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Brylińska, M.; Sobkowiak, S.; Stefańczyk, E.; Śliwka, J. |
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Title |
Potato cultivation system affects population structure of Phytophthora infestans |
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Journal Article |
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Year |
2016 |
Publication |
Fungal Ecology |
Abbreviated Journal |
Fungal Ecology |
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20 |
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Pages |
132-143 |
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Keywords |
SSR; Population genetic structure; Late blight; Potato; late blight resistance; mating-type; microsatellite markers; phenotypic diversity; sexual reproduction; genotypic diversity; nordic countries; severe outbreaks; sarpo mira; pathogenicity |
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Abstract |
Phytophthora infestans is one of the most destructive potato pathogens. Many factors influence the population structure of P. infestans, including migration, climate and type of potato cultivation. Here, we analyse 365 P. infestans isolates collected from three regions of Poland over three years. We determined mating type, mitochondrial haplotype, resistance to metalaxyl, virulence and polymorphism at 14 simple sequence repeat (SSR) loci. Analysis of SSR markers showed high genetic diversity associated with this population. Model-based structure analysis grouped 299 unique genotypes into four main clusters. The P. infestans isolates collected from the Mlochow region, which has the most intensive level of potato cultivation, formed a distinct cluster, indicating a strong effect of the cultivation system on pathogen population structure. Three clusters contained isolates with frequent presence of three alleles at one locus, which may affect their capacity for sexual reproduction and preserve groups of fit genotypes that propagate asexually. (C) 2016 Elsevier Ltd and The British Mycological Society. |
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1754-5048 |
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CropM, ft_macsur |
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MA @ admin @ |
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4720 |
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Reidsma, P.; Wolf, J.; Kanellopoulos, A.; Schaap, B.F.; Mandryk, M.; Verhagen, J.; van Ittersum, M.K. |
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Title |
Climate change impact and adaptation research requires integrated assessment and farming systems analysis: a case study in the Netherlands |
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Journal Article |
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Year |
2015 |
Publication |
Environmental Research Letters |
Abbreviated Journal |
Environ. Res. Lett. |
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10 |
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4 |
Pages |
045004 |
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Keywords |
climate change adaptation; scenario; farm diversity; crop simulation; bio-economic farm modelling; european-union; crop yields; agriculture; responses; models; wheat; variability; improvement; strategies; scenarios |
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Abstract |
Rather than on crop modelling only, climate change impact assessments in agriculture need to be based on integrated assessment and farming systems analysis, and account for adaptation at different levels. With a case study for Flevoland, the Netherlands, we illustrate that (1) crop models cannot account for all relevant climate change impacts and adaptation options, and (2) changes in technology, policy and prices have had and are likely to have larger impacts on farms than climate change. While crop modelling indicates positive impacts of climate change on yields of major crops in 2050, a semi-quantitative and participatory method assessing impacts of extreme events shows that there are nevertheless several climate risks. A range of adaptation measures are, however, available to reduce possible negative effects at crop level. In addition, at farm level farmers can change cropping patterns, and adjust inputs and outputs. Also farm structural change will influence impacts and adaptation. While the 5th IPCC report is more negative regarding impacts of climate change on agriculture compared to the previous report, also for temperate regions, our results show that when putting climate change in context of other drivers, and when explicitly accounting for adaptation at crop and farm level, impacts may be less negative in some regions and opportunities are revealed. These results refer to a temperate region, but an integrated assessment may also change perspectives on climate change for other parts of the world. |
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1748-9326 |
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CropM, ftnotmacsur |
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MA @ admin @ |
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4649 |
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