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Author Coucheney, E.; Buis, S.; Launay, M.; Constantin, J.; Mary, B.; García de Cortázar-Atauri, I.; Ripoche, D.; Beaudoin, N.; Ruget, F.; &rianarisoa, K.S.; Le Bas, C.; Justes, E.; Léonard, J.
Title Accuracy, robustness and behavior of the STICS soil–crop model for plant, water and nitrogen outputs: Evaluation over a wide range of agro-environmental conditions in France Type Journal Article
Year (up) 2015 Publication Environmental Modelling & Software Abbreviated Journal Env. Model. Softw.
Volume 64 Issue Pages 177-190
Keywords soil-crop model; stics; model performances; plant biomass; soil nitrogen; soil water; remote-sensing data; goodness-of-fit; hydrological model; simulation-models; solar-radiation; regional-scale; climate-change; generic model; data set; validation
Abstract Soil-crop models are increasingly used as predictive tools to assess yield and environmental impacts of agriculture in a growing diversity of contexts. They are however seldom evaluated at a given time over a wide domain of use. We tested here the performances of the STICS model (v8.2.2) with its standard set of parameters over a dataset covering 15 crops and a wide range of agropedoclimatic conditions in France. Model results showed a good overall accuracy, with little bias. Relative RMSE was larger for soil nitrate (49%) than for plant biomass (35%) and nitrogen (33%) and smallest for soil water (10%). Trends induced by contrasted environmental conditions and management practices were well reproduced. Finally, limited dependency of model errors on crops or environments indicated a satisfactory robustness. Such performances make STICS a valuable tool for studying the effects of changes in agro-ecosystems over the domain explored. (C) 2014 Elsevier Ltd. All rights reserved.
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1364-8152 ISBN Medium Article
Area Expedition Conference
Notes CropM Approved no
Call Number MA @ admin @ Serial 4554
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Author Kuhnert, M.; Yeluripati, J.; Smith, P.; Hoffmann, H.; van Oijen, M.; Constantin, J.; Coucheney, E.; Dechow, R.; Eckersten, H.; Gaiser, T.; Grosz, B.; Haas, E.; Kersebaum, K.-C.; Kiese, R.; Klatt, S.; Lewan, E.; Nendel, C.; Raynal, H.; Sosa, C.; Specka, X.; Teixeira, E.; Wang, E.; Weihermüller, L.; Zhao, G.; Zhao, Z.; Ogle, S.; Ewert, F.
Title Impact analysis of climate data aggregation at different spatial scales on simulated net primary productivity for croplands Type Journal Article
Year (up) 2016 Publication European Journal of Agronomy Abbreviated Journal European Journal of Agronomy
Volume 88 Issue Pages 41-52
Keywords Net primary production; NPP; Scaling; Extreme events; Crop modelling; Climate Data; aggregation
Abstract For spatial crop and agro-systems modelling, there is often a discrepancy between the scale of measured driving data and the target resolution. Spatial data aggregation is often necessary, which can introduce additional uncertainty into the simulation results. Previous studies have shown that climate data aggregation has little effect on simulation of phenological stages, but effects on net primary production (NPP) might still be expected through changing the length of the growing season and the period of grain filling. This study investigates the impact of spatial climate data aggregation on NPP simulation results, applying eleven different models for the same study region (∼34,000 km2), situated in Western Germany. To isolate effects of climate, soil data and management were assumed to be constant over the entire study area and over the entire study period of 29 years. Two crops, winter wheat and silage maize, were tested as monocultures. Compared to the impact of climate data aggregation on yield, the effect on NPP is in a similar range, but is slightly lower, with only small impacts on averages over the entire simulation period and study region. Maximum differences between the five scales in the range of 1–100 km grid cells show changes of 0.4–7.8% and 0.0–4.8% for wheat and maize, respectively, whereas the simulated potential NPP averages of the models show a wide range (1.9–4.2 g C m−2 d−1 and 2.7–6.1 g C m−2 d−1for wheat and maize, respectively). The impact of the spatial aggregation was also tested for shorter time periods, to see if impacts over shorter periods attenuate over longer periods. The results show larger impacts for single years (up to 9.4% for wheat and up to 13.6% for maize). An analysis of extreme weather conditions shows an aggregation effect in vulnerability up to 12.8% and 15.5% between the different resolutions for wheat and maize, respectively. Simulations of NPP averages over larger areas (e.g. regional scale) and longer time periods (several years) are relatively insensitive to climate data.
Address 2016-09-13
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Newsletter July Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1161-0301 ISBN Medium Article
Area Expedition Conference
Notes CropM, ft_macsur Approved no
Call Number MA @ admin @ Serial 4775
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Author Savary, S.; Jouanin, C.; Félix, I.; Gourdain, E.; Piraux, F.; Brun, F.; Willocquet, L.
Title Assessing plant health in a network of experiments on hardy winter wheat varieties in France: patterns of disease-climate associations Type Journal Article
Year (up) 2016 Publication European Journal of Plant Pathology Abbreviated Journal Eur. J. Plant Pathol.
Volume 146 Issue Pages 741-755
Keywords Puccinia triticina; Puccinia striiformis; Fusarium graminearum; Fusarium culmorum; Fusarium avenaceum; Blumeria graminis; Zymoseptoria tritici; Categorical data; Risk factor; Multiple pathosystem; Correspondence analysis; Logistic regression
Abstract A data set generated by a multi-year (2003–2010) and multi-site network of experiments on winter wheat varieties grown at different levels of crop management is analysed in order to assess the importance of climate on the variability of wheat health. Wheat health is represented by the multiple pathosystem involving five components: leaf rust, yellow rust, fusarium head blight, powdery mildew, and septoria tritici blotch. An overall framework of associations between multiple diseases and climate variables is developed. This framework involves disease levels in a binary form (i.e. epidemic vs. non-epidemic) and synthesis variables accounting for climate over spring and early summer. The multiple disease-climate pattern of associations of this framework conforms to disease-specific knowledge of climate effects on the components of the pathosystem. It also concurs with a (climate-based) risk factor approach to wheat diseases. This report emphasizes the value of large scale data in crop health assessment and the usefulness of a risk factor approach for both tactical and strategic decisions for crop health management.
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0929-1873 1573-8469 ISBN Medium
Area CropM Expedition Conference
Notes CropMwp;wos; ftnot_macsur; Approved no
Call Number MA @ admin @ Serial 4755
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Author Stefańczyk, E.; Sobkowiak, S.; Brylińska, M.; Śliwka, J.
Title Diversity of Fusarium spp. associated with dry rot of potato tubers in Poland Type Journal Article
Year (up) 2016 Publication European Journal of Plant Pathology Abbreviated Journal Eur. J. Plant Pathol.
Volume Issue Pages
Keywords ITS; mycotoxin; pathogenicity; Solanum tuberosum; tef-1α; β-tubulin; sequence data; Trichothecenes; identification; fungus; pathogenicity; temperature; sensitivity; zearalenone; strains; disease
Abstract Fusarium spp. belong to the division Ascomycota and cause important plant diseases; these fungi may contaminate food products with mycotoxins, endangering human and animal health. Several Fusarium spp. have been associated with potato dry rot. The most frequent and devastating of these species are F. sambucinum, F. solani and F. oxysporum, depending on the geographic location and the season. Samples of potato tubers with dry rot symptoms were collected, and their putative fungal isolates were identified as Fusarium species using partial nucleotide sequences of the internal transcribed spacer, translation elongation factor 1-α and β-tubulin genes. Among 149 isolates, 12 species were identified. F. oxysporum was the most frequent (45 % of the isolates), followed by F. avenaceum (12.1 %), F. solani (10.7 %) and F. sambucinum (7.4 %). Phylogenetic analyses confirmed the species identifications and revealed a high diversity of F. solani and a low diversity of F. oxysporum. Potential producers of zearalenone and trichothecenes were identified within the obtained isolates using PCR markers. Isolates that were pathogenic to potatoes in laboratory tests were found in four species: F. sambucinum, F. avenaceum, F. culmorum, and F. graminearum. The effects of increased temperature and mixed inoculum on the pathogenicities of chosen species were evaluated. This study adds 434 potato-derived Fusarium sequences to the NCBI GenBank database and demonstrates that the list of Fusarium species and mycotoxins present in potato tubers may be richer than previously believed, regardless of whether these species cause dry rot or live as saprophytes.
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0929-1873 1573-8469 ISBN Medium Article
Area Expedition Conference
Notes CropM, ft_macsur Approved no
Call Number MA @ admin @ Serial 4721
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Author Zhao, G.; Hoffmann, H.; Yeluripati, J.; Xenia, S.; Nendel, C.; Coucheney, E.; Kuhnert, M.; Tao, F.; Constantin, J.; Raynal, H.; Teixeira, E.; Grosz, B.; Doro, L.; Kiese, R.; Eckersten, H.; Haas, E.; Cammarano, D.; Kassie, B.; Moriondo, M.; Trombi, G.; Bindi, M.; Biernath, C.; Heinlein, F.; Klein, C.; Priesack, E.; Lewan, E.; Kersebaum, K.-C.; Rötter, R.; Roggero, P.P.; Wallach, D.; Asseng, S.; Siebert, S.; Gaiser, T.; Ewert, F.
Title Evaluating the precision of eight spatial sampling schemes in estimating regional means of simulated yield for two crops Type Journal Article
Year (up) 2016 Publication Environmental Modelling & Software Abbreviated Journal Env. Model. Softw.
Volume 80 Issue Pages 100-112
Keywords Crop model; Stratified random sampling; Simple random sampling; Clustering; Up-scaling; Model comparison; Precision gain; species distribution models; systems simulation; weather data; large-scale; design; soil; optimization; growth; apsim; autocorrelation
Abstract We compared the precision of simple random sampling (SimRS) and seven types of stratified random sampling (StrRS) schemes in estimating regional mean of water-limited yields for two crops (winter wheat and silage maize) that were simulated by fourteen crop models. We found that the precision gains of StrRS varied considerably across stratification methods and crop models. Precision gains for compact geographical stratification were positive, stable and consistent across crop models. Stratification with soil water holding capacity had very high precision gains for twelve models, but resulted in negative gains for two models. Increasing the sample size monotonously decreased the sampling errors for all the sampling schemes. We conclude that compact geographical stratification can modestly but consistently improve the precision in estimating regional mean yields. Using the most influential environmental variable for stratification can notably improve the sampling precision, especially when the sensitivity behavior of a crop model is known.
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1364-8152 ISBN Medium Article
Area Expedition Conference
Notes CropM, ft_macsur Approved no
Call Number MA @ admin @ Serial 4724
Permanent link to this record