| Records |
| Author |
Bernabucci, U.; Biffani, S.; Buggiotti, L.; Vitali, A.; Lacetera, N.; Nardone, A. |
Title  |
The effects of heat stress in Italian Holstein dairy cattle |
Type |
Journal Article |
| Year |
2014 |
Publication |
Journal of Dairy Science |
Abbreviated Journal |
J. Dairy Sci. |
| Volume |
97 |
Issue |
1 |
Pages |
471-486 |
| Keywords |
Animals; Breeding; Cattle; Dietary Fats/analysis; Dietary Proteins/analysis; Female; Genetic Variation; Heat Stress Disorders/*veterinary; *Hot Temperature; Humans; Humidity; *Lactation; Linear Models; Milk/chemistry; Parity; Phenotype; Weather; dairy cow; heritability; production trait; temperature-humidity index breaking point |
| Abstract |
The data set for this study comprised 1,488,474 test-day records for milk, fat, and protein yields and fat and protein percentages from 191,012 first-, second-, and third-parity Holstein cows from 484 farms. Data were collected from 2001 through 2007 and merged with meteorological data from 35 weather stations. A linear model (M1) was used to estimate the effects of the temperature-humidity index (THI) on production traits. Least squares means from M1 were used to detect the THI thresholds for milk production in all parities by using a 2-phase linear regression procedure (M2). A multiple-trait repeatability test-model (M3) was used to estimate variance components for all traits and a dummy regression variable (t) was defined to estimate the production decline caused by heat stress. Additionally, the estimated variance components and M3 were used to estimate traditional and heat-tolerance breeding values (estimated breeding values, EBV) for milk yield and protein percentages at parity 1. An analysis of data (M2) indicated that the daily THI at which milk production started to decline for the 3 parities and traits ranged from 65 to 76. These THI values can be achieved with different temperature/humidity combinations with a range of temperatures from 21 to 36°C and relative humidity values from 5 to 95%. The highest negative effect of THI was observed 4 d before test day over the 3 parities for all traits. The negative effect of THI on production traits indicates that first-parity cows are less sensitive to heat stress than multiparous cows. Over the parities, the general additive genetic variance decreased for protein content and increased for milk yield and fat and protein yield. Additive genetic variance for heat tolerance showed an increase from the first to third parity for milk, protein, and fat yield, and for protein percentage. Genetic correlations between general and heat stress effects were all unfavorable (from -0.24 to -0.56). Three EBV per trait were calculated for each cow and bull (traditional EBV, traditional EBV estimated with the inclusion of THI covariate effect, and heat tolerance EBV) and the rankings of EBV for 283 bulls born after 1985 with at least 50 daughters were compared. When THI was included in the model, the ranking for 17 and 32 bulls changed for milk yield and protein percentage, respectively. The heat tolerance genetic component is not negligible, suggesting that heat tolerance selection should be included in the selection objectives. |
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1525-3198 (Electronic) 0022-0302 (Linking) |
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LiveM, ft_macsur |
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MA @ admin @ |
Serial |
4617 |
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| Author |
Strauss, F.; Moltchanova, E.; Schmid, E. |
| Title |
Spatially explicit modeling of long-term drought impacts on crop production in Austria |
Type |
Journal Article |
| Year |
2013 |
Publication |
American Journal of Climate Change |
Abbreviated Journal |
American Journal of Climate Change |
| Volume |
2 |
Issue |
3 |
Pages |
1-11 |
| Keywords |
Long-Term Drought Modeling; Dry Day Index; Biophysical Impacts; Spatial Variability; EPIC; Austria |
| Abstract |
Droughts have serious and widespread impacts on crop production with substantial economic losses. The frequency and severity of drought events may increase in the future due to climate change. We have developed three meteorological drought scenarios for Austria in the period 2008-2040. The scenarios are defined based on a dry day index which is combined with bootstrapping from an observed daily weather dataset of the period 1975-2007. The severity of long-term drought scenarios is characterized by lower annual and seasonal precipitation amounts as well as more sig- nificant temperature increases compared to the observations. The long-term impacts of the drought scenarios on Aus- trian crop production have been analyzed with the biophysical process model EPIC (Environmental Policy Integrated Climate). Our simulation outputs show that—for areas with historical mean annual precipitation sums below 850 mm— already slight increases in dryness result in significantly lower crop yields i.e. depending on the drought severity, be- tween 0.6% and 0.9% decreases in mean annual dry matter crop yields per 1.0% decrease in mean annual precipitation sums. The EPIC results of more severe droughts show that spring and summer precipitation may become a limiting factor in crop production even in regions with historical abundant precipitation. |
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2167-9495 |
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CropM, ft_macsur |
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no |
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MA @ admin @ |
Serial |
4507 |
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Jing, Q.; Bélanger, G.; Baron, V.; Bonesmo, H.; Virkajärvi, P.; Young, D. |
| Title |
Regrowth simulation of the perennial grass timothy |
Type |
Journal Article |
| Year |
2012 |
Publication |
Ecological Modelling |
Abbreviated Journal |
Ecol. Model. |
| Volume |
232 |
Issue |
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Pages |
64-77 |
| Keywords |
biomass; carbohydrate; leaf area index; n uptake; reserve-dependent growth; temperature; nutritive-value; carbohydrate reserves; phleum-pratense; catimo model; leaf-area; nitrogen-fertilization; spring harvest; meadow fescue; tall fescue; growth |
| Abstract |
Several process-based models for simulating the growth of perennial grasses have been developed but few include the simulation of regrowth. The model CATIMO simulates the primary growth of timothy (Phleum pratense L), an important perennial forage grass species in northern regions of Europe and North America. Our objective was to further develop the model CATIMO to simulate timothy regrowth using the concept of reserve-dependent growth. The performance of this modified CATIMO model in simulating leaf area index (LAI), biomass dry matter (DM) yield, and N uptake of regrowth was assessed with data from four independent field experiments in Norway, Finland, and western and eastern Canada using an approach that combines graphical comparison and statistical analysis. Biomass DM yield and N uptake of regrowth were predicted at the same accuracy as primary growth with linear regression coefficients of determination between measured and simulated values greater than 0.79, model simulation efficiencies greater than 0.78, and normalized root mean square errors (14-30% for biomass and 24-34% for N uptake) comparable with the coefficients of variation of measured data (1-21% for biomass and 1-25% for N uptake). The model satisfactorily simulated the regrowth LAI but only up to a value of about 4.0. The modified CATIMO model with its capacity to simulate regrowth provides a framework to simulate perennial grasses with multiple harvests, and to explore management options for sustainable grass production under different environmental conditions. Crown Copyright (C) 2012 Published by Elsevier B.V. All rights reserved. |
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| ISSN |
0304-3800 |
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CropM, LiveM |
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no |
| Call Number |
MA @ admin @ |
Serial |
4473 |
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Ferrise, R.; Toscano, P.; Pasqui, M.; Moriondo, M.; Primicerio, J.; Semenov, M.A.; Bindi, M. |
| Title |
Monthly-to-seasonal predictions of durum wheat yield over the Mediterranean Basin |
Type |
Journal Article |
| Year |
2015 |
Publication |
Climate Research |
Abbreviated Journal |
Clim. Res. |
| Volume |
65 |
Issue |
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Pages |
7-21 |
| Keywords |
yield predictions; seasonal forecasts; analogue forecasts; stochastic weather generator; empirical forecasting models; durum wheat; crop modelling; mediterranean basin; general-circulation model; scale climate indexes; crop yield; grain-yield; forecasts; simulation; region; precipitation; australia; europe |
| Abstract |
Uncertainty in weather conditions for the forthcoming growing season influences farmers’ decisions, based on their experience of the past climate, regarding the reduction of agricultural risk. Early within-season predictions of grain yield can represent a great opportunity for farmers to improve their management decisions and potentially increase yield and reduce potential risk. This study assessed 3 methods of within-season predictions of durum wheat yield at 10 sites across the Mediterranean Basin. To assess the value of within-season predictions, the model SiriusQuality2 was used to calculate wheat yields over a 9 yr period. Initially, the model was run with observed daily weather to obtain the reference yields. Then, yield predictions were calculated at a monthly time step, starting from 6 mo before harvest, by feeding the model with observed weather from the beginning of the growing season until a specific date and then with synthetic weather constructed using the 3 methods, historical, analogue or empirical, until the end of the growing season. The results showed that it is possible to predict durum wheat yield over the Mediterranean Basin with an accuracy of normalized root means squared error of <20%, from 5 to 6 mo earlier for the historical and empirical methods and 3 mo earlier for the analogue method. Overall, the historical method performed better than the others. Nonetheless, the analogue and empirical methods provided better estimations for low-yielding and high-yielding years, thus indicating great potential to provide more accurate predictions for years that deviate from average conditions. |
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English |
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0936-577x 1616-1572 |
ISBN |
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Article |
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CropM, ft_macsur |
Approved |
no |
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MA @ admin @ |
Serial |
4696 |
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| Author |
Mansouri, M.; Dumont, B.; Destain, M.-F. |
| Title |
Modeling and prediction of nonlinear environmental system using Bayesian methods |
Type |
Journal Article |
| Year |
2013 |
Publication |
Computers and Electronics in Agriculture |
Abbreviated Journal |
Computers and Electronics in Agriculture |
| Volume |
92 |
Issue |
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Pages |
16-31 |
| Keywords |
state and parameter estimation; variational filter; particle filter; extended kalman filter; nonlinear environmental system; leaf area index and soil moisture model; extended kalman filter; state-space models; parameter-estimation; particle filters; navigation; tutorial; tracking |
| Abstract |
An environmental dynamic system is usually modeled as a nonlinear system described by a set of nonlinear ODEs. A central challenge in computational modeling of environmental systems is the determination of the model parameters. In these cases, estimating these variables or parameters from other easily obtained measurements can be extremely useful. This work addresses the problem of monitoring and modeling a leaf area index and soil moisture model (LSM) using state estimation. The performances of various conventional and state-of-the-art state estimation techniques are compared when they are utilized to achieve this objective. These techniques include the extended Kalman filter (EKF), particle filter (PF), and the more recently developed technique variational filter (VF). Specifically, two comparative studies are performed. In the first comparative study, the state variables (the leaf-area index LAI, the volumetric water content of the soil layer 1, HUR1 and the volumetric water content of the soil layer 2, HUR2) are estimated from noisy measurements of these variables, and the various estimation techniques are compared by computing the estimation root mean square error (RMSE) with respect to the noise-free data. In the second comparative study, the state variables as well as the model parameters are simultaneously estimated. In this case, in addition to comparing the performances of the various state estimation techniques, the effect of number of estimated model parameters on the accuracy and convergence of these techniques are also assessed. The results of both comparative studies show that the PF provides a higher accuracy than the EKF, which is due to the limited ability of the EKF to handle highly nonlinear processes. The results also show that the VF provides a significant improvement over the PF because, unlike the PF which depends on the choice of sampling distribution used to estimate the posterior distribution, the VF yields an optimum choice of the sampling distribution, which also accounts for the observed data. The results of the second comparative study show that, for all techniques, estimating more model parameters affects the estimation accuracy as well as the convergence of the estimated states and parameters. However, the VF can still provide both convergence as well as accuracy related advantages over other estimation methods. (C) 2013 Elsevier B.V. All rights reserved. |
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English |
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0168-1699 |
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CropM |
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MA @ admin @ |
Serial |
4495 |
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