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Author |
De Swaef, T.; Bellocchi, G.; Aper, J.; Lootens, P.; Roldan-Ruiz, I. |
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Title |
Use of identifiability analysis in designing phenotyping experiments for modelling forage production and quality |
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Journal Article |
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Year |
2019 |
Publication |
Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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Volume |
70 |
Issue |
9 |
Pages |
2587-2604 |
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Keywords |
Breeding; grassland modelling; identifiability analysis; perennial; ryegrass; phenotyping; sensitivity analysis; pasture simulation-model; practical identifiability; crop; water; parameters; systems; carbon; uncertainty; sensitivity; emissions |
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Abstract |
Agricultural systems models are complex and tend to be over-parameterized with respect to observational datasets. Practical identifiability analysis based on local sensitivity analysis has proved effective in investigating identifiable parameter sets in environmental models, but has not been applied to agricultural systems models. Here, we demonstrate that identifiability analysis improves experimental design to ensure independent parameter estimation for yield and quality outputs of a complex grassland model. The Pasture Simulation model (PaSim) was used to demonstrate the effectiveness of practical identifiability analysis in designing experiments and measurement protocols within phe-notyping experiments with perennial ryegrass. Virtual experiments were designed combining three factors: frequency of measurements, duration of the experiment. and location of trials. Our results demonstrate that (i) PaSim provides sufficient detail in terms of simulating biomass yield and quality of perennial ryegrass for use in breeding, (ii) typical breeding trials are insufficient to parameterize all influential parameters, (iii) the frequency of measurements is more important than the number of growing seasons to improve the identifiability of PaSim parameters, and (iv) identifiability analysis provides a sound approach for optimizing the design of multi-location trials. Practical identifiability analysis can play an important role in ensuring proper exploitation of phenotypic data and cost-effective multi-location experimental designs. Considering the growing importance of simulation models, this study supports the design of experiments and measurement protocols in the phenotyping networks that have recently been organized. |
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2020-02-14 |
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0022-0957 |
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LiveM, ft_macsur |
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no |
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Call Number |
MA @ admin @ |
Serial |
5231 |
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Author |
Pasqui, M.; Di Giuseppe, E. |
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Title |
Climate change, future warming, and adaptation in Europe |
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Journal Article |
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Year |
2019 |
Publication |
Animal Frontiers |
Abbreviated Journal |
Animal Frontiers |
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Volume |
9 |
Issue |
1 |
Pages |
6-11 |
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Keywords |
heat waves; impacts; perception; vulnerability; temperature-humidity index; extremes indexes |
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Abstract |
In recent decades, the increased temperatures reported in Europe and in the Mediterranean basin represent one of the clearest footprints of climate change along with increased frequency of heat waves. These climate modifications put the environment and human activities under strong pressure with a resulting need for designing new adaptation and mitigation strategies. The climate change challenge is unprecedented for humanity and is recognized as a priority topic for future research. Changes in the way we think and behave are critical challenges at the global and regional levels. |
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2020-06-08 |
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LiveM, ft_macsur |
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MA @ admin @ |
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5236 |
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Author |
Kahiluoto, H.; Kaseva, J.; Balek, J.; Olesen, J.E.; Ruiz-Ramos, M.; Gobin, A.; Kersebaum, K.C.; Takac, J.; Ruget, F.; Ferrise, R.; Bezak, P.; Capellades, G.; Dibari, C.; Makinen, H.; Nendel, C.; Ventrella, D.; Rodriguez, A.; Bindi, M.; Trnka, M. |
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Title |
Decline in climate resilience of European wheat |
Type |
Journal Article |
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Year |
2019 |
Publication |
Proceedings of the National Academy of Sciences of the United States of America |
Abbreviated Journal |
Proc. Natl. Acad. Sci. U. S. A. |
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Volume |
116 |
Issue |
1 |
Pages |
123-128 |
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Keywords |
wheat; cultivar; Europe; climate resilience; response diversity; Diversity; Weather; Growth; Shifts; Crops; Yield; Variability |
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Abstract |
Food security relies on the resilience of staple food crops to climatic variability and extremes, but the climate resilience of European wheat is unknown. A diversity of responses to disturbance is considered a key determinant of resilience. The capacity of a sole crop genotype to perform well under climatic variability is limited; therefore, a set of cultivars with diverse responses to weather conditions critical to crop yield is required. Here, we show a decline in the response diversity of wheat in farmers’ fields in most European countries after 2002-2009 based on 101,000 cultivar yield observations. Similar responses to weather were identified in cultivar trials among central European countries and southern European countries. A response diversity hotspot appeared in the trials in Slovakia, while response diversity “deserts” were identified in Czechia and Germany and for durum wheat in southern Europe. Positive responses to abundant precipitation were lacking. This assessment suggests that current breeding programs and cultivar selection practices do not sufficiently prepare for climatic uncertainty and variability. Consequently, the demand for climate resilience of staple food crops such as wheat must be better articulated. Assessments and communication of response diversity enable collective learning across supply chains. Increased awareness could foster governance of resilience through research and breeding programs, incentives, and regulation. |
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2019-01-17 |
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0027-8424 |
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CropM, ft_macsur |
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MA @ admin @ |
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5226 |
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Author |
Mitter, H.; Techen, A.-K.; Sinabell, F.; Helming, K.; Kok, K.; Priess, J.A.; Schmid, E.; Bodirsky, B.L.; Holman, I.; Lehtonen, H.; Leip, A.; Le Mouel, C.; Mathijs, E.; Mehdi, B.; Michetti, M.; Mittenzwei, K.; Mora, O.; Oygarden, L.; Reidsma, P.; Schaldach, R.; Schoenhart, M. |
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Title |
A protocol to develop Shared Socio-economic Pathways for European agriculture |
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Journal Article |
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Year |
2019 |
Publication |
Journal of Environmental Management |
Abbreviated Journal |
J. Environ. Manage. |
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Volume |
252 |
Issue |
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Pages |
Unsp 109701 |
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Keywords |
EUR-Agri-SSP; Consistent storylines; Narrative; Integrated assessment; Social environmental system; Climate change; land-use change; global environmental-change; climate-change; scenario; development; transdisciplinary research; sustainability science; integrated-assessment; future; adaptation; framework |
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Abstract |
Moving towards a more sustainable future requires concerted actions, particularly in the context of global climate change. Integrated assessments of agricultural systems (IAAS) are considered valuable tools to provide sound information for policy and decision-making. IAAS use storylines to define socio-economic and environmental framework assumptions. While a set of qualitative global storylines, known as the Shared Socio-economic Pathways (SSPs), is available to inform integrated assessments at large scales, their spatial resolution and scope is insufficient for regional studies in agriculture. We present a protocol to operationalize the development of Shared Socio-economic Pathways for European agriculture – Eur-Agri-SSPs- to support IAAS. The proposed design of the storyline development process is based on six quality criteria: plausibility, vertical and horizontal consistency, salience, legitimacy, richness and creativity. Trade-offs between these criteria may occur. The process is science-driven and iterative to enhance plausibility and horizontal consistency. A nested approach is suggested to link storylines across scales while maintaining vertical consistency. Plausibility, legitimacy, salience, richness and creativity shall be stimulated in a participatory and interdisciplinary storyline development process. The quality criteria and process design requirements are combined in the protocol to increase conceptual and methodological transparency. The protocol specifies nine working steps. For each step, suitable methods are proposed and the intended level and format of stakeholder engagement are discussed. A key methodological challenge is to link global SSPs with regional perspectives provided by the stakeholders, while maintaining vertical consistency and stakeholder buy-in. We conclude that the protocol facilitates systematic development and evaluation of storylines, which can be transferred to other regions, sectors and scales and supports intercomparisons of IAAS. |
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2020-02-14 |
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English |
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Series Editor |
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0301-4797 |
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Notes |
TradeM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
5222 |
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Permanent link to this record |
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Sandor, R.; Ehrhardt, F.; Grace, P.; Recous, S.; Smith, P.; Snow, V.; Soussana, J.-F.; Basso, B.; Bhatia, A.; Brilli, L.; Doltra, J.; Dorich, C.D.; Doro, L.; Fitton, N.; Grant, B.; Harrison, M.T.; Kirschbaum, M.U.F.; Klumpp, K.; Laville, P.; Leonard, J.; Martin, R.; Massad, R.-S.; Moore, A.; Myrgiotis, V.; Pattey, E.; Rolinski, S.; Sharp, J.; Skiba, U.; Smith, W.; Wu, L.; Zhang, Q.; Bellocchi, G. |
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Title |
Ensemble modelling of carbon fluxes in grasslands and croplands |
Type |
Journal Article |
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Year |
2020 |
Publication |
Field Crops Research |
Abbreviated Journal |
Field Crops Research |
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Volume |
252 |
Issue |
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Pages |
107791 |
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Keywords |
C fluxes; croplands; grasslands; multi-model ensemble; multi-model; median (mmm); soil organic-carbon; greenhouse-gas emissions; climate-change impacts; crop model; data aggregation; use efficiency; n2o emissions; maize; yield; wheat; productivity |
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Abstract |
Croplands and grasslands are agricultural systems that contribute to land–atmosphere exchanges of carbon (C). We evaluated and compared gross primary production (GPP), ecosystem respiration (RECO), net ecosystem exchange (NEE) of CO2, and two derived outputs – C use efficiency (CUE=-NEE/GPP) and C emission intensity (IntC= -NEE/Offtake [grazed or harvested biomass]). The outputs came from 23 models (11 crop-specific, eight grassland-specific, and four models covering both systems) at three cropping sites over several rotations with spring and winter cereals, soybean and rapeseed in Canada, France and India, and two temperate permanent grasslands in France and the United Kingdom. The models were run independently over multi-year simulation periods in five stages (S), either blind with no calibration and initialization data (S1), using historical management and climate for initialization (S2), calibrated against plant data (S3), plant and soil data together (S4), or with the addition of C and N fluxes (S5). Here, we provide a framework to address methodological uncertainties and contextualize results. Most of the models overestimated or underestimated the C fluxes observed during the growing seasons (or the whole years for grasslands), with substantial differences between models. For each simulated variable, changes in the multi-model median (MMM) from S1 to S5 was used as a descriptor of the ensemble performance. Overall, the greatest improvements (MMM approaching the mean of observations) were achieved at S3 or higher calibration stages. For instance, grassland GPP MMM was equal to 1632 g C m−2 yr-1 (S5) while the observed mean was equal to 1763 m-2 yr-1 (average for two sites). Nash-Sutcliffe modelling efficiency coefficients indicated that MMM outperformed individual models in 92.3 % of cases. Our study suggests a cautious use of large-scale, multi-model ensembles to estimate C fluxes in agricultural sites if some site-specific plant and soil observations are available for model calibration. The further development of crop/grassland ensemble modelling will hinge upon the interpretation of results in light of the way models represent the processes underlying C fluxes in complex agricultural systems (grassland and crop rotations including fallow periods). |
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2020-06-08 |
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LiveM |
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MA @ admin @ |
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5230 |
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