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Author |
Sharif, B.; Makowski, D.; Plauborg, F.; Olesen, J.E. |
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Title |
Comparison of regression techniques to predict response of oilseed rape yield to variation in climatic conditions in Denmark |
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Journal Article |
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Year |
2017 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
Europ. J. Agron. |
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Volume |
82 |
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Pages |
11-20 |
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Keywords |
Winter oilseed rape; Statistical models; Yield; Climate; Regression |
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Abstract |
Highlights • Regularization techniques for regression outperformed the classical regression techniques in predicting crop yields. • Different regression techniques with similar prediction accuracy showed different responses of major climatic variables to crop yield. • The regression models showed some responses of crop yield to climatic conditions that is mostly absent in process based crop models. Abstract Statistical regression models represent alternatives to process-based dynamic models for predicting the response of crop yields to variation in climatic conditions. Regression models can be used to quantify the effect of change in temperature and precipitation on yields. However, it is difficult to identify the most relevant input variables that should be included in regression models due to the high number of candidate variables and to their correlations. This paper compares several regression techniques for modeling response of winter oilseed rape yield to a high number of correlated input variables. Several statistical regression methods were fitted to a dataset including 689 observations of winter oilseed rape yield from replicated field experiments conducted in 239 sites in Denmark, covering nearly all regions of the country from 1992 to 2013. Regression methods were compared by cross-validation. The regression methods leading to the most accurate yield predictions were Lasso and Elastic Net, and the least accurate methods were ordinary least squares and stepwise regression. Partial least squares and ridge regression methods gave intermediate results. The estimated relative yield change for a +1°C temperature increase during flowering was estimated to range between 0 and +6 %, depending on choice of regression method. Precipitation was found to have an adverse effect on yield during autumn and winter. It was estimated that an increase in precipitation of +1 mm/day would result in a relative yield change ranging from 0 to −4 %. Soil type was also important for crop yields with lower yields on sandy soils compared to loamy soils. Later sowing was found to result in increased crop yield. The estimated effect of climate on yield was highly sensitive to the chosen regression method. Regression models showing similar performance led in some cases to different conclusions with respect to effect of temperature and precipitation. Hence, it is recommended to apply an ensemble of regression models, in order to account for the sensitivity of the data driven models for projecting crop yield under climate change. |
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1161-0301 |
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CropM, ft_macsur |
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MA @ admin @ |
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4966 |
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Wallach, D.; Thorburn, P.; Asseng, S.; Challinor, A.J.; Ewert, F.; Jones, J.W.; Rötter, R.; Ruane, A. |
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Title |
Estimating model prediction error: Should you treat predictions as fixed or random |
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Journal Article |
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Year |
2016 |
Publication |
Environmental Modelling & Software |
Abbreviated Journal |
Env. Model. Softw. |
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Volume |
84 |
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Pages |
529-539 |
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Keywords |
Crop model; Uncertainty; Prediction error; Parameter uncertainty; Input uncertainty; Model structure uncertainty |
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Crop models are important tools for impact assessment of climate change, as well as for exploring management options under current climate. It is essential to evaluate the uncertainty associated with predictions of these models. We compare two criteria of prediction error; MSEPfixed, which evaluates mean squared error of prediction for a model with fixed structure, parameters and inputs, and MSEPuncertain(X), which evaluates mean squared error averaged over the distributions of model structure, inputs and parameters. Comparison of model outputs with data can be used to estimate the former. The latter has a squared bias term, which can be estimated using hindcasts, and a model variance term, which can be estimated from a simulation experiment. The separate contributions to MSEPuncertain(X) can be estimated using a random effects ANOVA. It is argued that MSEPuncertain(X) is the more informative uncertainty criterion, because it is specific to each prediction situation. |
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1364-8152 |
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CropM, ft_macsur |
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MA @ admin @ |
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4773 |
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Humblot, P.; Jayet, P.A.; Clerino, P.; Leconte-Demarsy, D.; Szopa, S.; Castell, J.F. |
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Title |
Assessment of ozone impacts on farming systems: a bio-economic modeling approach applied to the widely diverse French case |
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Journal Article |
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2013 |
Publication |
Ecological Economics |
Abbreviated Journal |
Ecol. Econ. |
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85 |
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50-58 |
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Keywords |
ozone; bio-economic modeling; agricultural production; land use; greenhouse gas; carbon sequestration; abatement costs; climate-change; crops; agriculture; eu; emissions; benefits; level |
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Abstract |
As a result of anthropogenic activities, ozone is produced in the surface atmosphere, causing direct damage to plants and reducing crop yields. By combining a biophysical crop model with an economic supply model we were able to predict and quantify this effect at a fine spatial resolution. We applied our approach to the very varied French case and showed that ozone has significant productivity and land-use effects. A comparison of moderate and high ozone scenarios for 2030 shows that wheat production may decrease by more than 30% and barley production may increase by more than 14% as surface ozone concentration increases. These variations are due to the direct effect of ozone on yields as well as to modifications in land use caused by a shift toward more ozone-resistant crops: our study predicts a 16% increase in the barley-growing area and an equal decrease in the wheat-growing area. Moreover, mean agricultural gross margin losses can go as high as 2.5% depending on the ozone scenario, and can reach 7% in some particularly affected regions. A rise in ozone concentration was also associated with a reduction of agricultural greenhouse gas emissions of about 2%, as a result of decreased use of nitrogen fertilizers. One noteworthy result was that major impacts, including changes in land use, do not necessarily occur in ozone high concentration zones, and may strongly depend on farm systems and their adaptation capability. Our study suggests that policy makers should view ozone pollution as a major potential threat to agricultural yields. (C) 2012 Elsevier B.V. All rights reserved. |
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0921-8009 |
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TradeM |
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MA @ admin @ |
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4604 |
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Author |
Leclère, D.; Jayet, P.-A.; de Noblet-Ducoudré, N. |
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Title |
Farm-level Autonomous Adaptation of European Agricultural Supply to Climate Change |
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Journal Article |
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Year |
2013 |
Publication |
Ecological Economics |
Abbreviated Journal |
Ecol. Econ. |
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Volume |
87 |
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1-14 |
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Keywords |
climate change; agriculture; europe; residual impact; autonomous adaptation; water use efficiency; modeling; land-use; integrated assessment; future scenarios; change impacts; model; vulnerability; performance; emissions; nitrogen; lessons |
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The impact of climate change on European agriculture is subject to a significant uncertainty, which reflects the intertwined nature of agriculture. This issue involves a large number of processes, ranging from field to global scales, which have not been fully integrated yet. In this study, we intend to help bridging this gap by quantifying the effect of farm-scale autonomous adaptations in response to changes in climate. To do so, we use a modelling framework coupling the STICS generic crop model to the AROPAj microeconomic model of European agricultural supply. This study provides a first estimate of the role of such adaptations, consistent at the European scale while detailed across European regions. Farm-scale autonomous adaptations significantly alter the impact of climate change over Europe, by widely alleviating negative impacts on crop yields and gross margins. They significantly increase European production levels. However, they also have an important and heterogeneous impact on irrigation water withdrawals, which exacerbate the differences in ambient atmospheric carbon dioxide concentrations among climate change scenarios. (c) 2012 Elsevier B.V. All rights reserved. |
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0921-8009 |
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TradeM |
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MA @ admin @ |
Serial |
4606 |
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Author |
Zhang, S.; Tao, F.; Zhang, Z. |
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Title |
Uncertainty from model structure is larger than that from model parameters in simulating rice phenology in China |
Type |
Journal Article |
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Year |
2017 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
Europ. J. Agron. |
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Volume |
87 |
Issue |
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Pages |
30-39 |
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Keywords |
Crop model, Extreme weather, Impacts, Rice development rate, Uncertainty; Climate-Change; Growth Duration; Crop Model; Ceres-Rice; Wheat; Temperature; Impact; Yield; Optimization; Performance |
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Abstract |
Rice models have been widely used in simulating and predicting rice phenology in contrasting climate zones, however the uncertainties from model structure (different equations or models) and/or model parameters were rarely investigated. Here, five rice phenological models/modules (Le., CERES-Rice, ORYZA2000, RCM, Beta Model and SIMRIW) were applied to simulate rice phenology at 23 experimental stations from 1992 to 2009 in two major rice cultivation regions of China: the northeastern China and the southwestern China. To investigate the uncertainties from model biophysical parameters, each model was run with randomly perturbed 50 sets of parameters. The results showed that the median of ensemble simulations were better than the simulation by most models. Models couldn’t simulate well in some specific years despite of parameters optimization, suggesting model structure limit model performance in some cases. The models adopting accumulative thermal time function (e.g., CERES-Rice and ORYZA2000) had better performance in the southwestern China, in contrast, those adopting exponential function (e.g., Beta model and RCM model) had better performance in the northeastern China. In northeastern China, the contribution of model structure and model parameters to model total variance was, respectively, about 55.90% and 44.10% in simulating heading date, and about 75.43% and 24.57% in simulating maturity date. In the southwestern China, the contribution of model structure and model parameters to model total variance was, respectively, about 79.97% and 27.03% in simulating heading date, about 92.15% and 7.85% in simulating maturity date. Uncertainty from model structure was the most relevant source. The results highlight that the temperature response functions of rice development rate under extreme climate conditions should be improved based on environment-controlled experimental data. |
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2017-08-07 |
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English |
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Series Issue |
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ISSN |
1161-0301 |
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Notes |
CropM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
5170 |
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Permanent link to this record |