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Tao, F.; Roetter, R.P.; Palosuo, T.; Diaz-Ambrona, C.G.H.; Ines Minguez, M.; Semenov, M.A.; Kersebaum, K.C.; Nendel, C.; Cammarano, D.; Hoffmann, H.; Ewert, F.; Dambreville, A.; Martre, P.; Rodriguez, L.; Ruiz-Ramos, M.; Gaiser, T.; Hohn, J.G.; Salo, T.; Ferrise, R.; Bindi, M.; Schulman, A.H. |
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Title  |
Designing future barley ideotypes using a crop model ensemble |
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Journal Article |
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Year |
2017 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
Europ. J. Agron. |
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82 |
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144-162 |
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Keywords |
Water-Use Efficiency; Climate-Change; Nitrogen Dynamics; Systems; Simulation; Wheat Cultivars; Grain Weight; Yield; Growth; Fertilization; Adaptation; Adaptation; Breeding; Climate change; Crop simulation models; Impact; Genotype; Genetic traits |
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Abstract |
Climate change and its associated higher frequency and severity of adverse weather events require genotypic adaptation. Process-based ecophysiological modelling offers a powerful means to better target and accelerate development of new crop cultivars. Barley (Hordeum vulgare L) is an important crop throughout the world, and a good model for study of the genetics of stress adaptation because many quantitative trait loci and candidate genes for biotic and abiotic stress tolerance have been identified in it. Here, we developed a new approach to design future crop ideotypes using an ensemble of eight barley simulation models (i.e. APSIM, CropSyst, HERMES, MCWLA, MONICA, SIMPLACE, Sirius Quality, and WOFOST), and applied it to design climate-resilient barley ideotypes for Boreal and Mediterranean climatic zones in Europe. The results showed that specific barley genotypes, represented by sets of cultivar parameters in the crop models, could be promising under future climate change conditions, resulting in increased yields and low inter-annual yield variability. In contrast, other genotypes could result in substantial yield declines. The most favorable climate-zone-specific barley ideotypes were further proposed, having combinations of several key genetic traits in terms of phenology, leaf growth, photosynthesis, drought tolerance, and grain formation. For both Boreal and Mediterranean climatic zones, barley ideotypes under future climatic conditions should have a longer reproductive growing period, lower leaf senescence rate, larger radiation use efficiency or maximum assimilation rate, and higher drought tolerance. Such characteristics can produce substantial positive impacts on yields under contrasting conditions. Moreover, barley ideotypes should have a low photoperiod and high vernalization sensitivity for the Boreal climatic zone; for the Mediterranean, in contrast, it should have a low photoperiod and low vernalization sensitivity. The drought-tolerance trait is more beneficial for the Mediterranean than for the Boreal climatic zone. Our study demonstrates a sound approach to design future barley ideotypes based on an ensemble of well-tested, diverse crop models and on integration of knowledge from multiple disciplines. The robustness of model-aided ideotypes design can be further enhanced by continuously improving crop models and enhancing information exchange between modellers, agro-meteorologists, geneticists, physiologists, and plant breeders. (C) 2016 Elsevier B.V. All rights reserved. |
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2017-01-20 |
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1161-0301 |
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CropM, ft_MACSUR |
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MA @ admin @ |
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4935 |
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Rötter, P.; Palosuo, T.; Semenov, M.; Ruiz-Ramos, M.; Tao, F.; Fronzek, S.; Pirttioja, K.; Bindi, M.; Carter, R.; Hoffmann, H.; Höhn, J.; Kersebaum, C.; Trnka, M. |
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Title |
Designing new cereal cultivars as an adaptation measure using crop model ensembles |
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Conference Article |
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Year |
2014 |
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CropM |
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MACSUR CropM International Symposium and Workshop: Modelling climate change impacts on crop production for food security, Oslo, Norway, 2014-02-10 to 2014-02-12 |
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MA @ admin @ |
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2768 |
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Author |
Ghaley, B.B.; Porter, J.R. |
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Title |
Determination of biomass accumulation in mixed belts of Salix, Corylus and Alnus species in combined food and energy production system |
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Journal Article |
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Year |
2014 |
Publication |
Biomass and Bioenergy |
Abbreviated Journal |
Biomass and Bioenergy |
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63 |
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86-91 |
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Keywords |
allometric equation; destructive and non-destructive method; stool and biomass yield; bio-energy belts; food and fodder crops; short rotation woody crops; short-rotation forestry; willow; plantations; sweden; coppice; equations; growth; poplar; trees; yield |
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Abstract |
Given the energetic, demographic and the climatic challenges faced today, we designed a combined food and energy (CFE) production system integrating food, fodder and mixed belts of Salix, Alnus and Corylus sp. as bioenergy belts. The objective was to assess the shoot dry weight-stem diameter allometric relationship based on stem diameter at 10 (SD10) and 55 cm (SD55) from the shoot base in the mixed bioenergy belts. Allometric relations based on SD10 and SD55 explained 90-96% and 90-98% of the variation in shoot dry weights respectively with no differences between the destructive and the non-destructive methods. The individual stool yields varied widely among the species and within willow species with biomass yield range of 37.60-92.00 oven dry tons (ODT) ha (1) in 4-year growth cycle. The biomass yield of the bioenergy belt, predicted by allometric relations was 48.84 ODT ha 1 in 4-year growth cycle corresponding to 12.21 ODT ha (1) year (1). The relatively high biomass yield is attributed to the border effects and the ‘fertilizing effect’ of alder due to nitrogen fixation, benefitting other SWRC components. On termination of 4-year growth cycle, the bioenergy belts were harvested and the biomass yield recorded was 12.54 ODT ha (1) year (1), in close proximity to the biomass yield predicted by the allometric equations, lending confidence and robustness of the model for biomass yield determination in such integrated agro-ecosystem. (C) 2014 Elsevier Ltd. All rights reserved. |
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0961-9534 |
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CropM |
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MA @ admin @ |
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4624 |
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Rötter, R.P.; Semenov, M.A. |
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Title |
Development of methods for the probabilistic assessment of climate change impacts on crop production |
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Report |
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Year |
2014 |
Publication |
FACCE MACSUR Reports |
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3 |
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D-C4.4.1 |
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Various attempts have been made to determine the relative importance of uncertainties in climate change impact assessments stemming from climate projections and crop models, respectively, and to analyse yield outputs probabilistically. For example, in the ENSEMBLES project, probabilistic climate projections (Harris et al. 2010) have been applied in conjunction with impact response surfaces (IRS), constructed by using impact models, to estimate the future likelihood (risk) of exceeding critical thresholds of crop yield impact (see, Fronzek et al., 2011, for an explanation of the method). In this task, we aimed to further develop and operationalize these methods and testing them in different case study regions in Europe. The method combines results of a sensitivity analysis of (one or more) impact model(s) with probabilistic projections of future temperature and precipitation (Fronzek et al., 2011). Such an overlay is one way of portraying probabilistic estimates of future impacts. By further accounting for the uncertainties in crop and biophysical parameters (using perturbed parameter approaches), the outcome represents an ensemble of impact risk estimates, encapsulating both climate and crop model uncertainties. No Label |
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MA @ admin @ |
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2233 |
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Author |
Hidy, D.; Barcza, Z.; Haszpra, L.; Churkina, G.; Pintér, K.; Nagy, Z. |
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Title |
Development of the Biome-BGC model for simulation of managed herbaceous ecosystems |
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Journal Article |
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Year |
2012 |
Publication |
Ecological Modelling |
Abbreviated Journal |
Ecol. Model. |
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226 |
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99-119 |
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Keywords |
biogeochemical model; biome-bgc; grassland; management; soil moisture; bayesian calibration; carbon flux model; regional applications; bayesian calibration; use efficiency; general-model; exchange; balance; climate; grassland; variability |
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Apart from measurements, numerical models are the most convenient instruments to analyze the carbon and water balance of terrestrial ecosystems and their interactions with changing environmental conditions. The process-based Biome-BGC model is widely used to simulate the storage and flux of water, carbon, and nitrogen within the vegetation, litter, and soil of unmanaged terrestrial ecosystems. Considering herbaceous vegetation related simulations with Biome-BGC, soil moisture and growing season control on ecosystem functioning is inaccurate due to the simple soil hydrology and plant phenology representation within the model. Consequently, Biome-BGC has limited applicability in herbaceous ecosystems because (1) they are usually managed; (2) they are sensitive to soil processes, most of all hydrology; and (3) their carbon balance is closely connected with the growing season length. Our aim was to improve the applicability of Biome-BGC for managed herbaceous ecosystems by implementing several new modules, including management. A new index (heatsum growing season index) was defined to accurately estimate the first and the final days of the growing season. Instead of a simple bucket soil sub-model, a multilayer soil sub-model was implemented, which can handle the processes of runoff, diffusion and percolation. A new module was implemented to simulate the ecophysiological effect of drought stress on plant mortality. Mowing and grazing modules were integrated in order to quantify the functioning of managed ecosystems. After modifications, the Biome-BGC model was calibrated and validated using eddy covariance-based measurement data collected in Hungarian managed grassland ecosystems. Model calibration was performed based on the Bayes theorem. As a result of these developments and calibration, the performance of the model was substantially improved. Comparison with measurement-based estimate showed that the start and the end of the growing season are now predicted with an average accuracy of 5 and 4 days instead of 46 and 85 days as in the original model. Regarding the different sites and modeled fluxes (gross primary production, total ecosystem respiration, evapotranspiration), relative errors were between 18-60% using the original model and 10-18% using the developed model; squares of the correlation coefficients were between 0.02-0.49 using the original model and 0.50-0.81 using the developed model. (c) 2011 Elsevier B.V. All rights reserved. |
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0304-3800 |
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LiveM |
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MA @ admin @ |
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4472 |
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