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Lorite, I.J.; García-Vila, M.; Santos, C.; Ruiz-Ramos, M.; Fereres, E. |
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Title  |
AquaData and AquaGIS: Two computer utilities for temporal and spatial simulations of water-limited yield with AquaCrop |
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Journal Article |
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Year |
2013 |
Publication |
Computers and Electronics in Agriculture |
Abbreviated Journal |
Computers and Electronics in Agriculture |
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Volume |
96 |
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Pages |
227-237 |
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Keywords |
software tool; aquacrop; crop simulation model; geographic information system; spatial aggregation; fao crop model; irrigation management; iberian peninsula; southern spain; climate models; impacts; program; europe; system |
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The crop simulation model AquaCrop, recently developed by FAO can be used for a wide range of purposes. However, in its present form, its use over large areas or for applications that require a large number of simulations runs (e.g., long-term analysis), is not practical without developing software to facilitate such applications. Two tools for managing the inputs and outputs of AquaCrop, named AquaData and AquaGIS, have been developed for this purpose and are presented here. Both software utilities have been programmed in Delphi v. 5 and in addition, AquaGIS requires the Geographic Information System (GIS) programming tool MapObjects. These utilities allow the efficient management of input and output files, along with a GIS module to develop spatial analysis and effect spatial visualization of the results, facilitating knowledge dissemination. A sample of application of the utilities is given here, as an AquaCrop simulation analysis of impact of climate change on wheat yield in Southern Spain, which requires extensive input data preparation and output processing. The use of AquaCrop without the two utilities would have required approximately 1000 h of work, while the utilization of AquaData and AquaGIS reduced that time by more than 99%. Furthermore, the use of GIS, made it possible to perform a spatial analysis of the results, thus providing a new option to extend the use of the AquaCrop model to scales requiring spatial and temporal analyses. (C) 2013 Elsevier B.V. All rights reserved. |
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0168-1699 |
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CropM |
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MA @ admin @ |
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4609 |
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Kanellopoulos, A.; Reidsma, P.; Wolf, J.; van Ittersum, M.K. |
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Assessing climate change and associated socio-economic scenarios for arable farming in the Netherlands: An application of benchmarking and bio-economic farm modelling |
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Journal Article |
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Year |
2014 |
Publication |
European Journal of Agronomy |
Abbreviated Journal |
European Journal of Agronomy |
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52 |
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69-80 |
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Keywords |
integrated assessment; data envelopment analysis; farm adaptation; farm model; technical efficiency; agricultural land-use; integrated assessment; european-community; future; crop; efficiency; impacts; systems |
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Abstract |
Future farming systems are challenged to adapt to the changing socio-economic and bio-physical environment in order to remain competitive and to meet the increasing requirements for food and fibres. The scientific challenge is to evaluate the consequences of predefined scenarios, identify current “best” practices and explore future adaptation strategies at farm level. The objective of this article is to assess the impact of different climate change and socio-economic scenarios on arable farming systems in Flevoland (the Netherlands) and to explore possible adaptation strategies. Data Envelopment Analysis was used to identify these current “best” practices while bio-economic modelling was used to calculate a number of important economic and environmental indicators in scenarios for 2050. Relative differences between yields with and without climate change and technological change were simulated with a crop bio-physical model and used as a correction factors for the observed crop yields of current “best” practices. We demonstrated the capacity of the proposed methodology to explore multiple scenarios by analysing the importance of drivers of change, while accounting for variation between individual farms. It was found that farmers in Flevoland are in general technically efficient and a substantial share of the arable land is currently under profit maximization. We found that climate change increased productivity in all tested scenarios. However, the effects of different socio-economic scenarios (globalized and regionalized economies) on the economic and environmental performance of the farms were variable. Scenarios of a globalized economy where the prices of outputs were simulated to increase substantially might result in increased average gross margin and lower average (per ha) applications of crop protection and fertilizers. However, the effects might differ between different farm types. It was found that, the abolishment of sugar beet quota and changes of future prices of agricultural inputs and outputs in such socio-economic scenario (i.e. globalized economy) caused a decrease in gross margins of smaller (in terms of economic size) farms, while gross margin of larger farms increased. In scenarios where more regionalized economies and a moderate climate change are assumed, the future price ratios between inputs and outputs are shown to be the key factors for the viability of arable farms in our simulations. (C) 2013 Elsevier B.V. All rights reserved. |
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1161-0301 |
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CropM |
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MA @ admin @ |
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4526 |
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Savary, S.; Jouanin, C.; Félix, I.; Gourdain, E.; Piraux, F.; Brun, F.; Willocquet, L. |
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Title |
Assessing plant health in a network of experiments on hardy winter wheat varieties in France: patterns of disease-climate associations |
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Journal Article |
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2016 |
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European Journal of Plant Pathology |
Abbreviated Journal |
Eur. J. Plant Pathol. |
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146 |
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741-755 |
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Keywords |
Puccinia triticina; Puccinia striiformis; Fusarium graminearum; Fusarium culmorum; Fusarium avenaceum; Blumeria graminis; Zymoseptoria tritici; Categorical data; Risk factor; Multiple pathosystem; Correspondence analysis; Logistic regression |
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A data set generated by a multi-year (2003–2010) and multi-site network of experiments on winter wheat varieties grown at different levels of crop management is analysed in order to assess the importance of climate on the variability of wheat health. Wheat health is represented by the multiple pathosystem involving five components: leaf rust, yellow rust, fusarium head blight, powdery mildew, and septoria tritici blotch. An overall framework of associations between multiple diseases and climate variables is developed. This framework involves disease levels in a binary form (i.e. epidemic vs. non-epidemic) and synthesis variables accounting for climate over spring and early summer. The multiple disease-climate pattern of associations of this framework conforms to disease-specific knowledge of climate effects on the components of the pathosystem. It also concurs with a (climate-based) risk factor approach to wheat diseases. This report emphasizes the value of large scale data in crop health assessment and the usefulness of a risk factor approach for both tactical and strategic decisions for crop health management. |
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0929-1873 1573-8469 |
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CropM |
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CropMwp;wos; ftnot_macsur; |
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MA @ admin @ |
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4755 |
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Minet, J.; Laloy, E.; Tychon, B.; François, L. |
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Title |
Bayesian inversions of a dynamic vegetation model at four European grassland sites |
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Journal Article |
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2015 |
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Biogeosciences |
Abbreviated Journal |
Biogeosciences |
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12 |
Issue |
9 |
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2809-2829 |
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Keywords |
eddy-covariance data; terrestrial ecosystem model; bioclimatic affinity; groups; monte-carlo-simulation; dry-matter content; leaf-area; climate-change; stomatal conductance; parameter-estimation; plant |
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Eddy covariance data from four European grassland sites are used to probabilistically invert the CARAIB (CARbon Assimilation In the Biosphere) dynamic vegetation model (DVM) with 10 unknown parameters, using the DREAM((ZS)) (DiffeRential Evolution Adaptive Metropolis) Markov chain Monte Carlo (MCMC) sampler. We focus on comparing model inversions, considering both homoscedastic and heteroscedastic eddy covariance residual errors, with variances either fixed a priori or jointly inferred together with the model parameters. Agreements between measured and simulated data during calibration are comparable with previous studies, with root mean square errors (RMSEs) of simulated daily gross primary productivity (GPP), ecosystem respiration (RECO) and evapotranspiration (ET) ranging from 1.73 to 2.19, 1.04 to 1.56 g C m(-2) day(-1) and 0.50 to 1.28 mm day(-1), respectively. For the calibration period, using a homoscedastic eddy covariance residual error model resulted in a better agreement between measured and modelled data than using a heteroscedastic residual error model. However, a model validation experiment showed that CARAIB models calibrated considering heteroscedastic residual errors perform better. Posterior parameter distributions derived from using a heteroscedastic model of the residuals thus appear to be more robust. This is the case even though the classical linear heteroscedastic error model assumed herein did not fully remove heteroscedasticity of the GPP residuals. Despite the fact that the calibrated model is generally capable of fitting the data within measurement errors, systematic bias in the model simulations are observed. These are likely due to model inadequacies such as shortcomings in the photosynthesis modelling. Besides the residual error treatment, differences between model parameter posterior distributions among the four grassland sites are also investigated. It is shown that the marginal distributions of the specific leaf area and characteristic mortality time parameters can be explained by site-specific ecophysiological characteristics. |
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1726-4189 |
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CropM LiveM, ft_macsur |
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MA @ admin @ |
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4571 |
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Bressan, R.A.; Park, H.C.; Orsini, F.; Oh, D.-ha; Dassanayake, M.; Inan, G.; Yun, D.-J.; Bohnert, H.J.; Maggio, A. |
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Biotechnology for mechanisms that counteract salt stress in extremophile species: a genome-based view |
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Journal Article |
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2013 |
Publication |
Plant Biotechnology Reports |
Abbreviated Journal |
Plant Biotechnol. Rep. |
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7 |
Issue |
1 |
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27-37 |
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Keywords |
Thellungiella; Extremophile species; Genome sequences; Abiotic stress; protection; Biotechnology potential; arabidopsis-thaliana; thellungiella-halophila; salinity stress; whole-genome; gene-expression; water-content; model system; tolerance; halophytes |
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Molecular genetics has confirmed older research and generated new insights into the ways how plants deal with adverse conditions. This body of research is now being used to interpret stress behavior of plants in new ways, and to add results from most recent genomics-based studies. The new knowledge now includes genome sequences of species that show extreme abiotic stress tolerances, which enables new strategies for applications through either molecular breeding or transgenic engineering. We will highlight some physiological features of the extremophile lifestyle, outline emerging features about halophytism based on genomics, and discuss conclusions about underlying mechanisms. |
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1863-5466 1863-5474 |
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Review |
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CropM |
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MA @ admin @ |
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4483 |
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