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Potopová, V. |
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Observed and simulated growth, development and yield of field-grown tomato in the Elbe lowland, the Czech Republic |
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2015 |
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FACCE MACSUR Reports |
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5 |
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Sp5-47 |
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This study deals with observed and simulated growth, development and yield of the fresh-market Thomas F1 tomato bush cultivar (Solanum lycopersicum L.) grown under open field conditions at farm scale in the Elbe lowland. The CROPGRO-Tomato model used in this study is part of the DSSAT V4.5 software. The model has been calibrated with growth analyses data from field experiments, agronomic evidence (GC UPRAVY software) and the most currently available data from the literature sources of cardinal temperatures for tomato phenology, fruit growth and photosynthesis (Tb – base temperature; Topt1 – the lowest temperature at which maximum rate is attained; Topt2 – the upper temperature at which maximum rate is sustained; Tmax – maximum temperature). The sampling plants were collected a once 14 days for analysis of basic physiological parameters: LAI (Leaf area index), LAR (Leaf Area Ratio), C (Crop Growth Rate), RGRw (Relative Growth Rate) and NAR (Net Assimilation Rate). Phenology observation was done weakly. Meteorological, soil and agro-technical parameters across the fields were monitored. The treatments were well-irrigated and well-fertilised, and therefore, no water or N stress was present.Parameters affecting leaf growth, dry biomass productions, and dry biomass of leaves, stem and generative organs from planting to harvest were calibrated against the observed data. Phenological development and growth processes such as leaf expansion and fruit growth depend on cardinal temperatures. Leaf area expansion depends on the new leaf mas produced and specific leaf area, which is influenced by light, temperature, root N uptake, and plant water status. Starting date for the simulation corresponds with transplanting date of the crop in the field, which was set at day 141. The simulation period ended at day 273, a reasonable estimate for the date when plants are stopped in practice. Initial input dry biomass at Mochov farm (Suchdol) was set to 2.25 (2.88), 1.71 (2.5) and 0.01 (0.78) grams for leaves, stem and generative organs, respectively. No Label |
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MACSUR Science Conference 2015 »Integrated Climate Risk Assessment in Agriculture & Food«, 8–9+10 April 2015, Reading, UK |
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MA @ admin @ |
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2162 |
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Comadira, G.; Rasool, B.; Karpinska, B.; Morris, J.; Verrall, S.R.; Hedley, P.E.; Foyer, C.H.; Hancock, R.D. |
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Title |
Nitrogen deficiency in barley (Hordeum vulgare) seedlings induces molecular and metabolic adjustments that trigger aphid resistance |
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Journal Article |
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2015 |
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Journal of Experimental Botany |
Abbreviated Journal |
J. Experim. Bot. |
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66 |
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12 |
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3639-3655 |
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Animals; Aphids/drug effects/*physiology; Biomass; Carbon/pharmacology; Chlorophyll/metabolism; Cluster Analysis; *Disease Resistance/drug effects; Gases/metabolism; Gene Expression Regulation, Plant/drug effects; Hordeum/drug effects/genetics/*parasitology; Nitrogen/*deficiency/metabolism/pharmacology; Oxidation-Reduction/drug effects; Photosynthesis/drug effects; Plant Diseases/genetics/*parasitology; Plant Leaves/drug effects/genetics/metabolism; Plant Proteins/genetics/metabolism; Plant Shoots/drug effects/metabolism; RNA, Messenger/genetics/metabolism; Secondary Metabolism/drug effects; Seedlings/drug effects/*metabolism/*parasitology; Signal Transduction/drug effects; Thylakoids/drug effects/metabolism/parasitology; Transcription Factors/metabolism; Transcriptome/genetics; Cross-tolerance; Myzus persicae; kinase cascades; metabolite profiles; nitrogen limitation; oxidative stress; sugar signalling |
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Agricultural nitrous oxide (N2O) pollution resulting from the use of synthetic fertilizers represents a significant contribution to anthropogenic greenhouse gas emissions, providing a rationale for reduced use of nitrogen (N) fertilizers. Nitrogen limitation results in extensive systems rebalancing that remodels metabolism and defence processes. To analyse the regulation underpinning these responses, barley (Horedeum vulgare) seedlings were grown for 7 d under N-deficient conditions until net photosynthesis was 50% lower than in N-replete controls. Although shoot growth was decreased there was no evidence for the induction of oxidative stress despite lower total concentrations of N-containing antioxidants. Nitrogen-deficient barley leaves were rich in amino acids, sugars and tricarboxylic acid cycle intermediates. In contrast to N-replete leaves one-day-old nymphs of the green peach aphid (Myzus persicae) failed to reach adulthood when transferred to N-deficient barley leaves. Transcripts encoding cell, sugar and nutrient signalling, protein degradation and secondary metabolism were over-represented in N-deficient leaves while those associated with hormone metabolism were similar under both nutrient regimes with the exception of mRNAs encoding proteins involved in auxin metabolism and responses. Significant similarities were observed between the N-limited barley leaf transcriptome and that of aphid-infested Arabidopsis leaves. These findings not only highlight significant similarities between biotic and abiotic stress signalling cascades but also identify potential targets for increasing aphid resistance with implications for the development of sustainable agriculture. |
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2016-10-31 |
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0022-0957 1460-2431 |
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CropM |
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MA @ admin @ |
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4787 |
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Martre, P.; Wallach, D.; Asseng, S.; Ewert, F.; Jones, J.W.; Rötter, R.P.; Boote, K.J.; Ruane, A.C.; Thorburn, P.J.; Cammarano, D.; Hatfield, J.L.; Rosenzweig, C.; Aggarwal, P.K.; Angulo, C.; Basso, B.; Bertuzzi, P.; Biernath, C.; Brisson, N.; Challinor, A.J.; Doltra, J.; Gayler, S.; Goldberg, R.; Grant, R.F.; Heng, L.; Hooker, J.; Hunt, L.A.; Ingwersen, J.; Izaurralde, R.C.; Kersebaum, K.C.; Müller, C.; Kumar, S.N.; Nendel, C.; O’Leary, G.; Olesen, J.E.; Osborne, T.M.; Palosuo, T.; Priesack, E.; Ripoche, D.; Semenov, M.A.; Shcherbak, I.; Steduto, P.; Stöckle, C.O.; Stratonovitch, P.; Streck, T.; Supit, I.; Tao, F.; Travasso, M.; Waha, K.; White, J.W.; Wolf, J. |
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Multimodel ensembles of wheat growth: many models are better than one |
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Journal Article |
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2015 |
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Global Change Biology |
Abbreviated Journal |
Glob. Chang. Biol. |
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21 |
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2 |
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911-925 |
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Climate; Climate Change; Environment; *Models, Biological; Seasons; Triticum/*growth & development; ecophysiological model; ensemble modeling; model intercomparison; process-based model; uncertainty; wheat (Triticum aestivum L.) |
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Crop models of crop growth are increasingly used to quantify the impact of global changes due to climate or crop management. Therefore, accuracy of simulation results is a major concern. Studies with ensembles of crop models can give valuable information about model accuracy and uncertainty, but such studies are difficult to organize and have only recently begun. We report on the largest ensemble study to date, of 27 wheat models tested in four contrasting locations for their accuracy in simulating multiple crop growth and yield variables. The relative error averaged over models was 24-38% for the different end-of-season variables including grain yield (GY) and grain protein concentration (GPC). There was little relation between error of a model for GY or GPC and error for in-season variables. Thus, most models did not arrive at accurate simulations of GY and GPC by accurately simulating preceding growth dynamics. Ensemble simulations, taking either the mean (e-mean) or median (e-median) of simulated values, gave better estimates than any individual model when all variables were considered. Compared to individual models, e-median ranked first in simulating measured GY and third in GPC. The error of e-mean and e-median declined with an increasing number of ensemble members, with little decrease beyond 10 models. We conclude that multimodel ensembles can be used to create new estimators with improved accuracy and consistency in simulating growth dynamics. We argue that these results are applicable to other crop species, and hypothesize that they apply more generally to ecological system models. |
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1354-1013 |
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CropM, ftnotmacsur |
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MA @ admin @ |
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4665 |
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Baranowski, P.; Krzyszczak, J.; Slawinski, C.; Hoffmann, H.; Kozyra, J.; Nieróbca, A.; Siwek, K.; Gluza, A. |
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Multifractal analysis of meteorological time series to assess climate impacts |
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2015 |
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Climate Research |
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Clim. Res. |
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65 |
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39-52 |
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multifractal analysis; time series; agro-meteorological parameters; detrended fluctuation analysis; daily temperature records; catalonia ne spain; fractal analysis; river-basin; precipitation; variability; patterns; trends; china |
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Agro-meteorological quantities are often in the form of time series, and knowledge about their temporal scaling properties is fundamental for transferring locally measured fluctuations to larger scales and vice versa. However, the scaling analysis of these quantities is complicated due to the presence of localized trends and nonstationarities. The objective of this study was to characterise scaling properties (i.e. statistical self-similarity) of the chosen agro-meteorological quantities through multifractal detrended fluctuation analysis (MFDFA). For this purpose, MFDFA was performedwith 11 322 measured time series (31 yr) of daily air temperature, wind velocity, relative air humidity, global radiation and precipitation from stations located in Finland, Germany, Poland and Spain. The empirical singularity spectra indicated their multifractal structure. The richness of the studied multifractals was evaluated by the width of their spectrum, indicating considerable differences in dynamics and development. In log-log plots of the cumulative distributions of all meteorological parameters the linear functions prevailed for high values of the response, indicating that these distributions were consistent with power-law asymptotic behaviour. Additionally, we investigated the type of multifractality that underlies the q-dependence of the generalized Hurst exponent by analysing the corresponding shuffled and surrogate time series. For most of the studied meteorological parameters, the multifractality is due to different long-range correlations for small and large fluctuations. Only for precipitation does the multifractality result mainly from broad probability function. This feature may be especially valuable for assessing the effect of change in climate dynamics. |
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0936-577x 1616-1572 |
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CropM, ft_macsur |
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MA @ admin @ |
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4666 |
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Author |
Baranowski, P. |
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Multifractal analysis of meteorological time series to assess climate impact on chosen regions of Europe |
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2015 |
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FACCE MACSUR Reports |
Abbreviated Journal |
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5 |
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Sp5-4 |
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Over the last decades modelling of climate change through the analysis of empirical meteorological data has become of great interest. The standard approach gives satisfactory results only in the climatic zones with extreme dynamics of climate change, thus there is need to develop and apply more subtle methods such as fractal analysis and chaotic evolution analysis of the atmospheric system. The scaling analysis of meteorological time series is complicated because of the presence of localized trends and nonstationarities. The objective of this study was to characterize scaling properties (i.e. statistical self-similarity) of the daily air temperature, wind velocity, relative air humidity, global radiation and precipitation through multifractal detrended fluctuation analysis on data from 31 years for stations located in Finland, Germany, Poland and Spain. The empirical singularity spectra indicated their multifractal structure. The richness of the studied multifractals was evaluated by the width of their spectrum, indicating considerable differences in dynamics and development. The log-log plots of the cumulative distributions of all the studied absolute and normalized meteorological parameters tended to linear functions for high values of the response, indicating that these distributions were consistent with the power law asymptotic behaviour. Additionally, we investigated the type of multifractality that underlies the q-dependence of the generalized Hurst exponent, by analysing the corresponding shuffled and surrogate time series. The results suggest that MFDFA is valuable for assessing the change of climate dynamics. No Label |
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MACSUR Science Conference 2015 »Integrated Climate Risk Assessment in Agriculture & Food«, 8–9+10 April 2015, Reading, UK |
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MA @ admin @ |
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2119 |
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