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Author |
Minet, J.; Laloy, E.; Tychon, B.; François, L. |
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Title  |
Bayesian inversions of a dynamic vegetation model at four European grassland sites |
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Journal Article |
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Year |
2015 |
Publication |
Biogeosciences |
Abbreviated Journal |
Biogeosciences |
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Volume |
12 |
Issue |
9 |
Pages |
2809-2829 |
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Keywords |
eddy-covariance data; terrestrial ecosystem model; bioclimatic affinity; groups; monte-carlo-simulation; dry-matter content; leaf-area; climate-change; stomatal conductance; parameter-estimation; plant |
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Abstract |
Eddy covariance data from four European grassland sites are used to probabilistically invert the CARAIB (CARbon Assimilation In the Biosphere) dynamic vegetation model (DVM) with 10 unknown parameters, using the DREAM((ZS)) (DiffeRential Evolution Adaptive Metropolis) Markov chain Monte Carlo (MCMC) sampler. We focus on comparing model inversions, considering both homoscedastic and heteroscedastic eddy covariance residual errors, with variances either fixed a priori or jointly inferred together with the model parameters. Agreements between measured and simulated data during calibration are comparable with previous studies, with root mean square errors (RMSEs) of simulated daily gross primary productivity (GPP), ecosystem respiration (RECO) and evapotranspiration (ET) ranging from 1.73 to 2.19, 1.04 to 1.56 g C m(-2) day(-1) and 0.50 to 1.28 mm day(-1), respectively. For the calibration period, using a homoscedastic eddy covariance residual error model resulted in a better agreement between measured and modelled data than using a heteroscedastic residual error model. However, a model validation experiment showed that CARAIB models calibrated considering heteroscedastic residual errors perform better. Posterior parameter distributions derived from using a heteroscedastic model of the residuals thus appear to be more robust. This is the case even though the classical linear heteroscedastic error model assumed herein did not fully remove heteroscedasticity of the GPP residuals. Despite the fact that the calibrated model is generally capable of fitting the data within measurement errors, systematic bias in the model simulations are observed. These are likely due to model inadequacies such as shortcomings in the photosynthesis modelling. Besides the residual error treatment, differences between model parameter posterior distributions among the four grassland sites are also investigated. It is shown that the marginal distributions of the specific leaf area and characteristic mortality time parameters can be explained by site-specific ecophysiological characteristics. |
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English |
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1726-4189 |
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CropM LiveM, ft_macsur |
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MA @ admin @ |
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4571 |
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Author |
Mansouri, M.; Dumont, B.; Leemans, V.; Destain, M.-F. |
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Title |
Bayesian methods for predicting LAI and soil water content |
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Journal Article |
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Year |
2014 |
Publication |
Precision Agriculture |
Abbreviated Journal |
Precision Agric. |
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Volume |
15 |
Issue |
2 |
Pages |
184-201 |
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Keywords |
crop model; bayes; data assimilation; extended kalman filtering; particle filtering; variational filtering; leaf-area index; parameter-estimation; crop models; moisture; instruments; management; sensors; state |
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Abstract |
LAI of winter wheat (Triticum aestivum L.) and soil water content of the topsoil (200 mm) and of the subsoil (500 mm) were considered as state variables of a dynamic soil-crop system. This system was assumed to progress according to a Bayesian probabilistic state space model, in which real values of LAI and soil water content were daily introduced in order to correct the model trajectory and reach better future evolution. The chosen crop model was mini STICS which can reduce the computing and execution times while ensuring the robustness of data processing and estimation. To predict simultaneously state variables and model parameters in this non-linear environment, three techniques were used: extended Kalman filtering (EKF), particle filtering (PF), and variational filtering (VF). The significantly improved performance of the VF method when compared to EKF and PF is demonstrated. The variational filter has a low computational complexity and the convergence speed of states and parameters estimation can be adjusted independently. Detailed case studies demonstrated that the root mean square error of the three estimated states (LAI and soil water content of two soil layers) was smaller and that the convergence of all considered parameters was ensured when using VF. Assimilating measurements in a crop model allows accurate prediction of LAI and soil water content at a local scale. As these biophysical properties are key parameters in the crop-plant system characterization, the system has the potential to be used in precision farming to aid farmers and decision makers in developing strategies for site-specific management of inputs, such as fertilizers and water irrigation. |
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1385-2256 |
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CropM, ftnotmacsur |
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MA @ admin @ |
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4629 |
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Author |
Zimmermann, A.; Britz, W. |
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Title |
European farms’ participation in agri-environmental measures |
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Journal Article |
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Year |
2016 |
Publication |
Land Use Policy |
Abbreviated Journal |
Land Use Policy |
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Volume |
50 |
Issue |
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Pages |
214-228 |
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Keywords |
agri-environmental; CAP; farm; EU; estimation; protection scheme; conservation; programs; willingness; policy; perspective; adoption; ireland |
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Due to their diversity and voluntariness, agri-environmental measures (AEMs) are among the Common Agricultural Policy instruments that are most difficult to assess. We provide an EU-wide analysis of AEM adoption and farm’s total AEM support over total Utilised Agricultural Area using a Heckman sample selection approach and single farm data. Our analysis covers 22 Member States over the 2000-2009 period, assesses the entire portfolio of AEMs and focuses on the relationship between AEM participation and farming system. Results show that participation in AEMs is more likely in less intensive production systems, where, however, per committed hectare AEM premiums tend to be lower. Member States group into three categories: high/low intensity farming systems with low/high AEM enrollment rates, respectively, and large high diversity countries with medium AEM enrollment rates. (C) 2015 Elsevier Ltd. All rights reserved. |
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ISSN |
0264-8377 |
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TradeM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
4711 |
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Author |
Conradt, T.; Gornott, C.; Wechsung, F. |
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Title |
Extending and improving regionalized winter wheat and silage maize yield regression models for Germany: Enhancing the predictive skill by panel definition through cluster analysis |
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Journal Article |
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Year |
2016 |
Publication |
Agricultural and Forest Meteorology |
Abbreviated Journal |
Agricultural and Forest Meteorology |
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216 |
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Pages |
68-81 |
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Keywords |
cluster analysis; crop yield estimation; germany; multivariate regression; silage maize; winter wheat; climate-change; canadian prairies; crop yield; temperature; responses; environments; variability; cultivar; china |
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Regional agricultural yield assessments allowing for weather effect quantifications are a valuable basis for deriving scenarios of climate change effects and developing adaptation strategies. Assessing weather effects by statistical methods is a classical approach, but for obtaining robust results many details deserve attention and require individual decisions as is demonstrated in this paper. We evaluated regression models for annual yield changes of winter wheat and silage maize in more than 300 German counties and revised them to increase their predictive power. A major effort of this study was, however, aggregating separately estimated time series models (STSM) into panel data models (PDM) based on cluster analyses. The cluster analyses were based on the per-county estimates of STSM parameters. The original STSM formulations (adopted from a parallel study) contained also the non-meteorological input variables acreage and fertilizer price. The models were revised to use only weather variables as estimation basis. These consisted of time aggregates of radiation, precipitation, temperature, and potential evapotranspiration. Altering the input variables generally increased the predictive power of the models as did their clustering into PDM. For each crop, five alternative clusterings were produced by three different methods, and similarities between their spatial structures seem to confirm the existence of objective clusters about common model parameters. Observed smooth transitions of STSM parameter values in space suggest, however, spatial autocorrelation effects that could also be modeled explicitly. Both clustering and autocorrelation approaches can effectively reduce the noise in parameter estimation through targeted aggregation of input data. (C) 2015 Elsevier B.V. All rights reserved. |
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0168-1923 |
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CropM, ft_macsur |
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MA @ admin @ |
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4709 |
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Author |
Bojar, W.; Knopik, L.; Żarski, J.; Kuśmierek-Tomaszewska, R. |
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Title |
Integrated assessment of crop productivity based on the food supply forecasting |
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Journal Article |
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Year |
2016 |
Publication |
Agricultural Economics – Czech |
Abbreviated Journal |
Agricultural Economics – Czech |
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61 |
Issue |
11 |
Pages |
502-510 |
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Keywords |
climate changes; decision-making tools; estimation of parameters; forecasted outputs; gamma distribution; predicting yields; climate-change; emissions scenarios; impacts; potato; yield; growth; policy; scale; water |
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Climate change scenarios suggest that long periods without rainfall will occur in the future often causing instability of the agricultural products market. The aim of our research was to build a model describing the amount of precipitation and droughts for forecasting crop yields in the future. In this study, we analysed a non-standard mixture of gamma and one point distributions as the model of rainfall. On the basis of the rainfall data, one can estimate parameters of the distribution. Parameter estimators were constructed using a method of maximum likelihood. The obtained rainfall data allow confirming the hypothesis of the adequacy of the proposed rainfall models. Long series of droughts allow one to determine the probabilities of adverse phenomena in agriculture. Based on the model, yields of barley in the years 2030 and 2050 were forecasted which can be used for the assessment of other crops productivity. The results obtained with this approach can be used to predict decreases in agricultural production caused by prospective rainfall shortages. This will enable decision makers to shape effective agricultural policies in order to learn how to balance the food supplies and demands through an appropriate management of stored raw food materials and import/export policies. |
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ISSN |
0139-570x |
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Notes |
CropM, TradeM, ft_macsur |
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Call Number |
MA @ admin @ |
Serial |
4644 |
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