic) 0022-0957 (Linking) |
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CropM, ftnotmacsur |
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MA @ admin @ |
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4567 |
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Ewert, F.; Rötter, R.P.; Bindi, M.; Webber, H.; Trnka, M.; Kersebaum, K.C.; Olesen, J.E.; van Ittersum, M.K.; Janssen, S.; Rivington, M.; Semenov, M.A.; Wallach, D.; Porter, J.R.; Stewart, D.; Verhagen, J.; Gaiser, T.; Palosuo, T.; Tao, F.; Nendel, C.; Roggero, P.P.; Bartošová, L.; Asseng, S. |
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Title |
Crop modelling for integrated assessment of risk to food production from climate change |
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Journal Article |
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Year |
2015 |
Publication |
Environmental Modelling & Software |
Abbreviated Journal |
Env. Model. Softw. |
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Volume |
72 |
Issue |
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Pages |
287-303 |
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Keywords |
uncertainty; scaling; integrated assessment; risk assessment; adaptation; crop models; agricultural land-use; change adaptation strategies; farming systems simulation; agri-environmental systems; enrichment face experiment; high-temperature stress; change impacts; nitrogen dynamics; atmospheric co2; spring wheat |
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The complexity of risks posed by climate change and possible adaptations for crop production has called for integrated assessment and modelling (IAM) approaches linking biophysical and economic models. This paper attempts to provide an overview of the present state of crop modelling to assess climate change risks to food production and to which extent crop models comply with IAM demands. Considerable progress has been made in modelling effects of climate variables, where crop models best satisfy IAM demands. Demands are partly satisfied for simulating commonly required assessment variables. However, progress on the number of simulated crops, uncertainty propagation related to model parameters and structure, adaptations and scaling are less advanced and lagging behind IAM demands. The limitations are considered substantial and apply to a different extent to all crop models. Overcoming these limitations will require joint efforts, and consideration of novel modelling approaches. |
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1364-8152 |
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CropM, ft_macsur |
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MA @ admin @ |
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4521 |
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Ruane, A.C.; Hudson, N.I.; Asseng, S.; Camarrano, D.; Ewert, F.; Martre, P.; Boote, K.J.; Thorburn, P.J.; Aggarwal, P.K.; Angulo, C.; Basso, B.; Bertuzzi, P.; Biernath, C.; Brisson, N.; Challinor, &rew J.; Doltra, J.; Gayler, S.; Goldberg, R.; Grant, R.F.; Heng, L.; Hooker, J.; Hunt, L.A.; Ingwersen, J.; Izaurralde, R.C.; Kersebaum, K.C.; Kumar, S.N.; Müller, C.; Nendel, C.; O’Leary, G.; Olesen, J.E.; Osborne, T.M.; Palosuo, T.; Priesack, E.; Ripoche, D.; Rötter, R.P.; Semenov, M.A.; Shcherbak, I.; Steduto, P.; Stöckle, C.O.; Stratonovitch, P.; Streck, T.; Supit, I.; Tao, F.; Travasso, M.; Waha, K.; Wallach, D.; White, J.W.; Wolf, J. |
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Title |
Multi-wheat-model ensemble responses to interannual climate variability |
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Journal Article |
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Year |
2016 |
Publication |
Environmental Modelling & Software |
Abbreviated Journal |
Env. Model. Softw. |
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Volume |
81 |
Issue |
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Pages |
86-101 |
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Keywords |
Crop modeling; Uncertainty; Multi-model ensemble; Wheat; AgMIP; Climate; impacts; Temperature; Precipitation; lnterannual variability; simulation-model; crop model; nitrogen dynamics; winter-wheat; large-area; systems simulation; farming systems; yield response; growth; water |
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We compare 27 wheat models’ yield responses to interannual climate variability, analyzed at locations in Argentina, Australia, India, and The Netherlands as part of the Agricultural Model Intercomparison and Improvement Project (AgMIP) Wheat Pilot. Each model simulated 1981-2010 grain yield, and we evaluate results against the interannual variability of growing season temperature, precipitation, and solar radiation. The amount of information used for calibration has only a minor effect on most models’ climate response, and even small multi-model ensembles prove beneficial. Wheat model clusters reveal common characteristics of yield response to climate; however models rarely share the same cluster at all four sites indicating substantial independence. Only a weak relationship (R-2 <= 0.24) was found between the models’ sensitivities to interannual temperature variability and their response to long-term warming, suggesting that additional processes differentiate climate change impacts from observed climate variability analogs and motivating continuing analysis and model development efforts. Published by Elsevier Ltd. |
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1364-8152 |
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CropM, ft_macsur |
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MA @ admin @ |
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4769 |
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Maiorano, A.; Martre, P.; Asseng, S.; Ewert, F.; Müller, C.; Rötter, R.P.; Ruane, A.C.; Semenov, M.A.; Wallach, D.; Wang, E.; Alderman, P.D.; Kassie, B.T.; Biernath, C.; Basso, B.; Cammarano, D.; Challinor, A.J.; Doltra, J.; Dumont, B.; Rezaei, E.E.; Gayler, S.; Kersebaum, K.C.; Kimball, B.A.; Koehler, A.-K.; Liu, B.; O’Leary, G.J.; Olesen, J.E.; Ottman, M.J.; Priesack, E.; Reynolds, M.; Stratonovitch, P.; Streck, T.; Thorburn, P.J.; Waha, K.; Wall, G.W.; White, J.W.; Zhao, Z.; Zhu, Y. |
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Title |
Crop model improvement reduces the uncertainty of the response to temperature of multi-model ensembles |
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Journal Article |
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Year |
2016 |
Publication |
Field Crops Research |
Abbreviated Journal |
Field Crops Research |
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Volume |
202 |
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5-20 |
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Keywords |
Impact uncertainty; High temperature; Model improvement; Multi-model ensemble; Wheat crop model |
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To improve climate change impact estimates and to quantify their uncertainty, multi-model ensembles (MMEs) have been suggested. Model improvements can improve the accuracy of simulations and reduce the uncertainty of climate change impact assessments. Furthermore, they can reduce the number of models needed in a MME. Herein, 15 wheat growth models of a larger MME were improved through re-parameterization and/or incorporating or modifying heat stress effects on phenology, leaf growth and senescence, biomass growth, and grain number and size using detailed field experimental data from the USDA Hot Serial Cereal experiment (calibration data set). Simulation results from before and after model improvement were then evaluated with independent field experiments from a CIMMYT world-wide field trial network (evaluation data set). Model improvements decreased the variation (10th to 90th model ensemble percentile range) of grain yields simulated by the MME on average by 39% in the calibration data set and by 26% in the independent evaluation data set for crops grown in mean seasonal temperatures >24 °C. MME mean squared error in simulating grain yield decreased by 37%. A reduction in MME uncertainty range by 27% increased MME prediction skills by 47%. Results suggest that the mean level of variation observed in field experiments and used as a benchmark can be reached with half the number of models in the MME. Improving crop models is therefore important to increase the certainty of model-based impact assessments and allow more practical, i.e. smaller MMEs to be used effectively. |
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2016-09-13 |
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Newsletter July 2016 |
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0378-4290 |
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CropM |
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CropMwp;wos; ft=macsur; wsnot_yet; |
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MA @ admin @ |
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4776 |
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Author |
Semenov, M.A.; Stratonovitch, P. |
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Local-scale CMIP5-based climate scenarios for MACSUR2 |
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Report |
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2016 |
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FACCE MACSUR Reports |
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8 |
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C2.2-D |
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CropM |
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Climate sensitivity of GCMs was used to select 5 GCMs from the CMIP5 ensemble for impact studies in MACSUR2. Selected GCMs for MACSUR2 are EC-EARTH (7), GFDL-CM3 (8) HadGEM2-ES (10), MIROC5 (13), and MPI-ESM-MR (15). These GCMs are evenly distributed among CMIP5 (Fig 1) and should capture, in principal, climate uncertainty of the CMIP5 ensemble. Using 5 GCMs will enable us to assess uncertainties in impacts related to uncertainty in climate projections. The selection of GCMs in MACSUR2 has a good overlap with selections of GCMs used in CORDEX and AgMIP projects. We used the LARS-WG generator to construct local-scale CMIP5-based climate scenarios for Europe (Semenov & Stratonovitch, 2015). Fifteen sites were selected in Europe for MACSUR2. For each site and each selected GCM, 100 yrs climate daily data were generated by LARS-WG for RCP4.5 and RCP8.5 emission scenarios and for baseline and 3 future periods: near-term (2021-2040), mid-term (2041-2060) and long-term (2081-2100). |
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MA @ admin @ |
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2270 |
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