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Author Mansouri, M.; Dumont, B.; Destain, M.-F.
Title Modeling and prediction of nonlinear environmental system using Bayesian methods Type Journal Article
Year (down) 2013 Publication Computers and Electronics in Agriculture Abbreviated Journal Computers and Electronics in Agriculture
Volume 92 Issue Pages 16-31
Keywords state and parameter estimation; variational filter; particle filter; extended kalman filter; nonlinear environmental system; leaf area index and soil moisture model; extended kalman filter; state-space models; parameter-estimation; particle filters; navigation; tutorial; tracking
Abstract An environmental dynamic system is usually modeled as a nonlinear system described by a set of nonlinear ODEs. A central challenge in computational modeling of environmental systems is the determination of the model parameters. In these cases, estimating these variables or parameters from other easily obtained measurements can be extremely useful. This work addresses the problem of monitoring and modeling a leaf area index and soil moisture model (LSM) using state estimation. The performances of various conventional and state-of-the-art state estimation techniques are compared when they are utilized to achieve this objective. These techniques include the extended Kalman filter (EKF), particle filter (PF), and the more recently developed technique variational filter (VF). Specifically, two comparative studies are performed. In the first comparative study, the state variables (the leaf-area index LAI, the volumetric water content of the soil layer 1, HUR1 and the volumetric water content of the soil layer 2, HUR2) are estimated from noisy measurements of these variables, and the various estimation techniques are compared by computing the estimation root mean square error (RMSE) with respect to the noise-free data. In the second comparative study, the state variables as well as the model parameters are simultaneously estimated. In this case, in addition to comparing the performances of the various state estimation techniques, the effect of number of estimated model parameters on the accuracy and convergence of these techniques are also assessed. The results of both comparative studies show that the PF provides a higher accuracy than the EKF, which is due to the limited ability of the EKF to handle highly nonlinear processes. The results also show that the VF provides a significant improvement over the PF because, unlike the PF which depends on the choice of sampling distribution used to estimate the posterior distribution, the VF yields an optimum choice of the sampling distribution, which also accounts for the observed data. The results of the second comparative study show that, for all techniques, estimating more model parameters affects the estimation accuracy as well as the convergence of the estimated states and parameters. However, the VF can still provide both convergence as well as accuracy related advantages over other estimation methods. (C) 2013 Elsevier B.V. All rights reserved.
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Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0168-1699 ISBN Medium Article
Area Expedition Conference
Notes CropM Approved no
Call Number MA @ admin @ Serial 4495
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Author Orsini, F.; Alnayef, M.; Bona, S.; Maggio, A.; Gianquinto, G.
Title Low stomatal density and reduced transpiration facilitate strawberry adaptation to salinity Type Journal Article
Year (down) 2012 Publication Environmental and Experimental Botany Abbreviated Journal Environmental and Experimental Botany
Volume 81 Issue Pages 1-10
Keywords stomatal density; leaf gas exchanges; transpiration; salt tolerance; osmotic adjustment; salt-stress tolerance; water-use efficiency; nacl salinity; hydraulic conductivity; irrigation water; dynamic indexes; leaf expansion; abscisic-acid; growth; plants
Abstract Water and soil salinization are major constraints to agricultural productions because plant adaptation to hyperosmotic environments is generally associated to reduced growth and ultimately yield loss. Understanding the physiological/molecular mechanisms that link adaptation and growth is one of the greatest challenges in plant stress research since it would allow us to better define strategies to improve crop salt tolerance. In this study we attempted to establish a functional link between morphological and physiological traits in strawberry in order to identify margins to “uncouple” plant growth and stress adaptation. Two strawberry cultivars, Elsanta and Elsinore, were grown under 0, 10.20 and 40 mM NaCl. Upon salinization Elsanta plants maintained a larger and more functional leaf area compared to Elsinore plants, which were irreversibly damaged at 40 mM NaCl. The tolerance of Elsanta was correlated with a constitutive reduced transpirational flux due to low stomata! density (173 vs. 234 stomata mm(-2) in Elsanta and Elsinore, respectively), which turned out to be critical to pre-adapt plants to the oncoming stress. The reduced transpiration rate of Elsanta (14.7 g H2O plant(-1) h(-1)) respect to Elsinore (17.7 g H2O plant(-1) h(-1)) most likely delayed the accumulation of toxic ions into the leaves, preserved tissues dehydration and consented to adjust more effectively to the hyperosmotic environment. Although we cannot rule out the contribution of other physiological and molecular mechanisms to the relatively higher tolerance of Elsanta, here we demonstrate that low stomatal density may be beneficial for cultivars prescribed to be used in marginal environments in terms of salinity and/or drought. (C) 2012 Elsevier B.V. All rights reserved.
Address 2016-10-31
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0098-8472 ISBN Medium Article
Area Expedition Conference
Notes CropM Approved no
Call Number MA @ admin @ Serial 4797
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Author Jing, Q.; Bélanger, G.; Baron, V.; Bonesmo, H.; Virkajärvi, P.; Young, D.
Title Regrowth simulation of the perennial grass timothy Type Journal Article
Year (down) 2012 Publication Ecological Modelling Abbreviated Journal Ecol. Model.
Volume 232 Issue Pages 64-77
Keywords biomass; carbohydrate; leaf area index; n uptake; reserve-dependent growth; temperature; nutritive-value; carbohydrate reserves; phleum-pratense; catimo model; leaf-area; nitrogen-fertilization; spring harvest; meadow fescue; tall fescue; growth
Abstract Several process-based models for simulating the growth of perennial grasses have been developed but few include the simulation of regrowth. The model CATIMO simulates the primary growth of timothy (Phleum pratense L), an important perennial forage grass species in northern regions of Europe and North America. Our objective was to further develop the model CATIMO to simulate timothy regrowth using the concept of reserve-dependent growth. The performance of this modified CATIMO model in simulating leaf area index (LAI), biomass dry matter (DM) yield, and N uptake of regrowth was assessed with data from four independent field experiments in Norway, Finland, and western and eastern Canada using an approach that combines graphical comparison and statistical analysis. Biomass DM yield and N uptake of regrowth were predicted at the same accuracy as primary growth with linear regression coefficients of determination between measured and simulated values greater than 0.79, model simulation efficiencies greater than 0.78, and normalized root mean square errors (14-30% for biomass and 24-34% for N uptake) comparable with the coefficients of variation of measured data (1-21% for biomass and 1-25% for N uptake). The model satisfactorily simulated the regrowth LAI but only up to a value of about 4.0. The modified CATIMO model with its capacity to simulate regrowth provides a framework to simulate perennial grasses with multiple harvests, and to explore management options for sustainable grass production under different environmental conditions. Crown Copyright (C) 2012 Published by Elsevier B.V. All rights reserved.
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Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0304-3800 ISBN Medium Article
Area Expedition Conference
Notes CropM, LiveM Approved no
Call Number MA @ admin @ Serial 4473
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Author Below, T.B.; Mutabazi, K.D.; Kirschke, D.; Franke, C.; Sieber, S.; Siebert, R.; Tscherning, K.
Title Can farmers’ adaptation to climate change be explained by socio-economic household-level variables Type Journal Article
Year (down) 2012 Publication Global Environmental Change Abbreviated Journal Glob. Environ. Change
Volume 22 Issue 1 Pages 223-235
Keywords Sub-Saharan Africa; Tanzania; Adaptive capacity; Index; Vulnerability; Adaptation; adaptive capacity; environmental-change; south-africa; vulnerability; variability; resilience; tanzania; framework; drought; policy
Abstract A better understanding of processes that shape farmers’ adaptation to climate change is critical to identify vulnerable entities and to develop well-targeted adaptation policies. However, it is currently poorly understood what determines farmers’ adaptation and how to measure it. In this study, we develop an activity-based adaptation index (AAI) and explore the relationship between socioeconomic variables and farmers’ adaptation behavior by means of an explanatory factor analysis and a multiple linear regression model using latent variables. The model was tested in six villages situated in two administrative wards in the Morogoro region of Tanzania. The Mlali ward represents a system of relatively high agricultural potential, whereas the Gairo ward represents a system of low agricultural potential. A household survey, a rapid rural appraisal and, a stakeholder workshop were used for data collection. The data were analyzed using factor analysis, multiple linear regression, descriptive statistical methods and qualitative content analysis. The empirical results are discussed in the context of theoretical concepts of adaptation and the sustainable livelihood approach. We found that public investment in rural infrastructure, in the availability and technically efficient use of inputs, in a good education system that provides equal chances for women, and in the strengthening of social capital, agricultural extension and, microcredit services are the best means of improving the adaptation of the farmers from the six villages in Gairo and Mlali. We conclude that the newly developed AAI is a simple but promising way to capture the complexity of adaptation processes that addresses a number of shortcomings of previous index studies.
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Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0959-3780 ISBN Medium Article
Area Expedition Conference
Notes TradeM Approved no
Call Number MA @ admin @ Serial 4467
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