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Author Mansouri, M.; Dumont, B.; Leemans, V.; Destain, M.-F.
Title Bayesian methods for predicting LAI and soil water content Type Journal Article
Year 2014 Publication Precision Agriculture Abbreviated Journal Precision Agric.
Volume 15 Issue 2 Pages 184-201
Keywords crop model; bayes; data assimilation; extended kalman filtering; particle filtering; variational filtering; leaf-area index; parameter-estimation; crop models; moisture; instruments; management; sensors; state
Abstract LAI of winter wheat (Triticum aestivum L.) and soil water content of the topsoil (200 mm) and of the subsoil (500 mm) were considered as state variables of a dynamic soil-crop system. This system was assumed to progress according to a Bayesian probabilistic state space model, in which real values of LAI and soil water content were daily introduced in order to correct the model trajectory and reach better future evolution. The chosen crop model was mini STICS which can reduce the computing and execution times while ensuring the robustness of data processing and estimation. To predict simultaneously state variables and model parameters in this non-linear environment, three techniques were used: extended Kalman filtering (EKF), particle filtering (PF), and variational filtering (VF). The significantly improved performance of the VF method when compared to EKF and PF is demonstrated. The variational filter has a low computational complexity and the convergence speed of states and parameters estimation can be adjusted independently. Detailed case studies demonstrated that the root mean square error of the three estimated states (LAI and soil water content of two soil layers) was smaller and that the convergence of all considered parameters was ensured when using VF. Assimilating measurements in a crop model allows accurate prediction of LAI and soil water content at a local scale. As these biophysical properties are key parameters in the crop-plant system characterization, the system has the potential to be used in precision farming to aid farmers and decision makers in developing strategies for site-specific management of inputs, such as fertilizers and water irrigation.
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1385-2256 ISBN Medium Article
Area Expedition Conference
Notes CropM, ftnotmacsur Approved no
Call Number MA @ admin @ Serial 4629
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Author Dumont, B.; Leemans, V.; Ferrandis, S.; Bodson, B.; Destain, J.-P.; Destain, M.-F.
Title Assessing the potential of an algorithm based on mean climatic data to predict wheat yield Type Journal Article
Year 2014 Publication Precision Agriculture Abbreviated Journal Precision Agric.
Volume 15 Issue 3 Pages 255-272
Keywords stics model; yield prediction; real-time; proxy-sensing; stochastic weather generator; crop yield; mediterranean environment; simulation-model; variability; nitrogen; ensembles; forecasts; demeter; europe
Abstract The real-time non-invasive determination of crop biomass and yield prediction is one of the major challenges in agriculture. An interesting approach lies in using process-based crop yield models in combination with real-time monitoring of the input climatic data of these models, but unknown future weather remains the main obstacle to reliable yield prediction. Since accurate weather forecasts can be made only a short time in advance, much information can be derived from analyzing past weather data. This paper presents a methodology that addresses the problem of unknown future weather by using a daily mean climatic database, based exclusively on available past measurements. It involves building climate matrix ensembles, combining different time ranges of projected mean climate data and real measured weather data originating from the historical database or from real-time measurements performed in the field. Used as an input for the STICS crop model, the datasets thus computed were used to perform statistical within-season biomass and yield prediction. This work demonstrated that a reliable predictive delay of 3-4 weeks could be obtained. In combination with a local micrometeorological station that monitors climate data in real-time, the approach also enabled us to (i) predict potential yield at the local level, (ii) detect stress occurrence and (iii) quantify yield loss (or gain) drawing on real monitored climatic conditions of the previous few days.
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1385-2256 1573-1618 ISBN Medium Article
Area Expedition Conference
Notes CropM Approved no
Call Number MA @ admin @ Serial 4621
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Author Dumont, B.; Basso, B.; Leemans, V.; Bodson, B.; Destain, J.-P.; Destain, M.-F.
Title Systematic analysis of site-specific yield distributions resulting from nitrogen management and climatic variability interactions Type Journal Article
Year 2015 Publication Precision Agriculture Abbreviated Journal Precision Agric.
Volume 16 Issue 4 Pages 361-384
Keywords nitrogen management; climatic variability; lars-wg weather generator; stics soil-crop model; pearson system; probability risk assessment; crop model stics; fertilizer nitrogen; generic model; wheat yield; maize; simulation; skewness; field; agriculture; scenarios
Abstract At the plot level, crop simulation models such as STICS have the potential to evaluate risk associated with management practices. In nitrogen (N) management, however, the decision-making process is complex because the decision has to be taken without any knowledge of future weather conditions. The objective of this paper is to present a general methodology for assessing yield variability linked to climatic uncertainty and variable N rate strategies. The STICS model was coupled with the LARS-Weather Generator. The Pearson system and coefficients were used to characterise the shape of yield distribution. Alternatives to classical statistical tests were proposed for assessing the normality of distributions and conducting comparisons (namely, the Jarque-Bera and Wilcoxon tests, respectively). Finally, the focus was put on the probability risk assessment, which remains a key point within the decision process. The simulation results showed that, based on current N application practice among Belgian farmers (60-60-60 kgN ha(-1)), yield distribution was very highly significantly non-normal, with the highest degree of asymmetry characterised by a skewness value of -1.02. They showed that this strategy gave the greatest probability (60 %) of achieving yields that were superior to the mean (10.5 t ha(-1)) of the distribution.
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1385-2256 ISBN Medium Article
Area Expedition Conference
Notes CropM, ft_macsur Approved no
Call Number MA @ admin @ Serial 4519
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Author Tao, F.; Zhang, S.; Zhang, Z.; Rötter, R.P.
Title Temporal and spatial changes of maize yield potentials and yield gaps in the past three decades in China Type Journal Article
Year 2015 Publication Agriculture, Ecosystems and Environment Abbreviated Journal Agric. Ecosyst. Environ.
Volume 208 Issue Pages 12-20
Keywords agronomic management; climate change; food security; impact; water stress; yield potential; resource use efficiency; northeast china; climate-change; food security; environmental-quality; crop productivity; plain; agriculture; management; intensification
Abstract The precise spatially explicit knowledge about crop yield potentials and yield gaps is essential to guide sustainable intensification of agriculture. In this study, the maize yield potentials from 1980 to 2008 across the major maize production regions of China were firstly estimated by county using ensemble simulation of a well-validated large scale crop model, i.e., MCWLA-Maize model. Then, the temporal and spatial patterns of maize yield potentials and yield gaps during 1980-2008 were presented and analyzed. The results showed that maize yields became stagnated at 32.4% of maize-growing areas during the period. In the major maize production regions, i.e., northeastern China, the North China Plain (NCP) and southwestern China, yield gap percentages were generally less than 40% and particularly less than 20% in some areas. By contrast, in northern and southern China, where actual yields were relatively lower, yield gap percentages were generally larger than 40%. The areas with yield gap percentages less than 20% and less than 40% accounted for 8.2% and 27.6% of maize-growing areas, respectively. During the period, yield potentials decreased in the NCP and southwestern China due to increase in temperature and decrease in solar radiation; by contrast, increased in northern, northeastern and southeastern China due to increases in both temperature and solar radiation. Yield gap percentages decreased generally by 2% per year across the major maize production regions, although increased in some areas in northern and northeastern China. The shrinking of yield gap was due to increases in actual yields and decreases in yield potentials in the NCP and southwestern China; and due to larger increases in actual yields than in yield potentials in northeastern and southeastern China. The results highlight the importance of sustainable intensification of agriculture to close yield gaps, as well as breeding new cultivars to increase yield potentials, to meet the increasing food demand. (C) 2015 Elsevier B.V. All rights reserved.
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0167-8809 ISBN Medium Article
Area Expedition Conference
Notes CropM, ft_macsur Approved no
Call Number MA @ admin @ Serial 4715
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Author Mansouri, M.; Dumont, B.; Destain, M.-F.
Title Modeling and prediction of nonlinear environmental system using Bayesian methods Type Journal Article
Year 2013 Publication Computers and Electronics in Agriculture Abbreviated Journal Computers and Electronics in Agriculture
Volume 92 Issue Pages 16-31
Keywords state and parameter estimation; variational filter; particle filter; extended kalman filter; nonlinear environmental system; leaf area index and soil moisture model; extended kalman filter; state-space models; parameter-estimation; particle filters; navigation; tutorial; tracking
Abstract An environmental dynamic system is usually modeled as a nonlinear system described by a set of nonlinear ODEs. A central challenge in computational modeling of environmental systems is the determination of the model parameters. In these cases, estimating these variables or parameters from other easily obtained measurements can be extremely useful. This work addresses the problem of monitoring and modeling a leaf area index and soil moisture model (LSM) using state estimation. The performances of various conventional and state-of-the-art state estimation techniques are compared when they are utilized to achieve this objective. These techniques include the extended Kalman filter (EKF), particle filter (PF), and the more recently developed technique variational filter (VF). Specifically, two comparative studies are performed. In the first comparative study, the state variables (the leaf-area index LAI, the volumetric water content of the soil layer 1, HUR1 and the volumetric water content of the soil layer 2, HUR2) are estimated from noisy measurements of these variables, and the various estimation techniques are compared by computing the estimation root mean square error (RMSE) with respect to the noise-free data. In the second comparative study, the state variables as well as the model parameters are simultaneously estimated. In this case, in addition to comparing the performances of the various state estimation techniques, the effect of number of estimated model parameters on the accuracy and convergence of these techniques are also assessed. The results of both comparative studies show that the PF provides a higher accuracy than the EKF, which is due to the limited ability of the EKF to handle highly nonlinear processes. The results also show that the VF provides a significant improvement over the PF because, unlike the PF which depends on the choice of sampling distribution used to estimate the posterior distribution, the VF yields an optimum choice of the sampling distribution, which also accounts for the observed data. The results of the second comparative study show that, for all techniques, estimating more model parameters affects the estimation accuracy as well as the convergence of the estimated states and parameters. However, the VF can still provide both convergence as well as accuracy related advantages over other estimation methods. (C) 2013 Elsevier B.V. All rights reserved.
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0168-1699 ISBN Medium Article
Area Expedition Conference
Notes CropM Approved no
Call Number MA @ admin @ Serial 4495
Permanent link to this record