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Sharif, B.; Makowski, D.; Plauborg, F.; Olesen, J.E. |
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Title |
Comparison of regression techniques to predict response of oilseed rape yield to variation in climatic conditions in Denmark |
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Journal Article |
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Year |
2017 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
Europ. J. Agron. |
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Volume |
82 |
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Pages |
11-20 |
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Keywords |
Winter oilseed rape; Statistical models; Yield; Climate; Regression |
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Abstract |
Highlights • Regularization techniques for regression outperformed the classical regression techniques in predicting crop yields. • Different regression techniques with similar prediction accuracy showed different responses of major climatic variables to crop yield. • The regression models showed some responses of crop yield to climatic conditions that is mostly absent in process based crop models. Abstract Statistical regression models represent alternatives to process-based dynamic models for predicting the response of crop yields to variation in climatic conditions. Regression models can be used to quantify the effect of change in temperature and precipitation on yields. However, it is difficult to identify the most relevant input variables that should be included in regression models due to the high number of candidate variables and to their correlations. This paper compares several regression techniques for modeling response of winter oilseed rape yield to a high number of correlated input variables. Several statistical regression methods were fitted to a dataset including 689 observations of winter oilseed rape yield from replicated field experiments conducted in 239 sites in Denmark, covering nearly all regions of the country from 1992 to 2013. Regression methods were compared by cross-validation. The regression methods leading to the most accurate yield predictions were Lasso and Elastic Net, and the least accurate methods were ordinary least squares and stepwise regression. Partial least squares and ridge regression methods gave intermediate results. The estimated relative yield change for a +1°C temperature increase during flowering was estimated to range between 0 and +6 %, depending on choice of regression method. Precipitation was found to have an adverse effect on yield during autumn and winter. It was estimated that an increase in precipitation of +1 mm/day would result in a relative yield change ranging from 0 to −4 %. Soil type was also important for crop yields with lower yields on sandy soils compared to loamy soils. Later sowing was found to result in increased crop yield. The estimated effect of climate on yield was highly sensitive to the chosen regression method. Regression models showing similar performance led in some cases to different conclusions with respect to effect of temperature and precipitation. Hence, it is recommended to apply an ensemble of regression models, in order to account for the sensitivity of the data driven models for projecting crop yield under climate change. |
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1161-0301 |
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CropM, ft_macsur |
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MA @ admin @ |
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4966 |
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Raymundo, R.; Asseng, S.; Prassad, R.; Kleinwechter, U.; Concha, J.; Condori, B.; Bowen, W.; Wolf, J.; Olesen, J.E.; Dong, Q.; Zotarelli, L.; Gastelo, M.; Alva, A.; Travasso, M.; Quiroz, R.; Arora, V.; Graham, W.; Porter, C. |
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Title |
Performance of the SUBSTOR-potato model across contrasting growing conditions |
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Journal Article |
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Year |
2017 |
Publication |
Field Crops Research |
Abbreviated Journal |
Field Crops Research |
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Volume |
202 |
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Pages |
57-76 |
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0378-4290 |
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CropM, ftnotmacsur |
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MA @ admin @ |
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4967 |
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Fleisher, D.H.; Condori, B.; Quiroz, R.; Alva, A.; Asseng, S.; Barreda, C.; Bindi, M.; Boote, K.J.; Ferrise, R.; Franke, A.C.; Govindakrishnan, P.M.; Harahagazwe, D.; Hoogenboom, G.; Naresh Kumar, S.; Merante, P.; Nendel, C.; Olesen, J.E.; Parker, P.S.; Raes, D.; Raymundo, R.; Ruane, A.C.; Stockle, C.; Supit, I.; Vanuytrecht, E.; Wolf, J.; Woli, P. |
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Title |
A potato model intercomparison across varying climates and productivity levels |
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Journal Article |
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Year |
2017 |
Publication |
Global Change Biology |
Abbreviated Journal |
Glob. Chang. Biol. |
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Volume |
23 |
Issue |
3 |
Pages |
1258-1281 |
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A potato crop multimodel assessment was conducted to quantify variation among models and evaluate responses to climate change. Nine modeling groups simulated agronomic and climatic responses at low-input (Chinoli, Bolivia and Gisozi, Burundi)- and high-input (Jyndevad, Denmark and Washington, United States) management sites. Two calibration stages were explored, partial (P1), where experimental dry matter data were not provided, and full (P2). The median model ensemble response outperformed any single model in terms of replicating observed yield across all locations. Uncertainty in simulated yield decreased from 38% to 20% between P1 and P2. Model uncertainty increased with interannual variability, and predictions for all agronomic variables were significantly different from one model to another (P < 0.001). Uncertainty averaged 15% higher for low- vs. high-input sites, with larger differences observed for evapotranspiration (ET), nitrogen uptake, and water use efficiency as compared to dry matter. A minimum of five partial, or three full, calibrated models was required for an ensemble approach to keep variability below that of common field variation. Model variation was not influenced by change in carbon dioxide (C), but increased as much as 41% and 23% for yield and ET, respectively, as temperature (T) or rainfall (W) moved away from historical levels. Increases in T accounted for the highest amount of uncertainty, suggesting that methods and parameters for T sensitivity represent a considerable unknown among models. Using median model ensemble values, yield increased on average 6% per 100-ppm C, declined 4.6% per °C, and declined 2% for every 10% decrease in rainfall (for nonirrigated sites). Differences in predictions due to model representation of light utilization were significant (P < 0.01). These are the first reported results quantifying uncertainty for tuber/root crops and suggest modeling assessments of climate change impact on potato may be improved using an ensemble approach. |
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1354-1013 |
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CropM, ftnotmacsur |
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MA @ admin @ |
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4968 |
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Wang, E.; Martre, P.; Zhao, Z.; Ewert, F.; Maiorano, A.; Rötter, R.P.; Kimball, B.A.; Ottman, M.J.; Wall, G.W.; White, J.W.; Reynolds, M.P.; Alderman, P.D.; Aggarwal, P.K.; Anothai, J.; Basso, B.; Biernath, C.; Cammarano, D.; Challinor, A.J.; De Sanctis, G.; Doltra, J.; Fereres, E.; Garcia-Vila, M.; Gayler, S.; Hoogenboom, G.; Hunt, L.A.; Izaurralde, R.C.; Jabloun, M.; Jones, C.D.; Kersebaum, K.C.; Koehler, A.-K.; Liu, L.; Müller, C.; Naresh Kumar, S.; Nendel, C.; O’Leary, G.; Olesen, J.E.; Palosuo, T.; Priesack, E.; Eyshi Rezaei, E.; Ripoche, D.; Ruane, A.C.; Semenov, M.A.; Shcherbak, I.; Stöckle, C.; Stratonovitch, P.; Streck, T.; Supit, I.; Tao, F.; Thorburn, P.; Waha, K.; Wallach, D.; Wang, Z.; Wolf, J.; Zhu, Y.; Asseng, S. |
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Title |
The uncertainty of crop yield projections is reduced by improved temperature response functions |
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Journal Article |
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Year |
2017 |
Publication |
Nature Plants |
Abbreviated Journal |
Nature Plants |
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Volume |
3 |
Issue |
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Pages |
17102 |
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Increasing the accuracy of crop productivity estimates is a key element in planning adaptation strategies to ensure global food security under climate change. Process-based crop models are effective means to project climate impact on crop yield, but have large uncertainty in yield simulations. Here, we show that variations in the mathematical functions currently used to simulate temperature responses of physiological processes in 29 wheat models account for >50% of uncertainty in simulated grain yields for mean growing season temperatures from 14 °C to 33 °C. We derived a set of new temperature response functions that when substituted in four wheat models reduced the error in grain yield simulations across seven global sites with different temperature regimes by 19% to 50% (42% average). We anticipate the improved temperature responses to be a key step to improve modelling of crops under rising temperature and climate change, leading to higher skill of crop yield projections. Erratum: doi: 10.1038/nplants.2017.125 |
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2017-08-28 |
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CropM, ft_macsur |
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MA @ admin @ |
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5173 |
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Webber, H.; White, J.W.; Kimball, B.A.; Ewert, F.; Asseng, S.; Rezaei, E.E.; Pinter, P.J., Jr.; Hatfield, J.L.; Reynolds, M.P.; Ababaei, B.; Bindi, M.; Doltra, J.; Ferrise, R.; Kage, H.; Kassie, B.T.; Kersebaum, K.-C.; Luig, A.; Olesen, J.E.; Semenov, M.A.; Stratonovitch, P.; Ratjen, A.M.; LaMorte, R.L.; Leavitt, S.W.; Hunsaker, D.J.; Wall, G.W.; Martre, P. |
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Physical robustness of canopy temperature models for crop heat stress simulation across environments and production conditions |
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Journal Article |
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Year |
2018 |
Publication |
Field Crops Research |
Abbreviated Journal |
Field Crops Research |
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216 |
Issue |
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75-88 |
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Keywords |
Heat stress; Crop model improvement; Heat and drought interactions; Climate change impact assessments; Canopy temperature; Wheat; Air CO2 Enrichment; Elevated Carbon-Dioxide; Water-Use Efficiency; Climate-Change; Wheat Evapotranspiration; Stomatal Conductance; Multimodel Ensembles; Farming Systems; Drought-Stress; Spring Wheat |
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Despite widespread application in studying climate change impacts, most crop models ignore complex interactions among air temperature, crop and soil water status, CO2 concentration and atmospheric conditions that influence crop canopy temperature. The current study extended previous studies by evaluating Tc simulations from nine crop models at six locations across environmental and production conditions. Each crop model implemented one of an empirical (EMP), an energy balance assuming neutral stability (EBN) or an energy balance correcting for atmospheric stability conditions (EBSC) approach to simulate Tc. Model performance in predicting Tc was evaluated for two experiments in continental North America with various water, nitrogen and CO2 treatments. An empirical model fit to one dataset had the best performance, followed by the EBSC models. Stability conditions explained much of the differences between modeling approaches. More accurate simulation of heat stress will likely require use of energy balance approaches that consider atmospheric stability conditions. |
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2018-02-19 |
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English |
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0378-4290 |
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CropM, ft_macsur |
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MA @ admin @ |
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5189 |
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